Cow genome map

Conread name: Ss1.1-Pig4-TMW8036G13.5

Conread position: 1196-1369
Cow position: chr19:11147436-11147604 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 1198-1388
Cow position: chr19:25594345-25594163 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 1199-1390
Cow position: chr19:38025879-38025689 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 27, 0

Conread position: 1199-1403
Cow position: chr19:10970902-10971114 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 82, 0

Conread position: 1199-1410
Cow position: chr19:10985288-10985074 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 113

Conread position: 1199-1410
Cow position: chr19:31380819-31381025 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 143, 0

Conread position: 1199-1415
Cow position: chr19:33290669-33290454 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 129, 102

Conread position: 1199-1416
Cow position: chr19:5648484-5648694 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 51

Conread position: 1200-1411
Cow position: chr19:14254546-14254752 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 153, 82

Conread position: 1200-1416
Cow position: chr19:31126985-31126768 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1201-1411
Cow position: chr19:9092626-9092834 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 137, 109

Conread position: 1201-1416
Cow position: chr19:15937020-15936808 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 19, 56

Conread position: 1201-1416
Cow position: chr19:24689466-24689256 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 32

Conread position: 1202-1384
Cow position: chr19:18704648-18704474 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 1202-1410
Cow position: chr19:31614293-31614088 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 89, 103

Conread position: 1202-1412
Cow position: chr19:40450205-40449993 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 111

Conread position: 1202-1416
Cow position: chr19:905151-904951 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 103

Conread position: 1203-1361
Cow position: chr19:38708337-38708176 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 82, 115

Conread position: 1203-1381
Cow position: chr19:46306153-46306332 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 19, 63

Conread position: 1203-1415
Cow position: chr19:38871252-38871039 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 1204-1412
Cow position: chr19:26003432-26003641 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 95, 17

Conread position: 1205-1376
Cow position: chr19:56008549-56008713 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 1205-1415
Cow position: chr19:28842178-28842388 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1206-1403
Cow position: chr19:9387814-9387619 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 157
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 128, 15

Conread position: 1207-1349
Cow position: chr19:30652913-30653055 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 127, 14

Conread position: 1207-1358
Cow position: chr19:36380401-36380253 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 14

Conread position: 1207-1390
Cow position: chr19:39222934-39223106 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 1207-1411
Cow position: chr19:40026755-40026954 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 126, 14

Conread position: 1208-1358
Cow position: chr19:41459374-41459224 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1208-1388
Cow position: chr19:54817355-54817536 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 7, 14

Conread position: 1208-1416
Cow position: chr19:2342655-2342454 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 1208-1416
Cow position: chr19:11876524-11876729 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 1209-1406
Cow position: chr19:22932372-22932568 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 12, 0

Conread position: 1210-1358
Cow position: chr19:35083971-35084113 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 1210-1413
Cow position: chr19:43727309-43727113 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 1211-1380
Cow position: chr19:12040794-12040624 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 123, 0

Conread position: 1212-1413
Cow position: chr19:25271245-25271441 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 157
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 9, 0

Conread position: 1215-1379
Cow position: chr19:11759057-11759222 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 119, 0

Conread position: 1215-1397
Cow position: chr19:47783592-47783776 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 121, 13

Conread position: 1215-1398
Cow position: chr19:46498099-46497926 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 146
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 6, 0

Conread position: 1215-1399
Cow position: chr19:41645540-41645350 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 36, 41

Conread position: 1215-1409
Cow position: chr19:2280475-2280662 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 157
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 1215-1411
Cow position: chr19:48479147-48478957 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 7, 41

Conread position: 1215-1416
Cow position: chr19:19246941-19246745 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 153, 35

Conread position: 1215-1416
Cow position: chr19:21284910-21285107 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 161
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 103, 14

Conread position: 1215-1416
Cow position: chr19:30935599-30935800 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 169
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 6

Conread position: 1215-1416
Cow position: chr19:31984478-31984678 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 151, 25

Conread position: 1215-1416
Cow position: chr19:32214969-32214772 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 22, 78

Conread position: 1215-1416
Cow position: chr19:35345099-35344897 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 118, 13

Conread position: 1215-1416
Cow position: chr19:36976740-36976940 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 182, 0

Conread position: 1215-1416
Cow position: chr19:39250428-39250238 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 1221-1386
Cow position: chr19:1153372-1153206 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 1221-1400
Cow position: chr19:20291927-20292105 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 1221-1414
Cow position: chr19:38907196-38907383 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 113, 51

Conread position: 1221-1416
Cow position: chr19:952854-952665 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 73, 0

Conread position: 1221-1416
Cow position: chr19:24721841-24721649 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 160, 71

Conread position: 1222-1404
Cow position: chr19:2770853-2771029 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 1224-1365
Cow position: chr19:47433407-47433549 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 73

Conread position: 1227-1415
Cow position: chr19:4824822-4825010 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 107, 166

Conread position: 1228-1416
Cow position: chr19:7030076-7029890 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 44, 0

Conread position: 1229-1413
Cow position: chr19:11636788-11636964 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 1229-1413
Cow position: chr19:55236643-55236465 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 135, 0

Conread position: 1229-1416
Cow position: chr19:36461371-36461558 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 151
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 68, 11

Conread position: 1229-1416
Cow position: chr19:54225154-54225335 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 121, 22

Conread position: 1231-1415
Cow position: chr19:1712985-1713169 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 128, 85

Conread position: 1233-1384
Cow position: chr19:42896618-42896462 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 1236-1390
Cow position: chr19:5986386-5986231 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 130
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 97, 0

Conread position: 1236-1410
Cow position: chr19:7838898-7839064 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 1240-1369
Cow position: chr19:24328773-24328644 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1240-1408
Cow position: chr19:31827236-31827078 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1240-1416
Cow position: chr19:50658285-50658111 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 74, 54

Conread position: 1240-1416
Cow position: chr19:53738480-53738308 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 164, 52

Conread position: 1242-1416
Cow position: chr19:22863523-22863694 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 120

Conread position: 1245-1380
Cow position: chr19:42416317-42416446 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 1250-1416
Cow position: chr19:19662178-19662018 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 65, 11

Conread position: 1251-1416
Cow position: chr19:6735090-6735257 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 138
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 99, 0

Conread position: 1253-1403
Cow position: chr19:3123923-3124064 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 1256-1416
Cow position: chr19:35064060-35064223 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 133
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 50, 0

Conread position: 1258-1416
Cow position: chr19:36318434-36318280 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 107, 0

Conread position: 1261-1398
Cow position: chr19:47771755-47771620 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 57

Conread position: 1264-1411
Cow position: chr19:2821705-2821560 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 1270-1416
Cow position: chr19:21091211-21091069 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 1272-1416
Cow position: chr19:3080577-3080432 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 1273-1416
Cow position: chr19:51800462-51800601 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 1274-1416
Cow position: chr19:9100260-9100117 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 80, 0

Conread position: 1279-1416
Cow position: chr19:7123969-7123836 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 1283-1413
Cow position: chr19:25711222-25711346 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 1293-1414
Cow position: chr19:10207703-10207583 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 1294-1392
Cow position: chr19:33672634-33672732 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1298-1416
Cow position: chr19:16110098-16110217 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 0

Show alignments to all cow chromosomes.