Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8036G13.5
        

               Conread position:
               1187-1383
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               146, 34
               

               Conread position:
               1198-1405
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               126, 163
               

               Conread position:
               1198-1416
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               1198-1416
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               136, 28
               

               Conread position:
               1198-1416
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               1199-1402
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 22
               

               Conread position:
               1199-1411
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1199-1416
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               21, 105
               

               Conread position:
               1200-1412
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               133, 163
               

               Conread position:
               1200-1416
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               19, 111
               

               Conread position:
               1201-1413
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1201-1416
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1203-1372
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1203-1414
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               56, 145
               

               Conread position:
               1203-1416
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1204-1373
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               13, 71
               

               Conread position:
               1204-1414
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1204-1416
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               1205-1409
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               128, 17
               

               Conread position:
               1205-1416
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               19, 47
               

               Conread position:
               1206-1339
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1206-1416
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1207-1414
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1207-1416
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               16, 46
               

               Conread position:
               1207-1416
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1207-1416
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               180, 14
               

               Conread position:
               1208-1401
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               124, 40
               

               Conread position:
               1208-1412
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1208-1416
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1209-1370
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               1209-1413
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               163
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               111, 12
               

               Conread position:
               1209-1416
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               48, 54
               

               Conread position:
               1210-1382
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               43, 11
               

               Conread position:
               1210-1416
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               12, 44
               

               Conread position:
               1212-1403
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               186, 99
               

               Conread position:
               1214-1409
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               124, 7
               

               Conread position:
               1214-1415
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               108, 14
               

               Conread position:
               1214-1415
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               133, 39
               

               Conread position:
               1215-1390
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               1215-1407
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               133, 6
               

               Conread position:
               1215-1412
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1215-1413
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               1215-1415
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               80, 7
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1216-1412
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1218-1412
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 13
               

               Conread position:
               1221-1416
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1222-1412
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               110, 123
               

               Conread position:
               1222-1413
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               70, 30
               

               Conread position:
               1223-1414
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               12, 19
               

               Conread position:
               1224-1407
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               1227-1405
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               36, 71
               

               Conread position:
               1228-1412
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               79, 52
               

               Conread position:
               1228-1416
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               1229-1412
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               53, 84
               

               Conread position:
               1229-1416
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1230-1412
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               104, 20
               

               Conread position:
               1233-1413
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1236-1416
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1242-1407
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               65, 70
               

               Conread position:
               1243-1416
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1246-1381
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               1250-1402
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               1256-1391
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 26
               

               Conread position:
               1257-1411
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               52, 23
               

               Conread position:
               1261-1412
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1265-1416
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1273-1409
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               1276-1415
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1298-1416
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               1304-1416
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               32, 0
               
Show alignments to all cow chromosomes.