Cow genome map

Conread name: Ss1.1-Pig4-TMW8036G13.5

Conread position: 1190-1391
Cow position: chr29:21012140-21012338 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 143, 58

Conread position: 1194-1410
Cow position: chr29:26129694-26129484 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 1197-1358
Cow position: chr29:42686520-42686681 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 72, 24

Conread position: 1197-1413
Cow position: chr29:11787983-11787782 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 1198-1369
Cow position: chr29:7637361-7637532 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 59

Conread position: 1199-1360
Cow position: chr29:21534251-21534410 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 1200-1366
Cow position: chr29:32080741-32080576 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 1200-1404
Cow position: chr29:19607327-19607532 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 17, 198

Conread position: 1200-1412
Cow position: chr29:39023142-39023358 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 134, 0

Conread position: 1201-1354
Cow position: chr29:6149918-6150075 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 1201-1410
Cow position: chr29:12625785-12625991 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 114, 20

Conread position: 1201-1414
Cow position: chr29:18541241-18541042 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 143, 0

Conread position: 1201-1415
Cow position: chr29:35442268-35442482 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 136, 20

Conread position: 1201-1415
Cow position: chr29:44550700-44550477 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 137, 214

Conread position: 1201-1416
Cow position: chr29:7663077-7663289 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 18, 48

Conread position: 1202-1358
Cow position: chr29:19683-19528 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 1202-1411
Cow position: chr29:7407710-7407915 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 17, 91

Conread position: 1202-1416
Cow position: chr29:4444910-4444697 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 132, 21

Conread position: 1203-1388
Cow position: chr29:11071494-11071680 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 165, 48

Conread position: 1203-1416
Cow position: chr29:29302466-29302679 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 101, 19

Conread position: 1204-1374
Cow position: chr29:3050360-3050192 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 130, 141

Conread position: 1204-1411
Cow position: chr29:8862288-8862495 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 154

Conread position: 1204-1416
Cow position: chr29:21265952-21265742 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 130, 77

Conread position: 1205-1410
Cow position: chr29:11366424-11366224 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 1205-1410
Cow position: chr29:30350742-30350946 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 102, 16

Conread position: 1205-1412
Cow position: chr29:356509-356304 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 128, 26

Conread position: 1205-1412
Cow position: chr29:31651612-31651394 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 1205-1415
Cow position: chr29:13634110-13634318 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 167, 87

Conread position: 1206-1412
Cow position: chr29:13126938-13127139 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 128, 21

Conread position: 1206-1416
Cow position: chr29:4367912-4367705 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 128, 22

Conread position: 1207-1345
Cow position: chr29:34994029-34993893 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 1207-1406
Cow position: chr29:11766903-11766711 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 44, 0

Conread position: 1208-1375
Cow position: chr29:9662204-9662036 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 1208-1411
Cow position: chr29:708943-709149 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 67, 0

Conread position: 1208-1412
Cow position: chr29:38581170-38580963 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 44, 38

Conread position: 1208-1416
Cow position: chr29:19907543-19907337 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 47

Conread position: 1210-1387
Cow position: chr29:21174522-21174696 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 126, 11

Conread position: 1210-1390
Cow position: chr29:18021496-18021678 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 102

Conread position: 1210-1391
Cow position: chr29:6208245-6208069 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 123, 11

Conread position: 1210-1403
Cow position: chr29:16279182-16278980 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 71, 164

Conread position: 1210-1411
Cow position: chr29:6772318-6772118 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 6, 85

Conread position: 1210-1415
Cow position: chr29:5616683-5616888 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 129, 11

Conread position: 1210-1416
Cow position: chr29:1340968-1340764 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 1210-1416
Cow position: chr29:21186689-21186892 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 123, 11

Conread position: 1213-1367
Cow position: chr29:8794535-8794379 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 8

Conread position: 1213-1369
Cow position: chr29:7129368-7129521 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 1213-1411
Cow position: chr29:18073121-18072929 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 39

Conread position: 1213-1416
Cow position: chr29:5976610-5976803 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 8, 0

Conread position: 1213-1416
Cow position: chr29:26299152-26298954 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 82, 68

Conread position: 1214-1416
Cow position: chr29:11005912-11005714 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 123, 30

Conread position: 1215-1401
Cow position: chr29:27688562-27688744 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 119, 31

Conread position: 1215-1404
Cow position: chr29:942801-942622 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1215-1411
Cow position: chr29:2274664-2274855 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 1215-1416
Cow position: chr29:18963915-18963714 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 1215-1416
Cow position: chr29:29559541-29559740 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 125, 57

Conread position: 1215-1416
Cow position: chr29:34699665-34699852 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 1216-1412
Cow position: chr29:26318032-26317835 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 47

Conread position: 1221-1376
Cow position: chr29:942998-942839 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 1221-1376
Cow position: chr29:32520422-32520266 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 147, 101

Conread position: 1221-1387
Cow position: chr29:23742091-23742254 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 161, 51

Conread position: 1221-1411
Cow position: chr29:10153618-10153811 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 59, 148

Conread position: 1221-1416
Cow position: chr29:24603959-24604157 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 43, 15

Conread position: 1222-1406
Cow position: chr29:9512429-9512249 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 112, 28

Conread position: 1222-1412
Cow position: chr29:19734835-19734654 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 143, 0

Conread position: 1223-1415
Cow position: chr29:12451535-12451360 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 1224-1416
Cow position: chr29:37960807-37960995 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 110, 5

Conread position: 1225-1352
Cow position: chr29:32219110-32218985 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 1227-1402
Cow position: chr29:21675559-21675389 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 33, 0

Conread position: 1227-1412
Cow position: chr29:4423262-4423456 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 1227-1416
Cow position: chr29:7054579-7054399 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 1227-1416
Cow position: chr29:22895896-22895706 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 108, 0

Conread position: 1228-1412
Cow position: chr29:40337374-40337554 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 106, 93

Conread position: 1231-1416
Cow position: chr29:26985392-26985206 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 103, 0

Conread position: 1235-1413
Cow position: chr29:16054975-16055145 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 16, 0

Conread position: 1242-1416
Cow position: chr29:14758709-14758879 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 123, 0

Conread position: 1244-1411
Cow position: chr29:25426507-25426670 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 72, 0

Conread position: 1251-1413
Cow position: chr29:13554282-13554123 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 65, 115

Conread position: 1251-1414
Cow position: chr29:19509089-19508935 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 1253-1416
Cow position: chr29:41083291-41083128 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1254-1416
Cow position: chr29:18695392-18695232 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1261-1413
Cow position: chr29:18068039-18067890 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1263-1416
Cow position: chr29:25923829-25923981 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 1274-1416
Cow position: chr29:650396-650261 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 1275-1394
Cow position: chr29:36435551-36435432 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 40, 34

Conread position: 1286-1416
Cow position: chr29:19897719-19897590 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 1294-1409
Cow position: chr29:17543542-17543431 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 1298-1413
Cow position: chr29:32645009-32644894 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.