Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8036G13.5 |
| Conread position: | 1-846 |
| Cow position: | chr3:18212103-18212965 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 696 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 82 |
| Conread position: | 909-1164 |
| Cow position: | chr3:18213479-18213737 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 204 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 117, 83 |
| Conread position: | 1130-1412 |
| Cow position: | chr3:18213889-18214178 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 124 |
| Conread position: | 1193-1371 |
| Cow position: | chr3:62628084-62628262 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 27, 60 |
| Conread position: | 1193-1416 |
| Cow position: | chr3:18216597-18216810 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 209, 22 |
| Conread position: | 1194-1416 |
| Cow position: | chr3:2199063-2198840 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 29, 136 |
| Conread position: | 1195-1416 |
| Cow position: | chr3:61411299-61411085 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 1196-1416 |
| Cow position: | chr3:3736479-3736256 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1196-1416 |
| Cow position: | chr3:64319359-64319154 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 172, 19 |
| Conread position: | 1197-1413 |
| Cow position: | chr3:73741692-73741909 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 26, 163 |
| Conread position: | 1197-1416 |
| Cow position: | chr3:62884373-62884165 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1197-1416 |
| Cow position: | chr3:74205633-74205847 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1198-1416 |
| Cow position: | chr3:63146982-63147194 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 136, 31 |
| Conread position: | 1199-1353 |
| Cow position: | chr3:25027577-25027422 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 19, 57 |
| Conread position: | 1199-1381 |
| Cow position: | chr3:3818957-3818776 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 116, 98 |
| Conread position: | 1199-1387 |
| Cow position: | chr3:29291854-29291675 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 119 |
| Conread position: | 1199-1411 |
| Cow position: | chr3:74611735-74611530 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1199-1412 |
| Cow position: | chr3:53588214-53588422 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1199-1412 |
| Cow position: | chr3:58175074-58174870 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1199-1412 |
| Cow position: | chr3:64172615-64172401 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 108, 112 |
| Conread position: | 1199-1416 |
| Cow position: | chr3:9630056-9629845 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 24, 114 |
| Conread position: | 1199-1416 |
| Cow position: | chr3:41718562-41718354 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1199-1416 |
| Cow position: | chr3:51492958-51492742 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1200-1404 |
| Cow position: | chr3:5845092-5844893 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 1200-1411 |
| Cow position: | chr3:40100537-40100755 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 82, 118 |
| Conread position: | 1200-1412 |
| Cow position: | chr3:15228649-15228862 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 115, 97 |
| Conread position: | 1200-1412 |
| Cow position: | chr3:75777877-75778101 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1200-1413 |
| Cow position: | chr3:25091204-25090998 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 69, 48 |
| Conread position: | 1200-1416 |
| Cow position: | chr3:37485627-37485839 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 23, 51 |
| Conread position: | 1201-1371 |
| Cow position: | chr3:43591067-43590894 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 1201-1386 |
| Cow position: | chr3:38253242-38253069 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1201-1416 |
| Cow position: | chr3:50281581-50281793 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 144, 20 |
| Conread position: | 1201-1416 |
| Cow position: | chr3:55373394-55373608 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 45, 166 |
| Conread position: | 1202-1342 |
| Cow position: | chr3:76913185-76913045 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 112, 19 |
| Conread position: | 1202-1388 |
| Cow position: | chr3:74913021-74912839 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1202-1404 |
| Cow position: | chr3:18725474-18725675 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 105, 26 |
| Conread position: | 1202-1416 |
| Cow position: | chr3:24539045-24538834 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 14, 164 |
| Conread position: | 1202-1416 |
| Cow position: | chr3:58131162-58130953 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 1202-1416 |
| Cow position: | chr3:64536395-64536602 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 25, 113 |
| Conread position: | 1203-1401 |
| Cow position: | chr3:54126089-54126279 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1203-1403 |
| Cow position: | chr3:34315654-34315846 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1203-1407 |
| Cow position: | chr3:909459-909667 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1203-1416 |
| Cow position: | chr3:57634434-57634218 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 130, 18 |
| Conread position: | 1204-1377 |
| Cow position: | chr3:26740871-26741035 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1204-1416 |
| Cow position: | chr3:9074173-9074388 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1204-1416 |
| Cow position: | chr3:20092354-20092564 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 19, 163 |
| Conread position: | 1205-1409 |
| Cow position: | chr3:77297150-77297345 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1205-1412 |
| Cow position: | chr3:39910891-39911093 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 1205-1416 |
| Cow position: | chr3:24300534-24300319 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 207 |
| Conread position: | 1206-1367 |
| Cow position: | chr3:33797846-33797686 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 128, 66 |
| Conread position: | 1206-1411 |
| Cow position: | chr3:891428-891231 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1206-1414 |
| Cow position: | chr3:22953717-22953919 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 1206-1415 |
