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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8036H08.3
        

               
Conread position:
               
1-127
               

               
Cow position:
               
chr16:5363472-5363606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr16:9211775-9211931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 107
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr16:17288408-17288620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr16:22124551-22124331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
44, 113
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:17400000-17400232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:22919109-22919347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
44, 112
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr16:9811872-9811635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr16:7256165-7256411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr16:18205578-18205833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 185
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr16:33458394-33458128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
48, 111
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr16:8796611-8796352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr16:19643512-19643765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr16:18678815-18679075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr16:4502898-4503159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr16:15904072-15903806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr16:26627900-26628166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 107
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr16:31159953-31159694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr16:39385018-39385287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr16:42379172-42379437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr16:50418071-50417804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr16:8481465-8481210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr16:11275617-11275350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 107
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr16:13177017-13177283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 105
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr16:15868128-15867849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr16:32327277-32327532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr16:48087252-48086993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
44, 29
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr16:49125903-49125648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
36, 112
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr16:56853572-56853837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr16:37670128-37669851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
14, 179
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:237863-238151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
44, 190
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:4058984-4059240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
44, 92
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:4103542-4103273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:4857469-4857210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
155, 18
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:7136730-7136469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:7456839-7456575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
44, 86
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:7917418-7917689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 106
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:9736213-9735946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:9973876-9973613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
231, 45
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:11105168-11105438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
44, 108
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:13307248-13306978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
44, 67
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:16265481-16265214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:16424987-16424718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:20025040-20025332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
44, 195
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:22804956-22804706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 84
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:24147775-24148043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:28431649-28431377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:30939359-30939618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:31122637-31122360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:33507683-33507952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
24, 66
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:39474518-39474252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:42079221-42078955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
44, 70
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:45233956-45234228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:48370329-48370062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:53770030-53769762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
30, 24
               

               
Conread position:
               
2-165
               

               
Cow position:
               
chr16:49742375-49742218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 107
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr16:54083325-54083523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr16:21156429-21156659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
43, 110
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr16:8620868-8621102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
23, 28
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr16:53612900-53613179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
46, 169
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr16:659712-659974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 94
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr16:24825685-24825952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
43, 101
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr16:4762748-4763017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr16:20662755-20663035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
41, 99
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr16:24228733-24228465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
27, 111
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr16:41576659-41576930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
43, 106
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr16:42073342-42073081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 110
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr16:52214154-52214430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 115
               

               
Conread position:
               
3-267
               

               
Cow position:
               
chr16:47626571-47626306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr16:55308915-55308656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr16:40333702-40333443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
42, 97
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr16:25170012-25170269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
43, 97
               

               
Conread position:
               
3-276
               

               
Cow position:
               
chr16:18051712-18051979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
43, 98
               

               
Conread position:
               
4-133
               

               
Cow position:
               
chr16:8367533-8367402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
4-155
               

               
Cow position:
               
chr16:10020446-10020301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 102
               

               
Conread position:
               
4-156
               

               
Cow position:
               
chr16:43801271-43801127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
4-160
               

               
Cow position:
               
chr16:2480008-2479858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-162
               

               
Cow position:
               
chr16:42745329-42745178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 102
               

               
Conread position:
               
4-164
               

               
Cow position:
               
chr16:21656319-21656165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-164
               

               
Cow position:
               
chr16:41623431-41623585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 106
               

               
Conread position:
               
4-164
               

               
Cow position:
               
chr16:49097116-49097270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-169
               

               
Cow position:
               
chr16:27004777-27004951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
4-176
               

               
Cow position:
               
chr16:12087033-12086872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr16:7549383-7549554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
39, 108
               

               
Conread position:
               
4-195
               

               
Cow position:
               
chr16:20260049-20260243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
42, 102
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chr16:8077043-8076857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
44, 107
               

               
Conread position:
               
4-222
               

               
Cow position:
               
chr16:44676511-44676715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 86
               

               
Conread position:
               
4-229
               

               
Cow position:
               
chr16:20559757-20559975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
4-229
               

               
Cow position:
               
chr16:30663251-30663030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 102
               

               
Conread position:
               
4-230
               

               
Cow position:
               
chr16:43563474-43563693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-235
               

               
Cow position:
               
chr16:24427123-24427348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 102
               

               
Conread position:
               
