Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8036G13.5
        

               Conread position:
               1196-1369
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1198-1388
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1199-1390
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1199-1403
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               1199-1410
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               91, 113
               

               Conread position:
               1199-1410
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               1199-1415
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               129, 102
               

               Conread position:
               1199-1416
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 51
               

               Conread position:
               1200-1411
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               153, 82
               

               Conread position:
               1200-1416
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1201-1411
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               137, 109
               

               Conread position:
               1201-1416
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               19, 56
               

               Conread position:
               1201-1416
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               23, 32
               

               Conread position:
               1202-1384
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1202-1410
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               89, 103
               

               Conread position:
               1202-1412
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 111
               

               Conread position:
               1202-1416
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               23, 103
               

               Conread position:
               1203-1361
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               82, 115
               

               Conread position:
               1203-1381
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               1203-1415
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 0
               

               Conread position:
               1204-1412
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               95, 17
               

               Conread position:
               1205-1376
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1205-1415
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1206-1403
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               157
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               128, 15
               

               Conread position:
               1207-1349
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               127, 14
               

               Conread position:
               1207-1358
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               1207-1390
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1207-1411
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               126, 14
               

               Conread position:
               1208-1358
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1208-1388
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               7, 14
               

               Conread position:
               1208-1416
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1208-1416
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1209-1406
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1210-1358
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1210-1413
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1211-1380
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1212-1413
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1215-1379
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               1215-1397
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               121, 13
               

               Conread position:
               1215-1398
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               1215-1399
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               36, 41
               

               Conread position:
               1215-1409
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               157
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1215-1411
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               153, 35
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               161
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               103, 14
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               29, 6
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               151, 25
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               118, 13
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1221-1386
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               1221-1400
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1221-1414
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               113, 51
               

               Conread position:
               1221-1416
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1221-1416
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               160, 71
               

               Conread position:
               1222-1404
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1224-1365
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 73
               

               Conread position:
               1227-1415
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               107, 166
               

               Conread position:
               1228-1416
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1229-1413
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1229-1413
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               1229-1416
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               151
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               68, 11
               

               Conread position:
               1229-1416
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               121, 22
               

               Conread position:
               1231-1415
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               128, 85
               

               Conread position:
               1233-1384
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1236-1390
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1236-1410
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1240-1369
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1240-1408
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1240-1416
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               74, 54
               

               Conread position:
               1240-1416
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               164, 52
               

               Conread position:
               1242-1416
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               31, 120
               

               Conread position:
               1245-1380
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1250-1416
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               65, 11
               

               Conread position:
               1251-1416
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               1253-1403
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1256-1416
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1258-1416
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               1261-1398
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 57
               

               Conread position:
               1264-1411
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1270-1416
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1272-1416
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1273-1416
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1274-1416
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               1279-1416
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               1283-1413
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1293-1414
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1294-1392
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1298-1416
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 0
               
Show alignments to all cow chromosomes.