Cow genome map

Conread name: Ss1.1-Pig4-TMW8036G13.5

Conread position: 1182-1380
Cow position: chr20:8444888-8445088 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 37, 14

Conread position: 1190-1395
Cow position: chr20:32587604-32587408 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 1190-1416
Cow position: chr20:10759222-10759448 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 52, 73

Conread position: 1197-1394
Cow position: chr20:2487387-2487191 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 24

Conread position: 1198-1413
Cow position: chr20:20359541-20359755 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 140, 54

Conread position: 1199-1377
Cow position: chr20:13617473-13617289 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 117

Conread position: 1199-1400
Cow position: chr20:32972786-32972591 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 1199-1400
Cow position: chr20:33962976-33962783 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 161, 0

Conread position: 1199-1409
Cow position: chr20:23235275-23235067 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 27, 169

Conread position: 1199-1416
Cow position: chr20:32861765-32861971 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 1200-1410
Cow position: chr20:11355426-11355222 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 1200-1410
Cow position: chr20:14471327-14471541 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 57, 21

Conread position: 1201-1406
Cow position: chr20:34108349-34108139 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 114

Conread position: 1201-1413
Cow position: chr20:24643910-24644117 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 120, 111

Conread position: 1201-1416
Cow position: chr20:13465746-13465536 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 82

Conread position: 1201-1416
Cow position: chr20:19266386-19266182 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 90, 0

Conread position: 1201-1416
Cow position: chr20:24234383-24234183 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 40

Conread position: 1202-1330
Cow position: chr20:1478778-1478652 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 1202-1365
Cow position: chr20:7873748-7873909 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 1202-1416
Cow position: chr20:2456263-2456057 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 1203-1369
Cow position: chr20:3105251-3105087 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 1203-1388
Cow position: chr20:39669179-39668998 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 1204-1347
Cow position: chr20:2801632-2801773 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 1204-1416
Cow position: chr20:23163671-23163876 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 88, 18

Conread position: 1205-1352
Cow position: chr20:8556610-8556758 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 1205-1410
Cow position: chr20:26880668-26880877 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 154, 16

Conread position: 1205-1413
Cow position: chr20:4157650-4157449 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 73, 16

Conread position: 1205-1416
Cow position: chr20:13608835-13609040 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 46, 0

Conread position: 1206-1415
Cow position: chr20:15241530-15241739 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 76, 22

Conread position: 1207-1381
Cow position: chr20:6104918-6105094 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 8, 0

Conread position: 1207-1415
Cow position: chr20:25823509-25823304 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 1208-1410
Cow position: chr20:7101018-7100812 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 110, 0

Conread position: 1208-1412
Cow position: chr20:25686115-25686319 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 125, 189

Conread position: 1209-1365
Cow position: chr20:37136316-37136161 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 124, 12

Conread position: 1209-1394
Cow position: chr20:21518873-21518696 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 12, 0

Conread position: 1209-1401
Cow position: chr20:15073600-15073796 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 21, 34

Conread position: 1209-1415
Cow position: chr20:10837984-10838186 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 125, 65

Conread position: 1209-1416
Cow position: chr20:1205706-1205906 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 129, 66

Conread position: 1210-1410
Cow position: chr20:21236877-21236687 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 1210-1415
Cow position: chr20:25147008-25146808 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 40, 0

Conread position: 1211-1403
Cow position: chr20:2430767-2430581 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 123, 11

Conread position: 1212-1403
Cow position: chr20:8262143-8261953 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 157
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 11, 40

Conread position: 1213-1412
Cow position: chr20:6903540-6903342 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 157
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 121, 48

Conread position: 1213-1412
Cow position: chr20:35924562-35924752 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 1213-1413
Cow position: chr20:13494732-13494542 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 13

Conread position: 1214-1350
Cow position: chr20:29741184-29741318 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1215-1382
Cow position: chr20:41534683-41534519 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 147, 67

Conread position: 1215-1402
Cow position: chr20:26749989-26750170 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 1215-1412
Cow position: chr20:17363433-17363627 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 100, 92

Conread position: 1215-1416
Cow position: chr20:4933846-4934044 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 6, 0

Conread position: 1215-1416
Cow position: chr20:9706694-9706895 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 119, 13

Conread position: 1215-1416
Cow position: chr20:14679841-14679647 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 0

Conread position: 1215-1416
Cow position: chr20:39220499-39220691 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 1216-1414
Cow position: chr20:17670403-17670210 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 21, 35

Conread position: 1216-1415
Cow position: chr20:5763070-5763268 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 46, 0

Conread position: 1221-1412
Cow position: chr20:37029041-37028848 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 30, 43

Conread position: 1221-1416
Cow position: chr20:7386770-7386584 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 1221-1416
Cow position: chr20:38858216-38858395 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1225-1414
Cow position: chr20:16979964-16979775 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 1227-1411
Cow position: chr20:33178313-33178487 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 1227-1416
Cow position: chr20:220822-220639 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 115, 0

Conread position: 1228-1411
Cow position: chr20:4204498-4204321 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 87, 72

Conread position: 1228-1412
Cow position: chr20:42255071-42254890 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1228-1416
Cow position: chr20:17397052-17397235 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 1228-1416
Cow position: chr20:30855547-30855729 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 46, 58

Conread position: 1229-1416
Cow position: chr20:18530646-18530460 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 105, 34

Conread position: 1231-1416
Cow position: chr20:39656452-39656277 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 1240-1416
Cow position: chr20:19865448-19865277 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 132, 0

Conread position: 1240-1416
Cow position: chr20:32668169-32667997 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 162, 11

Conread position: 1242-1397
Cow position: chr20:23604536-23604687 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 127
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 125, 0

Conread position: 1242-1412
Cow position: chr20:16492272-16492100 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 1244-1414
Cow position: chr20:25274096-25274260 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 139
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 100, 0

Conread position: 1247-1392
Cow position: chr20:35683212-35683353 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 118, 0

Conread position: 1251-1410
Cow position: chr20:27001575-27001423 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 1254-1412
Cow position: chr20:30648014-30648173 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 1262-1413
Cow position: chr20:40355300-40355159 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1274-1415
Cow position: chr20:614894-614753 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1278-1405
Cow position: chr20:37450712-37450585 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1285-1416
Cow position: chr20:34178322-34178448 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 1292-1416
Cow position: chr20:26077231-26077107 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 47, 110

Conread position: 1296-1415
Cow position: chr20:40564295-40564175 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 1303-1416
Cow position: chr20:20471921-20471809 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 1306-1416
Cow position: chr20:5576910-5576800 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1306-1416
Cow position: chr20:14920718-14920608 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 31, 12

Conread position: 1314-1416
Cow position: chr20:38124014-38123912 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.