Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8036G13.5
        

               Conread position:
               89-1416
               

               Cow position:
               
               

               Alignm length:
               1328
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               1276, 0
               

               Conread position:
               1167-1379
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               1189-1416
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               1190-1416
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               146, 38
               

               Conread position:
               1193-1318
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               22, 57
               

               Conread position:
               1195-1376
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1197-1412
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               25, 59
               

               Conread position:
               1198-1375
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1198-1416
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               18, 52
               

               Conread position:
               1199-1366
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1199-1392
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               1199-1399
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               93, 151
               

               Conread position:
               1199-1409
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1199-1411
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               1199-1415
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               108, 19
               

               Conread position:
               1199-1416
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1199-1416
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               45, 54
               

               Conread position:
               1200-1407
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1201-1416
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               175, 20
               

               Conread position:
               1201-1416
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1202-1412
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               20, 137
               

               Conread position:
               1202-1416
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1203-1346
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1203-1410
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1204-1416
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               19, 183
               

               Conread position:
               1205-1369
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               85, 49
               

               Conread position:
               1205-1412
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               87, 23
               

               Conread position:
               1207-1412
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               1207-1416
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               1208-1416
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1209-1416
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               131, 41
               

               Conread position:
               1210-1403
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               154
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1211-1411
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               96, 41
               

               Conread position:
               1211-1416
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               1212-1412
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               104, 41
               

               Conread position:
               1215-1369
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1215-1412
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 86
               

               Conread position:
               1215-1413
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               158
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               138, 36
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               119, 33
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               159
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               1216-1412
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               118, 88
               

               Conread position:
               1221-1369
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1221-1384
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1221-1411
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               115, 61
               

               Conread position:
               1221-1412
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               1221-1416
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               113, 64
               

               Conread position:
               1222-1396
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1222-1406
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               143, 94
               

               Conread position:
               1223-1399
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               111, 29
               

               Conread position:
               1224-1416
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               1228-1401
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1228-1404
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               1229-1416
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1230-1382
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               145, 82
               

               Conread position:
               1232-1406
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1234-1416
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               145, 36
               

               Conread position:
               1240-1416
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1248-1402
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               1251-1394
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               34, 64
               

               Conread position:
               1254-1413
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1259-1416
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1262-1416
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1270-1416
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1273-1416
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1289-1400
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1295-1416
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1296-1402
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1311-1416
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               27, 0
               
Show alignments to all cow chromosomes.