| Cow position: | chr3:54881942-54881725 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 1206-1416 |
| Cow position: | chr3:11309975-11310183 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 160, 13 |
| Conread position: | 1206-1416 |
| Cow position: | chr3:20471201-20471407 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 84, 14 |
| Conread position: | 1206-1416 |
| Cow position: | chr3:25075999-25076209 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1207-1416 |
| Cow position: | chr3:42480781-42480576 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 10, 88 |
| Conread position: | 1208-1355 |
| Cow position: | chr3:60145381-60145234 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 93 |
| Conread position: | 1208-1358 |
| Cow position: | chr3:61914154-61914008 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1208-1411 |
| Cow position: | chr3:58764903-58765113 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 74, 13 |
| Conread position: | 1208-1414 |
| Cow position: | chr3:15221353-15221558 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1208-1415 |
| Cow position: | chr3:26088833-26089042 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 107, 13 |
| Conread position: | 1208-1416 |
| Cow position: | chr3:12255637-12255438 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1208-1416 |
| Cow position: | chr3:17633880-17634085 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1209-1388 |
| Cow position: | chr3:51441733-51441559 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1209-1402 |
| Cow position: | chr3:20993979-20993784 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 14, 103 |
| Conread position: | 1209-1412 |
| Cow position: | chr3:3036759-3036964 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 120, 12 |
| Conread position: | 1209-1416 |
| Cow position: | chr3:41550213-41550417 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1210-1408 |
| Cow position: | chr3:11919875-11920066 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1210-1413 |
| Cow position: | chr3:37186990-37186787 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1210-1414 |
| Cow position: | chr3:68342098-68342289 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1210-1416 |
| Cow position: | chr3:36100993-36100796 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1211-1407 |
| Cow position: | chr3:58447905-58448093 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1211-1407 |
| Cow position: | chr3:77490733-77490545 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 1211-1414 |
| Cow position: | chr3:73436278-73436481 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1211-1416 |
| Cow position: | chr3:15654988-15655188 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 125, 39 |
| Conread position: | 1213-1411 |
| Cow position: | chr3:22271296-22271488 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1213-1416 |
| Cow position: | chr3:8752946-8752745 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 9, 39 |
| Conread position: | 1214-1414 |
| Cow position: | chr3:23111355-23111553 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 159 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1214-1416 |
| Cow position: | chr3:30839402-30839207 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 8, 52 |
| Conread position: | 1214-1416 |
| Cow position: | chr3:49131903-49132106 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 1214-1416 |
| Cow position: | chr3:54340263-54340464 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 1215-1345 |
| Cow position: | chr3:44838410-44838287 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1215-1352 |
| Cow position: | chr3:18865874-18866011 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1215-1369 |
| Cow position: | chr3:83441393-83441546 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 72, 7 |
| Conread position: | 1215-1370 |
| Cow position: | chr3:62798631-62798781 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 119, 6 |
| Conread position: | 1215-1380 |
| Cow position: | chr3:8746076-8746238 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1215-1381 |
| Cow position: | chr3:23945276-23945116 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1215-1385 |
| Cow position: | chr3:48211662-48211499 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1215-1388 |
| Cow position: | chr3:16343767-16343597 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 119, 14 |
| Conread position: | 1215-1395 |
| Cow position: | chr3:75142430-75142598 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1215-1400 |
| Cow position: | chr3:57829927-57830114 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 61, 6 |
| Conread position: | 1215-1403 |
| Cow position: | chr3:64484407-64484219 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1215-1410 |
| Cow position: | chr3:8924200-8924010 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 7, 104 |
| Conread position: | 1215-1412 |
| Cow position: | chr3:50614800-50614602 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 1215-1414 |
| Cow position: | chr3:27532503-27532694 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1215-1414 |
| Cow position: | chr3:61116695-61116894 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 91, 13 |
| Conread position: | 1215-1416 |
| Cow position: | chr3:5601010-5601209 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 119, 40 |
| Conread position: | 1215-1416 |
| Cow position: | chr3:20158547-20158359 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1215-1416 |
| Cow position: | chr3:23091820-23092018 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1215-1416 |
| Cow position: | chr3:26493081-26493273 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1215-1416 |
| Cow position: | chr3:51780838-51781033 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 16, 31 |
| Conread position: | 1215-1416 |
| Cow position: | chr3:59608655-59608460 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1215-1416 |
| Cow position: | chr3:65771177-65771374 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 7, 70 |
| Conread position: | 1215-1416 |
| Cow position: | chr3:70354079-70354273 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 16, 109 |
| Conread position: | 1215-1416 |
| Cow position: | chr3:77225270-77225076 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1216-1416 |
| Cow position: | chr3:42584695-42584500 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 118, 77 |
