Cow genome map

Conread name: Ss1.1-Pig4-TMW8036G13.5

Conread position: 1164-1416
Cow position:
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 129

Conread position: 1187-1402
Cow position:
Alignm length: 216
Alignm identity: 165
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 34, 0

Conread position: 1188-1391
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 147, 26

Conread position: 1190-1416
Cow position:
Alignm length: 227
Alignm identity: 167
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 43, 0

Conread position: 1194-1371
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 28, 100

Conread position: 1195-1382
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 1195-1414
Cow position:
Alignm length: 223
Alignm identity: 165
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 18, 0

Conread position: 1196-1416
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 27

Conread position: 1197-1369
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 1197-1416
Cow position:
Alignm length: 221
Alignm identity: 170
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 136, 17

Conread position: 1198-1375
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 57

Conread position: 1198-1412
Cow position:
Alignm length: 217
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 160

Conread position: 1198-1412
Cow position:
Alignm length: 216
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 136, 82

Conread position: 1198-1416
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 87, 145

Conread position: 1199-1392
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 125, 98

Conread position: 1199-1400
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 24, 53

Conread position: 1199-1413
Cow position:
Alignm length: 215
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 1199-1416
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 1199-1416
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 22, 0

Conread position: 1199-1416
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 1199-1416
Cow position:
Alignm length: 221
Alignm identity: 173
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 24, 57

Conread position: 1200-1412
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 134, 21

Conread position: 1200-1416
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 52, 22

Conread position: 1201-1388
Cow position:
Alignm length: 188
Alignm identity: 146
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 165, 0

Conread position: 1201-1412
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 27

Conread position: 1202-1391
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 157, 127

Conread position: 1202-1406
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 97

Conread position: 1202-1415
Cow position:
Alignm length: 215
Alignm identity: 157
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 49, 19

Conread position: 1203-1336
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 49

Conread position: 1203-1397
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 48, 0

Conread position: 1203-1406
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 1204-1403
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 120

Conread position: 1204-1413
Cow position:
Alignm length: 213
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 50

Conread position: 1204-1414
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 1205-1406
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 129, 24

Conread position: 1205-1408
Cow position:
Alignm length: 205
Alignm identity: 165
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 127, 17

Conread position: 1205-1411
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 43

Conread position: 1205-1414
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 1205-1415
Cow position:
Alignm length: 211
Alignm identity: 164
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 21, 0

Conread position: 1206-1415
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 12, 107

Conread position: 1207-1409
Cow position:
Alignm length: 203
Alignm identity: 155
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 0

Conread position: 1207-1416
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 1207-1416
Cow position:
Alignm length: 211
Alignm identity: 165
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 127, 14

Conread position: 1207-1416
Cow position:
Alignm length: 212
Alignm identity: 169
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 46

Conread position: 1208-1347
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 1208-1375
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 7, 86

Conread position: 1208-1402
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 104, 0

Conread position: 1208-1412
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 1208-1416
Cow position:
Alignm length: 209
Alignm identity: 156
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 152, 0

Conread position: 1209-1414
Cow position:
Alignm length: 207
Alignm identity: 157
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 10, 142

Conread position: 1210-1380
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 1210-1404
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 1210-1416
Cow position:
Alignm length: 208
Alignm identity: 155
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 99, 11

Conread position: 1210-1416
Cow position:
Alignm length: 207
Alignm identity: 156
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 61, 0

Conread position: 1211-1399
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 1211-1416
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 0

Conread position: 1212-1412
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 69, 105

Conread position: 1213-1413
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 1214-1384
Cow position:
Alignm length: 171
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 1214-1401
Cow position:
Alignm length: 190
Alignm identity: 147
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 37, 42

Conread position: 1215-1349
Cow position:
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 1215-1369
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 6

Conread position: 1215-1369
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 1215-1372
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 6

Conread position: 1215-1384
Cow position:
Alignm length: 172
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 92, 96

Conread position: 1215-1398
Cow position:
Alignm length: 185
Alignm identity: 143
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 153, 121

Conread position: 1215-1403
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 96, 33

Conread position: 1215-1404
Cow position:
Alignm length: 190
Alignm identity: 148
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 1215-1404
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 1215-1412
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 92, 54

Conread position: 1215-1415
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 1215-1416
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 1215-1416
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 188, 99

Conread position: 1215-1416
Cow position:
Alignm length: 202
Alignm identity: 153
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 13, 0

Conread position: 1215-1416
Cow position:
Alignm length: 202
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 149, 0

Conread position: 1215-1416
Cow position:
Alignm length: 202
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1215-1416
Cow position:
Alignm length: 202
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 6, 0

Conread position: 1215-1416
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 66, 0

Conread position: 1215-1416
Cow position:
Alignm length: 203
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 119, 6

Conread position: 1216-1416
Cow position:
Alignm length: 202
Alignm identity: 150
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 152, 5

Conread position: 1221-1414
Cow position:
Alignm length: 194
Alignm identity: 153
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 1221-1416
Cow position:
Alignm length: 197
Alignm identity: 153
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 115, 32

Conread position: 1222-1412
Cow position:
Alignm length: 193
Alignm identity: 142
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 83, 6

Conread position: 1222-1412
Cow position:
Alignm length: 192
Alignm identity: 145
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 111, 0

Conread position: 1222-1416
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 52

Conread position: 1229-1387
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 105, 40

Conread position: 1229-1416
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 1230-1408
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 50

Conread position: 1230-1414
Cow position:
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 1232-1416
Cow position:
Alignm length: 186
Alignm identity: 146
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 98, 65

Conread position: 1233-1359
Cow position:
Alignm length: 128
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 64

Conread position: 1241-1406
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 1242-1416
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 106

Conread position: 1246-1406
Cow position:
Alignm length: 166
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 28, 8

Conread position: 1250-1416
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 1252-1397
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 1253-1412
Cow position:
Alignm length: 160
Alignm identity: 128
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 110, 0

Conread position: 1255-1380
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1255-1391
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 1255-1406
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 1255-1416
Cow position:
Alignm length: 163
Alignm identity: 133
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 36, 111

Conread position: 1259-1413
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 33

Conread position: 1259-1416
Cow position:
Alignm length: 158
Alignm identity: 130
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 121, 0

Conread position: 1261-1412
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 73, 133

Conread position: 1273-1412
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 1274-1391
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1274-1414
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 1279-1416
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 1280-1416
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 1282-1416
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 1283-1416
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 82

Conread position: 1284-1413
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 39

Conread position: 1309-1409
Cow position:
Alignm length: 101
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 1314-1416
Cow position:
Alignm length: 103
Alignm identity: 88
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 1319-1411
Cow position:
Alignm length: 93
Alignm identity: 82
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.