Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8036G13.5
        

               Conread position:
               1181-1416
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               69, 15
               

               Conread position:
               1193-1416
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               190, 6
               

               Conread position:
               1197-1396
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1197-1410
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               169
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1197-1412
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               95, 23
               

               Conread position:
               1198-1341
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1198-1380
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               135, 47
               

               Conread position:
               1198-1402
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               158
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               1198-1411
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1198-1412
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               136, 46
               

               Conread position:
               1199-1397
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               85, 159
               

               Conread position:
               1199-1409
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               1199-1416
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               25, 53
               

               Conread position:
               1200-1410
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               20, 168
               

               Conread position:
               1200-1411
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               137, 26
               

               Conread position:
               1200-1411
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               23, 74
               

               Conread position:
               1200-1416
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               1201-1388
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1201-1395
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               134, 27
               

               Conread position:
               1201-1403
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1201-1412
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               81, 116
               

               Conread position:
               1201-1416
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               1202-1367
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1202-1411
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               105, 19
               

               Conread position:
               1202-1412
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               21, 118
               

               Conread position:
               1202-1416
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 51
               

               Conread position:
               1203-1416
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               145, 37
               

               Conread position:
               1203-1416
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               1203-1416
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               1203-1416
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               194, 73
               

               Conread position:
               1204-1408
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1204-1416
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               129, 148
               

               Conread position:
               1205-1369
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               145, 23
               

               Conread position:
               1205-1413
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               12, 49
               

               Conread position:
               1205-1413
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               177, 16
               

               Conread position:
               1205-1416
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1206-1411
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1206-1412
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               103, 22
               

               Conread position:
               1206-1416
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1207-1412
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               126, 16
               

               Conread position:
               1208-1416
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               60, 13
               

               Conread position:
               1208-1416
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1208-1416
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               165
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1209-1377
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               129, 42
               

               Conread position:
               1209-1411
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               115, 12
               

               Conread position:
               1210-1396
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               130, 112
               

               Conread position:
               1210-1398
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1210-1410
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1210-1415
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               124, 43
               

               Conread position:
               1210-1416
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               99, 73
               

               Conread position:
               1211-1407
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               123, 27
               

               Conread position:
               1212-1414
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               11, 40
               

               Conread position:
               1212-1416
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               123, 30
               

               Conread position:
               1213-1413
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               159
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               1214-1386
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1214-1396
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               39, 23
               

               Conread position:
               1214-1416
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               120, 101
               

               Conread position:
               1215-1371
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               1215-1388
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               118, 6
               

               Conread position:
               1215-1396
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               119, 104
               

               Conread position:
               1215-1398
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               8, 80
               

               Conread position:
               1215-1411
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1215-1412
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               119, 27
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               124, 67
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               159
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               119, 104
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               161
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1216-1387
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1216-1391
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               117, 64
               

               Conread position:
               1216-1400
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               119, 76
               

               Conread position:
               1221-1387
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1221-1412
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               1221-1413
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1221-1413
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               172, 90
               

               Conread position:
               1221-1416
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1221-1416
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1221-1416
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1227-1375
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1227-1401
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               106, 102
               

               Conread position:
               1227-1416
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               30, 130
               

               Conread position:
               1229-1416
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1237-1359
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1240-1402
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               1242-1410
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1243-1413
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               9, 54
               

               Conread position:
               1243-1416
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               91, 30
               

               Conread position:
               1261-1385
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1262-1385
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1262-1404
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               139, 63
               

               Conread position:
               1266-1409
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               40, 104
               

               Conread position:
               1267-1399
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1274-1392
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               1279-1411
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1307-1405
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               29, 0
               
Show alignments to all cow chromosomes.