Cow genome map

Conread name: Ss1.1-Pig4-TMW8036G13.5

Conread position: 1181-1416
Cow position:
Alignm length: 240
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 38

Conread position: 1184-1402
Cow position:
Alignm length: 222
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 122

Conread position: 1184-1413
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 33, 70

Conread position: 1187-1368
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 1191-1386
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 110, 30

Conread position: 1193-1412
Cow position:
Alignm length: 225
Alignm identity: 158
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 58, 63

Conread position: 1195-1413
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 1196-1416
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 1197-1374
Cow position:
Alignm length: 178
Alignm identity: 138
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 1198-1357
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 53, 58

Conread position: 1198-1397
Cow position:
Alignm length: 202
Alignm identity: 153
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 102, 17

Conread position: 1198-1403
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 53, 58

Conread position: 1198-1416
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 135, 159

Conread position: 1198-1416
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 62

Conread position: 1198-1416
Cow position:
Alignm length: 221
Alignm identity: 165
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 19, 66

Conread position: 1199-1356
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 1199-1364
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 26, 96

Conread position: 1199-1392
Cow position:
Alignm length: 198
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 17, 170

Conread position: 1199-1397
Cow position:
Alignm length: 199
Alignm identity: 152
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 22, 0

Conread position: 1199-1411
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 109, 22

Conread position: 1199-1412
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 135, 43

Conread position: 1199-1416
Cow position:
Alignm length: 219
Alignm identity: 161
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 23, 149

Conread position: 1200-1379
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 44, 66

Conread position: 1200-1410
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 49, 0

Conread position: 1200-1413
Cow position:
Alignm length: 214
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 55, 0

Conread position: 1200-1416
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 0

Conread position: 1201-1416
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 14, 21

Conread position: 1201-1416
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 130, 20

Conread position: 1202-1391
Cow position:
Alignm length: 190
Alignm identity: 145
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 1202-1416
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 28, 0

Conread position: 1203-1386
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 164

Conread position: 1203-1416
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 131, 18

Conread position: 1204-1412
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 81, 17

Conread position: 1205-1412
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 16

Conread position: 1205-1412
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 102, 106

Conread position: 1205-1416
Cow position:
Alignm length: 212
Alignm identity: 162
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 16, 0

Conread position: 1205-1416
Cow position:
Alignm length: 213
Alignm identity: 171
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 83, 16

Conread position: 1206-1347
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 128, 15

Conread position: 1206-1416
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 66, 0

Conread position: 1208-1365
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 1208-1380
Cow position:
Alignm length: 173
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 1208-1390
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 180, 20

Conread position: 1208-1394
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 1208-1416
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1209-1409
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 51

Conread position: 1210-1374
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 43

Conread position: 1210-1416
Cow position:
Alignm length: 209
Alignm identity: 160
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 21, 31

Conread position: 1211-1412
Cow position:
Alignm length: 204
Alignm identity: 153
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 10, 52

Conread position: 1212-1416
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 1214-1416
Cow position:
Alignm length: 204
Alignm identity: 158
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 78, 56

Conread position: 1215-1358
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 1215-1362
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1215-1367
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 6

Conread position: 1215-1369
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 1215-1371
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 115, 67

Conread position: 1215-1403
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 101, 0

Conread position: 1215-1411
Cow position:
Alignm length: 200
Alignm identity: 156
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 20, 54

Conread position: 1215-1411
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 1215-1416
Cow position:
Alignm length: 206
Alignm identity: 159
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 18, 0

Conread position: 1215-1416
Cow position:
Alignm length: 202
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1216-1416
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 149, 0

Conread position: 1216-1416
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 123, 0

Conread position: 1217-1412
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 1218-1416
Cow position:
Alignm length: 205
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 118, 52

Conread position: 1221-1397
Cow position:
Alignm length: 178
Alignm identity: 125
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 113, 149

Conread position: 1221-1414
Cow position:
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 1221-1416
Cow position:
Alignm length: 197
Alignm identity: 152
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 133, 0

Conread position: 1221-1416
Cow position:
Alignm length: 198
Alignm identity: 157
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 24, 31

Conread position: 1222-1369
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 89

Conread position: 1222-1390
Cow position:
Alignm length: 169
Alignm identity: 131
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 1227-1415
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 89

Conread position: 1228-1377
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 79, 83

Conread position: 1228-1392
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 1228-1405
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 173, 137

Conread position: 1228-1416
Cow position:
Alignm length: 189
Alignm identity: 147
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 57, 0

Conread position: 1229-1398
Cow position:
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 0

Conread position: 1229-1409
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 66

Conread position: 1229-1410
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 105, 71

Conread position: 1229-1415
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 107, 0

Conread position: 1229-1416
Cow position:
Alignm length: 188
Alignm identity: 148
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 129, 0

Conread position: 1229-1416
Cow position:
Alignm length: 188
Alignm identity: 148
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 80, 0

Conread position: 1229-1416
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 33, 24

Conread position: 1230-1416
Cow position:
Alignm length: 187
Alignm identity: 147
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 64, 0

Conread position: 1230-1416
Cow position:
Alignm length: 189
Alignm identity: 145
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 117

Conread position: 1231-1405
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 132, 0

Conread position: 1231-1411
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 84, 112

Conread position: 1231-1412
Cow position:
Alignm length: 182
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 102, 0

Conread position: 1235-1400
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 1237-1416
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 5, 112

Conread position: 1239-1409
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 5, 101

Conread position: 1240-1402
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 1242-1416
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 123, 0

Conread position: 1243-1358
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 20

Conread position: 1245-1395
Cow position:
Alignm length: 151
Alignm identity: 124
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1246-1408
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 156, 0

Conread position: 1247-1416
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 62

Conread position: 1248-1412
Cow position:
Alignm length: 165
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 1248-1416
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 120, 0

Conread position: 1252-1413
Cow position:
Alignm length: 162
Alignm identity: 131
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 91, 0

Conread position: 1254-1416
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1254-1416
Cow position:
Alignm length: 165
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 80, 44

Conread position: 1262-1416
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 1263-1416
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 69

Conread position: 1264-1411
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 1264-1412
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 69, 95

Conread position: 1274-1416
Cow position:
Alignm length: 143
Alignm identity: 118
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1281-1416
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 1282-1411
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 1288-1416
Cow position:
Alignm length: 130
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 1297-1411
Cow position:
Alignm length: 115
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 1311-1416
Cow position:
Alignm length: 106
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 1328-1416
Cow position:
Alignm length: 89
Alignm identity: 77
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.