Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8036F13.3
        

               Conread position:
               1-107
               

               Cow position:
               chr1:22122201-22122098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               109-231
               

               Cow position:
               chr1:22116593-22116471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               228-358
               

               Cow position:
               chr1:22115378-22115248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               357-462
               

               Cow position:
               chr1:22104519-22104414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               460-565
               

               Cow position:
               chr1:22101172-22101067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               561-724
               

               Cow position:
               chr1:22100353-22100190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               145
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               912-1378
               

               Cow position:
               chr1:22096322-22095853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 240
               
Show alignments to all cow chromosomes.