Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8035N08.5
        

               Conread position:
               190-438
               

               Cow position:
               chr28:16442822-16443060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 30
               

               Conread position:
               193-438
               

               Cow position:
               chr28:25153357-25153113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               65, 48
               

               Conread position:
               193-454
               

               Cow position:
               chr28:8762034-8762274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               163, 41
               

               Conread position:
               215-426
               

               Cow position:
               chr28:11082040-11081831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               40, 15
               

               Conread position:
               230-477
               

               Cow position:
               chr28:12371210-12371459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               104, 45
               

               Conread position:
               233-423
               

               Cow position:
               chr28:906599-906789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               77, 31
               

               Conread position:
               233-469
               

               Cow position:
               chr28:33316594-33316345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               68, 47
               

               Conread position:
               235-432
               

               Cow position:
               chr28:8910503-8910302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               62, 162
               

               Conread position:
               242-437
               

               Cow position:
               chr28:27824456-27824256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               56, 171
               

               Conread position:
               260-424
               

               Cow position:
               chr28:9235047-9235216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               39, 0
               
Show alignments to all cow chromosomes.