Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8036G13.5
        

               Conread position:
               1190-1391
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               143, 58
               

               Conread position:
               1194-1410
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1197-1358
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               72, 24
               

               Conread position:
               1197-1413
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1198-1369
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 59
               

               Conread position:
               1199-1360
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1200-1366
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1200-1404
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               160
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               17, 198
               

               Conread position:
               1200-1412
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               1201-1354
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1201-1410
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               114, 20
               

               Conread position:
               1201-1414
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               1201-1415
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               136, 20
               

               Conread position:
               1201-1415
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               137, 214
               

               Conread position:
               1201-1416
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               18, 48
               

               Conread position:
               1202-1358
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               1202-1411
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               17, 91
               

               Conread position:
               1202-1416
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               132, 21
               

               Conread position:
               1203-1388
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               165, 48
               

               Conread position:
               1203-1416
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               101, 19
               

               Conread position:
               1204-1374
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               130, 141
               

               Conread position:
               1204-1411
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               78, 154
               

               Conread position:
               1204-1416
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               130, 77
               

               Conread position:
               1205-1410
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1205-1410
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               102, 16
               

               Conread position:
               1205-1412
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               128, 26
               

               Conread position:
               1205-1412
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1205-1415
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               167, 87
               

               Conread position:
               1206-1412
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               128, 21
               

               Conread position:
               1206-1416
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               128, 22
               

               Conread position:
               1207-1345
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1207-1406
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1208-1375
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1208-1411
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1208-1412
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               44, 38
               

               Conread position:
               1208-1416
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               12, 47
               

               Conread position:
               1210-1387
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               126, 11
               

               Conread position:
               1210-1390
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 102
               

               Conread position:
               1210-1391
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               123, 11
               

               Conread position:
               1210-1403
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               71, 164
               

               Conread position:
               1210-1411
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               6, 85
               

               Conread position:
               1210-1415
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               162
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               129, 11
               

               Conread position:
               1210-1416
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               1210-1416
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               123, 11
               

               Conread position:
               1213-1367
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 8
               

               Conread position:
               1213-1369
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               1213-1411
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               11, 39
               

               Conread position:
               1213-1416
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               1213-1416
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               82, 68
               

               Conread position:
               1214-1416
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               123, 30
               

               Conread position:
               1215-1401
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               119, 31
               

               Conread position:
               1215-1404
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1215-1411
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               125, 57
               

               Conread position:
               1215-1416
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1216-1412
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               35, 47
               

               Conread position:
               1221-1376
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1221-1376
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               147, 101
               

               Conread position:
               1221-1387
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               161, 51
               

               Conread position:
               1221-1411
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               59, 148
               

               Conread position:
               1221-1416
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               43, 15
               

               Conread position:
               1222-1406
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               112, 28
               

               Conread position:
               1222-1412
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               1223-1415
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               1224-1416
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               110, 5
               

               Conread position:
               1225-1352
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1227-1402
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1227-1412
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1227-1416
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1227-1416
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               1228-1412
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               106, 93
               

               Conread position:
               1231-1416
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               1235-1413
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1242-1416
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1244-1411
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1251-1413
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               65, 115
               

               Conread position:
               1251-1414
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1253-1416
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1254-1416
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1261-1413
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1263-1416
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1274-1416
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1275-1394
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               40, 34
               

               Conread position:
               1286-1416
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1294-1409
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1298-1413
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.