Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8036G13.5 |
| Conread position: | 1172-1416 |
| Cow position: | chr26:10523214-10523448 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1192-1413 |
| Cow position: | chr26:9064555-9064345 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 36 |
| Conread position: | 1194-1307 |
| Cow position: | chr26:7102542-7102657 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1196-1369 |
| Cow position: | chr26:16851351-16851182 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 42, 35 |
| Conread position: | 1198-1374 |
| Cow position: | chr26:2246215-2246041 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 37, 144 |
| Conread position: | 1198-1384 |
| Cow position: | chr26:21577884-21578070 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1199-1350 |
| Cow position: | chr26:13843415-13843562 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 23 |
| Conread position: | 1199-1411 |
| Cow position: | chr26:28789911-28790116 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 1199-1412 |
| Cow position: | chr26:6475224-6475425 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 108, 51 |
| Conread position: | 1200-1352 |
| Cow position: | chr26:25241840-25241689 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1200-1402 |
| Cow position: | chr26:32215659-32215457 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 132, 29 |
| Conread position: | 1200-1411 |
| Cow position: | chr26:12652033-12652241 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 92, 17 |
| Conread position: | 1200-1416 |
| Cow position: | chr26:31466889-31466681 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1202-1416 |
| Cow position: | chr26:782720-782932 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 1204-1416 |
| Cow position: | chr26:14924693-14924484 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 15, 96 |
| Conread position: | 1205-1416 |
| Cow position: | chr26:7956058-7955851 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 1205-1416 |
| Cow position: | chr26:16112979-16113191 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 26 |
| Conread position: | 1206-1408 |
| Cow position: | chr26:9666209-9666400 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1206-1410 |
| Cow position: | chr26:9101905-9102105 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 128, 15 |
| Conread position: | 1206-1412 |
| Cow position: | chr26:10137533-10137738 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 162 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 9, 97 |
| Conread position: | 1207-1389 |
| Cow position: | chr26:19332800-19332978 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1208-1411 |
| Cow position: | chr26:12217050-12216860 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1210-1376 |
| Cow position: | chr26:10292982-10292814 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 23, 86 |
| Conread position: | 1210-1405 |
| Cow position: | chr26:12579810-12580001 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 33, 12 |
| Conread position: | 1211-1372 |
| Cow position: | chr26:12569638-12569793 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 148, 10 |
| Conread position: | 1214-1410 |
| Cow position: | chr26:32865690-32865888 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 151 |
| Conread position: | 1214-1416 |
| Cow position: | chr26:27585972-27585775 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 1215-1353 |
| Cow position: | chr26:19649184-19649051 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 118, 35 |
| Conread position: | 1215-1391 |
| Cow position: | chr26:10292792-10292621 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 123, 6 |
| Conread position: | 1215-1397 |
| Cow position: | chr26:3186747-3186564 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 1215-1413 |
| Cow position: | chr26:12520227-12520029 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1215-1416 |
| Cow position: | chr26:2196393-2196593 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 36, 6 |
| Conread position: | 1215-1416 |
| Cow position: | chr26:2769644-2769839 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 6 |
| Conread position: | 1215-1416 |
| Cow position: | chr26:6470076-6470275 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 96, 85 |
| Conread position: | 1216-1408 |
| Cow position: | chr26:24182855-24183036 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1216-1415 |
| Cow position: | chr26:17203945-17204145 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 27, 78 |
| Conread position: | 1221-1369 |
| Cow position: | chr26:6299612-6299469 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 1221-1414 |
| Cow position: | chr26:18719447-18719258 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 156 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 1221-1416 |
| Cow position: | chr26:14080896-14080705 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 159 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1221-1416 |
| Cow position: | chr26:16604485-16604285 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1221-1416 |
| Cow position: | chr26:19111105-19110912 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 158 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 156, 61 |
| Conread position: | 1222-1416 |
| Cow position: | chr26:12669390-12669198 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 1227-1415 |
| Cow position: | chr26:21860008-21859823 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 107, 53 |
| Conread position: | 1228-1413 |
| Cow position: | chr26:3756403-3756228 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1230-1416 |
| Cow position: | chr26:8651426-8651605 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1231-1416 |
| Cow position: | chr26:11567790-11567970 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1237-1407 |
| Cow position: | chr26:19768628-19768799 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 1239-1416 |
| Cow position: | chr26:19903555-19903380 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 148 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 1241-1416 |
| Cow position: | chr26:7162238-7162413 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 92, 59 |
| Conread position: | 1243-1416 |
| Cow position: | chr26:17289366-17289206 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1245-1413 |
| Cow position: | chr26:19935192-19935355 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 1245-1416 |
| Cow position: | chr26:3019248-3019416 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 1248-1405 |
| Cow position: | chr26:7387933-7387776 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 132 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1252-1412 |
| Cow position: | chr26:17155167-17155319 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1261-1416 |
| Cow position: | chr26:34118881-34119037 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1264-1365 |
| Cow position: | chr26:30385925-30385825 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1264-1414 |
| Cow position: | chr26:30605216-30605357 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1266-1416 |
| Cow position: | chr26:29353360-29353509 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 78 |
| Conread position: | 1266-1416 |
| Cow position: | chr26:34169038-34169186 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 1289-1408 |
| Cow position: | chr26:5783545-5783426 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.