Cow genome map

Conread name: Ss1.1-Pig4-TMW8036G13.5

Conread position: 1184-1332
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 38

Conread position: 1187-1410
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 147, 28

Conread position: 1194-1416
Cow position:
Alignm length: 228
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 92

Conread position: 1194-1416
Cow position:
Alignm length: 223
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1196-1394
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 55, 171

Conread position: 1196-1403
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 69

Conread position: 1196-1409
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 172, 25

Conread position: 1197-1409
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 52

Conread position: 1197-1409
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 54, 0

Conread position: 1198-1339
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 61

Conread position: 1199-1389
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 1199-1409
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 54, 95

Conread position: 1199-1412
Cow position:
Alignm length: 216
Alignm identity: 163
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 108, 51

Conread position: 1199-1416
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 135, 62

Conread position: 1199-1416
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 135, 27

Conread position: 1199-1416
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 51, 0

Conread position: 1199-1416
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 1199-1416
Cow position:
Alignm length: 219
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 31

Conread position: 1200-1376
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 160, 21

Conread position: 1200-1412
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 133, 21

Conread position: 1200-1412
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 134, 21

Conread position: 1200-1416
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 142, 28

Conread position: 1200-1416
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 70, 0

Conread position: 1200-1416
Cow position:
Alignm length: 217
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 1200-1416
Cow position:
Alignm length: 217
Alignm identity: 165
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 42, 0

Conread position: 1200-1416
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 70, 21

Conread position: 1201-1374
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 20

Conread position: 1201-1406
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 80

Conread position: 1201-1416
Cow position:
Alignm length: 217
Alignm identity: 168
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 51

Conread position: 1201-1416
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 47, 21

Conread position: 1202-1416
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 99, 204

Conread position: 1203-1360
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 53

Conread position: 1203-1408
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 1203-1410
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 18, 0

Conread position: 1203-1416
Cow position:
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 1203-1416
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 69, 0

Conread position: 1204-1372
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 157, 47

Conread position: 1204-1409
Cow position:
Alignm length: 207
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 86, 58

Conread position: 1204-1416
Cow position:
Alignm length: 213
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 1204-1416
Cow position:
Alignm length: 213
Alignm identity: 167
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 17, 0

Conread position: 1205-1372
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 1205-1413
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 113, 77

Conread position: 1205-1416
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 78, 0

Conread position: 1206-1410
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 86, 13

Conread position: 1206-1413
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 159, 0

Conread position: 1206-1416
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 129, 22

Conread position: 1207-1369
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 1208-1411
Cow position:
Alignm length: 206
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1208-1416
Cow position:
Alignm length: 211
Alignm identity: 164
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 15, 0

Conread position: 1208-1416
Cow position:
Alignm length: 209
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 1208-1416
Cow position:
Alignm length: 210
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 122

Conread position: 1208-1416
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 122

Conread position: 1209-1416
Cow position:
Alignm length: 208
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 1209-1416
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 75

Conread position: 1209-1416
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 193, 12

Conread position: 1210-1402
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 124, 19

Conread position: 1210-1410
Cow position:
Alignm length: 201
Alignm identity: 161
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 11, 0

Conread position: 1211-1416
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 36

Conread position: 1212-1377
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 100, 0

Conread position: 1213-1412
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 133, 153

Conread position: 1214-1416
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 120, 14

Conread position: 1215-1364
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 6

Conread position: 1215-1369
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 1215-1371
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 153, 0

Conread position: 1215-1374
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 153, 36

Conread position: 1215-1374
Cow position:
Alignm length: 160
Alignm identity: 130
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 6, 0

Conread position: 1215-1376
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 119, 0

Conread position: 1215-1381
Cow position:
Alignm length: 167
Alignm identity: 133
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 1215-1391
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 111, 6

Conread position: 1215-1399
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 119, 154

Conread position: 1215-1400
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 65

Conread position: 1215-1410
Cow position:
Alignm length: 198
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 11, 68

Conread position: 1215-1410
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 1215-1411
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 1215-1412
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 92, 104

Conread position: 1215-1412
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 119, 13

Conread position: 1215-1413
Cow position:
Alignm length: 199
Alignm identity: 137
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 1215-1416
Cow position:
Alignm length: 202
Alignm identity: 150
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 85, 0

Conread position: 1215-1416
Cow position:
Alignm length: 202
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 1215-1416
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 36

Conread position: 1215-1416
Cow position:
Alignm length: 202
Alignm identity: 150
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 1215-1416
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 1216-1391
Cow position:
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 119, 60

Conread position: 1216-1416
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 118, 5

Conread position: 1216-1416
Cow position:
Alignm length: 201
Alignm identity: 156
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 1216-1416
Cow position:
Alignm length: 201
Alignm identity: 158
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 159, 0

Conread position: 1221-1400
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 35

Conread position: 1221-1409
Cow position:
Alignm length: 190
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 90

Conread position: 1221-1411
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 127, 139

Conread position: 1221-1412
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 114, 148

Conread position: 1221-1416
Cow position:
Alignm length: 197
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 69, 28

Conread position: 1221-1416
Cow position:
Alignm length: 200
Alignm identity: 152
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 112, 29

Conread position: 1222-1380
Cow position:
Alignm length: 159
Alignm identity: 125
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 1222-1393
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 6, 0

Conread position: 1222-1411
Cow position:
Alignm length: 190
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 1224-1416
Cow position:
Alignm length: 193
Alignm identity: 155
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 13, 0

Conread position: 1228-1399
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 5

Conread position: 1228-1400
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 1228-1416
Cow position:
Alignm length: 189
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 23, 0

Conread position: 1229-1409
Cow position:
Alignm length: 182
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 1229-1416
Cow position:
Alignm length: 188
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1231-1414
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 1231-1416
Cow position:
Alignm length: 192
Alignm identity: 154
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 145, 9

Conread position: 1231-1416
Cow position:
Alignm length: 189
Alignm identity: 150
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 130, 20

Conread position: 1234-1414
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 126, 95

Conread position: 1240-1416
Cow position:
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 1243-1416
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 1244-1411
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 48, 122

Conread position: 1244-1413
Cow position:
Alignm length: 171
Alignm identity: 136
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 8, 73

Conread position: 1244-1416
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 126

Conread position: 1246-1410
Cow position:
Alignm length: 165
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 1247-1416
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 1247-1416
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 6, 12

Conread position: 1248-1369
Cow position:
Alignm length: 122
Alignm identity: 102
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 1250-1416
Cow position:
Alignm length: 169
Alignm identity: 133
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 64, 43

Conread position: 1251-1416
Cow position:
Alignm length: 166
Alignm identity: 136
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 161, 0

Conread position: 1251-1416
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 1252-1391
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 44

Conread position: 1253-1414
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 30

Conread position: 1254-1415
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 88, 38

Conread position: 1254-1416
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 80, 62

Conread position: 1263-1415
Cow position:
Alignm length: 154
Alignm identity: 125
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 107, 145

Conread position: 1264-1398
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 52

Conread position: 1267-1403
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 1273-1410
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1274-1413
Cow position:
Alignm length: 140
Alignm identity: 116
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 1280-1405
Cow position:
Alignm length: 127
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 1280-1413
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 56, 69

Conread position: 1294-1412
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1295-1416
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 1298-1416
Cow position:
Alignm length: 122
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 24

Conread position: 1298-1416
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 1310-1416
Cow position:
Alignm length: 107
Alignm identity: 89
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1318-1413
Cow position:
Alignm length: 96
Alignm identity: 80
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1319-1400
Cow position:
Alignm length: 82
Alignm identity: 74
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.