Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8036G13.5
        

               Conread position:
               1190-1394
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               19, 6
               

               Conread position:
               1192-1414
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               190, 29
               

               Conread position:
               1194-1388
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1195-1416
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               23, 72
               

               Conread position:
               1196-1413
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1197-1391
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               74, 180
               

               Conread position:
               1197-1398
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               27, 86
               

               Conread position:
               1198-1395
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               32, 84
               

               Conread position:
               1199-1410
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               17, 58
               

               Conread position:
               1199-1413
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               1199-1416
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               26, 173
               

               Conread position:
               1200-1355
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               135, 21
               

               Conread position:
               1200-1416
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               1200-1416
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               28, 45
               

               Conread position:
               1201-1335
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               1201-1390
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 31
               

               Conread position:
               1201-1392
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1201-1412
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               21, 55
               

               Conread position:
               1202-1414
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               17, 64
               

               Conread position:
               1203-1412
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1203-1412
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               59, 18
               

               Conread position:
               1203-1416
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               99, 120
               

               Conread position:
               1203-1416
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1204-1372
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               152, 22
               

               Conread position:
               1204-1404
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               78, 111
               

               Conread position:
               1204-1415
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               31, 20
               

               Conread position:
               1205-1410
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               128, 17
               

               Conread position:
               1205-1412
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               69, 16
               

               Conread position:
               1206-1395
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               94, 16
               

               Conread position:
               1206-1410
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               128, 41
               

               Conread position:
               1206-1411
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               1206-1416
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1207-1412
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               1208-1407
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1208-1411
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               59, 75
               

               Conread position:
               1208-1412
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               77, 105
               

               Conread position:
               1208-1413
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1208-1416
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1208-1416
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               163
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1209-1416
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               121, 162
               

               Conread position:
               1210-1413
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1210-1416
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 11
               

               Conread position:
               1210-1416
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               127, 82
               

               Conread position:
               1211-1412
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               191, 42
               

               Conread position:
               1211-1412
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               191, 42
               

               Conread position:
               1212-1412
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               121, 68
               

               Conread position:
               1212-1416
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               1214-1401
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               25, 153
               

               Conread position:
               1214-1412
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               160
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               162, 7
               

               Conread position:
               1215-1367
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               119, 6
               

               Conread position:
               1215-1407
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               176, 6
               

               Conread position:
               1215-1412
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               92, 6
               

               Conread position:
               1215-1412
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               92, 65
               

               Conread position:
               1215-1413
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               77, 13
               

               Conread position:
               1215-1414
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               121, 28
               

               Conread position:
               1216-1396
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1216-1416
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1218-1403
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               102, 80
               

               Conread position:
               1220-1409
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1221-1416
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               149, 96
               

               Conread position:
               1221-1416
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               1222-1408
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               111, 6
               

               Conread position:
               1222-1415
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               33, 91
               

               Conread position:
               1224-1400
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               110, 5
               

               Conread position:
               1227-1416
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               68, 17
               

               Conread position:
               1227-1416
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               1227-1416
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1228-1369
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1228-1416
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               27, 48
               

               Conread position:
               1229-1373
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               105, 15
               

               Conread position:
               1229-1411
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1231-1404
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1236-1416
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 17
               

               Conread position:
               1239-1388
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               1240-1416
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1243-1369
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 114
               

               Conread position:
               1244-1409
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               1245-1407
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               137
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               1248-1416
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1254-1401
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               44, 112
               

               Conread position:
               1254-1412
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1270-1397
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               93, 0
               
Show alignments to all cow chromosomes.