4-237
               

               
Cow position:
               
chr16:10866905-10867131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
41, 103
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr16:10368314-10368084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr16:498715-498970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
41, 193
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr16:1435463-1435697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 103
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr16:7385917-7386145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr16:11916856-11916628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 97
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr16:12283720-12283949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr16:16149543-16149315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr16:16567249-16567477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
41, 103
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr16:18212043-18211815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 107
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr16:23877627-23877855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 104
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr16:31822240-31822012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr16:33926061-33925833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 103
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr16:37387537-37387309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr16:43769795-43769567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr16:52255064-52254836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr16:55656097-55656323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr16:41652-41883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr16:825622-825855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr16:4722630-4722859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr16:5416134-5415904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 114
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr16:7075528-7075764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
33, 97
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr16:11286776-11287005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr16:25254615-25254845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr16:54179305-54179074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr16:50872560-50872317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
94, 155
               

               
Conread position:
               
4-250
               

               
Cow position:
               
chr16:45731752-45731512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-256
               

               
Cow position:
               
chr16:49779798-49779554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-260
               

               
Cow position:
               
chr16:50516285-50516035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
43, 114
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr16:45654413-45654164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
41, 99
               

               
Conread position:
               
4-262
               

               
Cow position:
               
chr16:52527380-52527630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr16:18557642-18557386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
42, 95
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr16:39429312-39429059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
4-267
               

               
Cow position:
               
chr16:23475713-23475973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-268
               

               
Cow position:
               
chr16:42161774-42161513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-268
               

               
Cow position:
               
chr16:42423318-42423057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
39, 104
               

               
Conread position:
               
4-269
               

               
Cow position:
               
chr16:19633149-19632891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:3012266-3012528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:4428390-4428652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:5108241-5107979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:5345549-5345286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:5524949-5524686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:7022053-7021790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 108
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:9014061-9013798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:11568489-11568238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:12652072-12652335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:14236888-14237151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:14679762-14680025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:15312440-15312703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:15349014-15348756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:15470519-15470798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 168
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:15495588-15495851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:15754789-15754526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:15974211-15973948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:17952570-17952833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:18374315-18374052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:18541003-18540740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:18650432-18650170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
39, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:18937243-18936984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
41, 103
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:18978339-18978598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
41, 103
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:19082198-19082461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:22912788-22913051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:23024956-23025224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:23027867-23028130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:23770300-23770038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:24408065-24408328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:26500784-26501036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:26659116-26659384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:27064247-27063985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:28143822-28144078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:28278017-28277757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 85
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:28292499-28292762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:28420286-28420008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 185
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:29106995-29106732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:31656446-31656709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:32118729-32118992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:35285115-35284852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:35342347-35342084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:35443396-35443133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:37052913-37052650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:39787851-39787587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:41152929-41153192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:41733848-41734111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:43819925-43819662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:45631650-45631913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:45647966-45647704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 92
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:46555574-46555833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:49093954-49093698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:51710511-51710249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:52095346-52095609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:52409962-52409700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:52952092-52951829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:55124446-55124184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr16:55786421-55786160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:3918152-3918411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:4399345-4399606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
41, 95
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:7702149-7702415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
27, 109
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:14611298-14611562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:14722121-14721866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:14758335-14758612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:15726741-15726490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
33, 102
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:16177440-16177698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:18426801-18427065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
42, 95
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:23066294-23066547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
151, 30
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:25965129-25965377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:28922411-28922665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
41, 82
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:29158752-29159010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:31666341-31666077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:31978568-31978307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:33102344-33102080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:42092754-42092503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
8, 95
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:42849027-42848763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:46552427-46552691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 144
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:48084084-48083821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:48341068-48340815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:50712287-50712023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:51087932-51088189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
40, 102
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:51400126-51399865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr16:52855402-52855144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 108
               

               
Conread position:
               
4-272
               

               
Cow position:
               
