Cow genome map

Conread name: Ss1.1-Pig4-TMW8036G13.5

Conread position: 1184-1413
Cow position:
Alignm length: 230
Alignm identity: 172
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 37, 0

Conread position: 1187-1416
Cow position:
Alignm length: 230
Alignm identity: 175
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 1192-1337
Cow position:
Alignm length: 146
Alignm identity: 107
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 1194-1381
Cow position:
Alignm length: 188
Alignm identity: 149
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 21, 0

Conread position: 1195-1416
Cow position:
Alignm length: 223
Alignm identity: 171
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 102, 56

Conread position: 1195-1416
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 170, 0

Conread position: 1196-1381
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 149

Conread position: 1196-1408
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 1197-1369
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 21, 0

Conread position: 1198-1333
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 115

Conread position: 1198-1374
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1198-1389
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 1198-1399
Cow position:
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 1198-1416
Cow position:
Alignm length: 221
Alignm identity: 164
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 19, 41

Conread position: 1199-1384
Cow position:
Alignm length: 187
Alignm identity: 147
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 173

Conread position: 1199-1415
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 31, 165

Conread position: 1199-1416
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 93, 0

Conread position: 1200-1416
Cow position:
Alignm length: 220
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 89, 50

Conread position: 1200-1416
Cow position:
Alignm length: 217
Alignm identity: 167
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 51, 0

Conread position: 1201-1382
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 106, 20

Conread position: 1201-1402
Cow position:
Alignm length: 206
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 20

Conread position: 1201-1414
Cow position:
Alignm length: 220
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 27

Conread position: 1202-1346
Cow position:
Alignm length: 148
Alignm identity: 119
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 17

Conread position: 1202-1402
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 1202-1411
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 18, 97

Conread position: 1202-1412
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 81, 118

Conread position: 1202-1412
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 105, 38

Conread position: 1202-1416
Cow position:
Alignm length: 217
Alignm identity: 163
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 113, 19

Conread position: 1202-1416
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 1203-1394
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 130, 18

Conread position: 1203-1410
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 1203-1416
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 18, 0

Conread position: 1204-1410
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 103, 49

Conread position: 1205-1355
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 1205-1400
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 36

Conread position: 1205-1412
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 82, 16

Conread position: 1205-1412
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 129, 15

Conread position: 1205-1416
Cow position:
Alignm length: 214
Alignm identity: 171
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 10, 69

Conread position: 1205-1416
Cow position:
Alignm length: 220
Alignm identity: 170
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 138, 17

Conread position: 1206-1379
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 126, 15

Conread position: 1206-1386
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 78, 15

Conread position: 1206-1402
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 178, 15

Conread position: 1206-1412
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 1206-1412
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 76, 107

Conread position: 1206-1415
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 55, 16

Conread position: 1206-1416
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 1207-1358
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 1207-1382
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 127, 149

Conread position: 1207-1403
Cow position:
Alignm length: 203
Alignm identity: 155
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 12, 164

Conread position: 1208-1416
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 106, 13

Conread position: 1209-1412
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 125, 0

Conread position: 1209-1412
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 125, 20

Conread position: 1210-1408
Cow position:
Alignm length: 199
Alignm identity: 153
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 11, 0

Conread position: 1210-1409
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 61

Conread position: 1210-1412
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 97, 101

Conread position: 1210-1416
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 102, 11

Conread position: 1210-1416
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 82, 0

Conread position: 1211-1381
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 1211-1398
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 122, 71

Conread position: 1211-1413
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 10

Conread position: 1213-1402
Cow position:
Alignm length: 190
Alignm identity: 150
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 8, 0

Conread position: 1213-1415
Cow position:
Alignm length: 204
Alignm identity: 160
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 92, 8

Conread position: 1213-1416
Cow position:
Alignm length: 204
Alignm identity: 163
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 38, 0

Conread position: 1214-1373
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 112, 0

Conread position: 1214-1416
Cow position:
Alignm length: 203
Alignm identity: 164
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 0

Conread position: 1215-1360
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1215-1377
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 1215-1384
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 1215-1388
Cow position:
Alignm length: 176
Alignm identity: 137
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 6

Conread position: 1215-1399
Cow position:
Alignm length: 185
Alignm identity: 152
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 67, 0

Conread position: 1215-1403
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 1215-1408
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 119, 0

Conread position: 1215-1409
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 8, 37

Conread position: 1215-1410
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 125, 68

Conread position: 1215-1412
Cow position:
Alignm length: 208
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 18

Conread position: 1215-1414
Cow position:
Alignm length: 201
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 1215-1416
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 108, 6

Conread position: 1215-1416
Cow position:
Alignm length: 202
Alignm identity: 153
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 100, 0

Conread position: 1216-1409
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 173

Conread position: 1221-1391
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 104, 79

Conread position: 1221-1416
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 112, 82

Conread position: 1221-1416
Cow position:
Alignm length: 196
Alignm identity: 151
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 61, 0

Conread position: 1222-1369
Cow position:
Alignm length: 148
Alignm identity: 109
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1222-1377
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 1223-1403
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 85, 28

Conread position: 1223-1416
Cow position:
Alignm length: 194
Alignm identity: 147
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 1225-1356
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 1225-1402
Cow position:
Alignm length: 178
Alignm identity: 144
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 26, 0

Conread position: 1227-1377
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 43, 66

Conread position: 1227-1416
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 150, 34

Conread position: 1229-1413
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 27

Conread position: 1230-1373
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 1230-1412
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 104, 41

Conread position: 1231-1416
Cow position:
Alignm length: 186
Alignm identity: 147
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 51, 0

Conread position: 1233-1408
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 101, 59

Conread position: 1235-1369
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1236-1415
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 30, 0

Conread position: 1239-1416
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 1241-1416
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 92, 122

Conread position: 1242-1406
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 1242-1412
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 59

Conread position: 1244-1394
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1244-1416
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 1245-1416
Cow position:
Alignm length: 176
Alignm identity: 137
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 98, 0

Conread position: 1247-1395
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 1248-1413
Cow position:
Alignm length: 166
Alignm identity: 136
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 1252-1414
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 113, 0

Conread position: 1255-1416
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 49

Conread position: 1255-1416
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 86

Conread position: 1259-1387
Cow position:
Alignm length: 129
Alignm identity: 107
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 1262-1411
Cow position:
Alignm length: 151
Alignm identity: 118
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 109, 0

Conread position: 1263-1416
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 118

Conread position: 1264-1416
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 1264-1416
Cow position:
Alignm length: 154
Alignm identity: 126
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 26, 75

Conread position: 1271-1416
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 32

Conread position: 1285-1416
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 1298-1401
Cow position:
Alignm length: 104
Alignm identity: 87
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1303-1416
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 1306-1415
Cow position:
Alignm length: 110
Alignm identity: 92
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1311-1416
Cow position:
Alignm length: 107
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 1323-1416
Cow position:
Alignm length: 94
Alignm identity: 80
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 0

Show alignments to all cow chromosomes.