Cow genome map

Conread name: Ss1.1-Pig4-TMW8036G13.5

Conread position: 1184-1416
Cow position:
Alignm length: 238
Alignm identity: 175
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 33, 126

Conread position: 1188-1388
Cow position:
Alignm length: 204
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 41

Conread position: 1192-1416
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 0

Conread position: 1193-1416
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 1193-1416
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1197-1375
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 54, 37

Conread position: 1198-1411
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 19, 54

Conread position: 1198-1415
Cow position:
Alignm length: 230
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 1198-1416
Cow position:
Alignm length: 220
Alignm identity: 169
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 28, 145

Conread position: 1198-1416
Cow position:
Alignm length: 219
Alignm identity: 172
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 23, 0

Conread position: 1199-1389
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 76

Conread position: 1199-1399
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 55, 123

Conread position: 1199-1411
Cow position:
Alignm length: 219
Alignm identity: 170
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 165

Conread position: 1199-1414
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 1199-1415
Cow position:
Alignm length: 218
Alignm identity: 171
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 90, 51

Conread position: 1199-1415
Cow position:
Alignm length: 221
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 89, 22

Conread position: 1199-1416
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 74

Conread position: 1199-1416
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 93, 49

Conread position: 1199-1416
Cow position:
Alignm length: 223
Alignm identity: 167
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 114, 0

Conread position: 1200-1369
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 1200-1405
Cow position:
Alignm length: 207
Alignm identity: 156
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 148, 172

Conread position: 1200-1416
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 1201-1390
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 1201-1392
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 35

Conread position: 1201-1399
Cow position:
Alignm length: 200
Alignm identity: 139
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 113, 45

Conread position: 1201-1412
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 114, 79

Conread position: 1201-1414
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 134, 62

Conread position: 1201-1416
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 20, 0

Conread position: 1202-1358
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 1202-1365
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 1203-1414
Cow position:
Alignm length: 214
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 177

Conread position: 1203-1416
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 20, 38

Conread position: 1203-1416
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 85, 18

Conread position: 1204-1399
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 154, 29

Conread position: 1204-1407
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 73, 114

Conread position: 1204-1413
Cow position:
Alignm length: 210
Alignm identity: 159
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 17, 0

Conread position: 1204-1416
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1205-1332
Cow position:
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 1205-1384
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 155, 16

Conread position: 1205-1403
Cow position:
Alignm length: 199
Alignm identity: 156
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 34, 0

Conread position: 1205-1411
Cow position:
Alignm length: 210
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 163

Conread position: 1205-1411
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 47

Conread position: 1205-1416
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 46, 51

Conread position: 1206-1416
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 129, 0

Conread position: 1207-1365
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 14

Conread position: 1207-1368
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 1207-1386
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 1207-1413
Cow position:
Alignm length: 211
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 45

Conread position: 1207-1416
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 40, 21

Conread position: 1207-1416
Cow position:
Alignm length: 210
Alignm identity: 168
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 1207-1416
Cow position:
Alignm length: 212
Alignm identity: 165
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 13, 46

Conread position: 1207-1416
Cow position:
Alignm length: 210
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 1208-1359
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 116

Conread position: 1208-1374
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 1208-1416
Cow position:
Alignm length: 210
Alignm identity: 162
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 36, 13

Conread position: 1208-1416
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 43

Conread position: 1208-1416
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 1209-1406
Cow position:
Alignm length: 198
Alignm identity: 158
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 12, 0

Conread position: 1210-1405
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 104, 14

Conread position: 1210-1412
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 78, 11

Conread position: 1210-1412
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 102

Conread position: 1210-1413
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 41, 88

Conread position: 1210-1416
Cow position:
Alignm length: 210
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 11

Conread position: 1211-1397
Cow position:
Alignm length: 187
Alignm identity: 148
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 40, 0

Conread position: 1211-1410
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 53, 10

Conread position: 1211-1413
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 1211-1416
Cow position:
Alignm length: 207
Alignm identity: 162
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 12, 41

Conread position: 1213-1414
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1213-1416
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 185, 8

Conread position: 1214-1412
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 120, 7

Conread position: 1214-1416
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 81

Conread position: 1215-1335
Cow position:
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 1215-1357
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 1215-1381
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 106, 6

Conread position: 1215-1390
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 32

Conread position: 1215-1395
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 155, 0

Conread position: 1215-1407
Cow position:
Alignm length: 195
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 109, 6

Conread position: 1215-1411
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 1215-1412
Cow position:
Alignm length: 204
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 151

Conread position: 1215-1412
Cow position:
Alignm length: 200
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 1215-1412
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 80, 6

Conread position: 1215-1416
Cow position:
Alignm length: 202
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 1215-1416
Cow position:
Alignm length: 203
Alignm identity: 155
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 120, 103

Conread position: 1215-1416
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 136, 77

Conread position: 1215-1416
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 36, 125

Conread position: 1215-1416
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 120, 67

Conread position: 1216-1416
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 28, 5

Conread position: 1216-1416
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 1216-1416
Cow position:
Alignm length: 201
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1221-1416
Cow position:
Alignm length: 196
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 113, 0

Conread position: 1221-1416
Cow position:
Alignm length: 197
Alignm identity: 152
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 118, 0

Conread position: 1221-1416
Cow position:
Alignm length: 196
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 58, 0

Conread position: 1222-1408
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 1222-1416
Cow position:
Alignm length: 197
Alignm identity: 160
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 74, 96

Conread position: 1223-1396
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 1227-1399
Cow position:
Alignm length: 174
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 166, 0

Conread position: 1227-1410
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 109, 23

Conread position: 1227-1416
Cow position:
Alignm length: 190
Alignm identity: 150
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 1227-1416
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 62, 0

Conread position: 1228-1408
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 138

Conread position: 1228-1412
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 108, 0

Conread position: 1228-1415
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 106, 116

Conread position: 1229-1416
Cow position:
Alignm length: 188
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 1229-1416
Cow position:
Alignm length: 188
Alignm identity: 134
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 1229-1416
Cow position:
Alignm length: 188
Alignm identity: 134
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 1229-1416
Cow position:
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 64

Conread position: 1230-1408
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 104, 20

Conread position: 1231-1358
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 1233-1404
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 103, 39

Conread position: 1233-1416
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 1235-1411
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 108, 132

Conread position: 1237-1415
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 1240-1414
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 25, 66

Conread position: 1240-1415
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 121, 0

Conread position: 1241-1415
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 1241-1416
Cow position:
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 93, 0

Conread position: 1243-1390
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 142, 0

Conread position: 1243-1416
Cow position:
Alignm length: 176
Alignm identity: 136
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 107, 92

Conread position: 1243-1416
Cow position:
Alignm length: 174
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1246-1403
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 1246-1415
Cow position:
Alignm length: 171
Alignm identity: 137
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 91, 0

Conread position: 1252-1416
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 84, 25

Conread position: 1254-1401
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 69, 92

Conread position: 1255-1410
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 38

Conread position: 1258-1406
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 1259-1415
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 1264-1411
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 1265-1416
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 1282-1414
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 1285-1416
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 1298-1416
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1302-1405
Cow position:
Alignm length: 104
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1302-1412
Cow position:
Alignm length: 111
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 1304-1412
Cow position:
Alignm length: 109
Alignm identity: 92
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 1308-1416
Cow position:
Alignm length: 111
Alignm identity: 95
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 1311-1415
Cow position:
Alignm length: 105
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1316-1416
Cow position:
Alignm length: 102
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Show alignments to all cow chromosomes.