Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8035N08.5
        

               Conread position:
               188-468
               

               Cow position:
               chr21:39591907-39591639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               141, 47
               

               Conread position:
               188-469
               

               Cow position:
               chr21:34760270-34760551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               110, 35
               

               Conread position:
               190-449
               

               Cow position:
               chr21:687345-687600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               109, 38
               

               Conread position:
               193-391
               

               Cow position:
               chr21:7414649-7414837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               106, 35
               

               Conread position:
               195-464
               

               Cow position:
               chr21:29004440-29004707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               104, 28
               

               Conread position:
               196-412
               

               Cow position:
               chr21:35677300-35677092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               105, 27
               

               Conread position:
               221-464
               

               Cow position:
               chr21:26150096-26149845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               101, 15
               

               Conread position:
               233-461
               

               Cow position:
               chr21:25332420-25332653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               233-461
               

               Cow position:
               chr21:29965086-29965314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 13
               

               Conread position:
               235-478
               

               Cow position:
               chr21:35053407-35053161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               55, 184
               

               Conread position:
               236-460
               

               Cow position:
               chr21:6573183-6572955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               20, 25
               

               Conread position:
               239-407
               

               Cow position:
               chr21:39653061-39652891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 112
               
Show alignments to all cow chromosomes.