Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8035N08.5
        

               Conread position:
               188-465
               

               Cow position:
               chr18:21731774-21732055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               48, 24
               

               Conread position:
               190-428
               

               Cow position:
               chr18:9563381-9563622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               118, 40
               

               Conread position:
               231-469
               

               Cow position:
               chr18:8523489-8523726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               67, 130
               

               Conread position:
               233-418
               

               Cow position:
               chr18:5909385-5909575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               233-428
               

               Cow position:
               chr18:23100764-23100964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               65, 120
               

               Conread position:
               233-469
               

               Cow position:
               chr18:51141467-51141706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 178
               

               Conread position:
               240-432
               

               Cow position:
               chr18:5612881-5612685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               59, 115
               

               Conread position:
               307-465
               

               Cow position:
               chr18:34270512-34270672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               33, 125
               
Show alignments to all cow chromosomes.