| Conread position: | 1217-1387 |
| Cow position: | chr3:31247817-31247654 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1221-1403 |
| Cow position: | chr3:26835676-26835839 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1221-1412 |
| Cow position: | chr3:14505762-14505953 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1221-1412 |
| Cow position: | chr3:56483672-56483477 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 1221-1416 |
| Cow position: | chr3:31932953-31933138 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1221-1416 |
| Cow position: | chr3:48271478-48271291 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1221-1416 |
| Cow position: | chr3:55991717-55991907 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 160 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 1222-1398 |
| Cow position: | chr3:58291741-58291913 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 1222-1408 |
| Cow position: | chr3:61322988-61322810 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1225-1398 |
| Cow position: | chr3:43653969-43654134 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 36, 90 |
| Conread position: | 1227-1407 |
| Cow position: | chr3:74846560-74846743 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 55, 86 |
| Conread position: | 1227-1411 |
| Cow position: | chr3:6690397-6690218 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 1227-1416 |
| Cow position: | chr3:1004781-1004602 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 107, 54 |
| Conread position: | 1227-1416 |
| Cow position: | chr3:52835734-52835926 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 86, 151 |
| Conread position: | 1228-1369 |
| Cow position: | chr3:84112433-84112576 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1228-1412 |
| Cow position: | chr3:58632707-58632528 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 1228-1416 |
| Cow position: | chr3:48629448-48629632 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 128, 22 |
| Conread position: | 1229-1355 |
| Cow position: | chr3:44643661-44643540 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1229-1399 |
| Cow position: | chr3:34085914-34086080 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1229-1409 |
| Cow position: | chr3:35278715-35278539 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 176, 72 |
| Conread position: | 1229-1413 |
| Cow position: | chr3:10431744-10431565 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 1229-1414 |
| Cow position: | chr3:61009297-61009474 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 1229-1416 |
| Cow position: | chr3:34675867-34675680 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1229-1416 |
| Cow position: | chr3:54862278-54862455 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1230-1412 |
| Cow position: | chr3:29507725-29507543 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 105, 81 |
| Conread position: | 1230-1416 |
| Cow position: | chr3:18458524-18458701 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1231-1413 |
| Cow position: | chr3:5419721-5419899 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 1231-1416 |
| Cow position: | chr3:25251047-25250866 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 56, 134 |
| Conread position: | 1233-1393 |
| Cow position: | chr3:74701205-74701358 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1233-1411 |
| Cow position: | chr3:68262904-68262726 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 1235-1394 |
| Cow position: | chr3:46094956-46094803 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1242-1375 |
| Cow position: | chr3:22171505-22171376 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1246-1394 |
| Cow position: | chr3:36204680-36204532 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1248-1416 |
| Cow position: | chr3:42563569-42563414 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1250-1416 |
| Cow position: | chr3:53091606-53091448 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1251-1416 |
| Cow position: | chr3:4329442-4329281 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 1251-1416 |
| Cow position: | chr3:50348076-50347922 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1254-1397 |
| Cow position: | chr3:8457774-8457631 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1254-1410 |
| Cow position: | chr3:35873854-35874003 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1254-1416 |
| Cow position: | chr3:66707950-66708109 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1257-1416 |
| Cow position: | chr3:33327826-33327666 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 1258-1416 |
| Cow position: | chr3:51146556-51146708 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1259-1406 |
| Cow position: | chr3:58285794-58285936 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1259-1416 |
| Cow position: | chr3:37452179-37452030 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1265-1413 |
| Cow position: | chr3:50462445-50462301 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 1265-1416 |
| Cow position: | chr3:1300324-1300177 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1268-1414 |
| Cow position: | chr3:13909603-13909463 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 1271-1402 |
| Cow position: | chr3:31750371-31750247 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1272-1416 |
| Cow position: | chr3:27785368-27785227 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 63, 74 |
| Conread position: | 1285-1415 |
| Cow position: | chr3:28238483-28238614 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1285-1416 |
| Cow position: | chr3:58865385-58865511 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1288-1416 |
| Cow position: | chr3:55778119-55777995 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1298-1416 |
| Cow position: | chr3:15684846-15684964 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1298-1416 |
| Cow position: | chr3:44861236-44861350 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1301-1415 |
| Cow position: | chr3:18573013-18573123 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1304-1416 |
| Cow position: | chr3:40629713-40629823 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1318-1416 |
| Cow position: | chr3:77981261-77981359 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1320-1416 |
| Cow position: | chr3:74699329-74699425 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.