chr16:5350356-5350090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr16:15824814-15824559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:3147890-3147621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:3333045-3333309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:3768618-3768351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:4712523-4712785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
41, 94
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:4972405-4972136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 99
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:5726550-5726807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
41, 109
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:5867655-5867386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:6379488-6379222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:7048151-7047885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
34, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:7467762-7468032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:8651977-8652246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:8840512-8840778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:9235875-9235590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
42, 190
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:10441391-10441660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:10858006-10857738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
38, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:11100174-11099912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:11130441-11130176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 105
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:11632692-11632421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:12534817-12534550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:13330315-13330049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:14028997-14028741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:14241970-14242257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
41, 198
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:14351307-14351040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:14661971-14661715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:15188207-15188475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:15408253-15407995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:15571012-15571281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:15960694-15960406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
34, 165
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:15979225-15978956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:16236508-16236243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 105
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:16369108-16368844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:16402708-16402438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
42, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:16543678-16543960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
41, 35
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:17003355-17003628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:17142557-17142821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 101
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:17143425-17143694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:17456681-17456413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:17605909-17606181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
42, 123
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:18141706-18141452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:19757166-19756910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:20734127-20733872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
40, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:22130049-22129787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
41, 86
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:22157978-22157719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:22717230-22717487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
155, 37
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:22868584-22868290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 180
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:23532849-23532580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:23563762-23564021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
42, 96
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:23875713-23875445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:23986455-23986716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:24128322-24128590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:24215695-24215428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:24240250-24239981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:25345125-25345393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:26141998-26142266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:27670794-27671060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:28205967-28205699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:28467971-28467702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:28816488-28816209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:29051284-29051558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
41, 118
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:29089671-29089403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:29654948-29655214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:30018821-30019086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:30311485-30311225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 105
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:30638959-30639232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
42, 108
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:33133208-33133476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:33226911-33226653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:33704426-33704692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:34141267-34141530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 83
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:34809521-34809790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:37445274-37445005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:39033199-39032930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:39344017-39344280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:39394206-39394462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
240, 39
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:39616366-39616628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:40305551-40305821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 108
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:41516229-41516498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:41590408-41590660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:42218073-42217801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:42219552-42219286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
41, 95
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:43513187-43513456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:44138918-44138656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:44831145-44831414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
41, 94
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:45139288-45139557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:45609606-45609875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:46101469-46101202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
30, 100
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:46254087-46253805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
42, 192
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:47341862-47341594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:48398623-48398366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:48520077-48520346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:49126563-49126300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:49141938-49141679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:49169759-49169500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 112
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:49217941-49217673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 105
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:49230150-49229886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:50189968-50189705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
41, 99
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:50906089-50906356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:51043259-51043511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:51113253-51112991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:51578791-51578531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:51598982-51598720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:51641403-51641672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:53267344-53267608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
41, 105
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:53932348-53932082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:54287495-54287756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:54322257-54321988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:56231442-56231712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
12, 109
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:56913092-56912832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
44, 102
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:56981749-56981474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
5-202
               

               
Cow position:
               
chr16:27706597-27706407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
5-205
               

               
Cow position:
               
chr16:22320105-22319912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr16:53225183-53224956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 76
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr16:29823313-29823047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
37, 114
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr16:54578793-54579048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
40, 95
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr16:14441513-14441769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr16:55682914-55683175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
33, 101
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr16:38709198-38708950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr16:13989607-13989867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
39, 107
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr16:7083112-7082850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
42, 107
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr16:7427244-7426979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 101
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr16:7498690-7498946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr16:16096367-16096621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
40, 100
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr16:20967442-20967175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
40, 95
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr16:23737806-23738064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr16:30289937-30290202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
40, 107
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr16:40561847-40562116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 95
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr16:41752960-41752687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 100
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr16:43275643-43275907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 107
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr16:56149935-56150185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
6-176
               

               
Cow position:
               
chr16:49449724-49449562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr16:26389632-26389858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
39, 101
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr16:30027490-30027718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
6-246
               

               
Cow position:
               
chr16:33198843-33198611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 111
               

               
Conread position:
               
6-264
               

               
Cow position:
               
chr16:11619352-11619623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 194
               

               
Conread position:
               
6-267
               

               
Cow position:
               
chr16:18936429-18936181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
6-267
               

               
Cow position:
               
chr16:18979153-18979401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 104
               

               
Conread position:
               
6-270
               

               
Cow position:
               
chr16:20677465-20677207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
39, 101
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr16:2223782-2223523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr16:9497647-9497398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr16:23823389-23823139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
39, 81
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr16:30143592-30143329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 106
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr16:2724071-2723799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 100
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr16:5293282-5293549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr16:5435978-5436245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr16:7010692-7010954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
39, 106
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr16:8807468-8807206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 94
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr16:11103215-11102939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
39, 182
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr16:12159962-12159695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr16:18693532-18693247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 167
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr16:23990863-23990598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr16:24143331-24143046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr16:25445030-25445297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr16:25454325-25454057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr16:26677055-26676804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr16:39646182-39646434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr16:43804122-43804382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr16:49768595-49768328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr16:52538628-52538897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr16:56832124-56831852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
7-162
               

               
Cow position:
               
chr16:32920879-32921029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 100
               

               
Conread position:
               
7-211
               

               
Cow position:
               
chr16:32970446-32970246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
8-254
               

               
Cow position:
               
chr16:33177274-33177511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
8-263
               

               
Cow position:
               
chr16:47852988-47852747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
8-271
               

               
Cow position:
               
chr16:33777443-33777698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr16:600568-600834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr16:7665251-7665520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr16:17665263-17665521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr16:28112290-28112036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
37, 98
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr16:43537362-43537627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
37, 104
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr16:43743304-43743053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
225, 50
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr16:56589841-56590120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 184
               

               
Conread position:
               
9-162
               

               
Cow position:
               
chr16:728528-728675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-164
               

               
Cow position:
               
chr16:12485143-12484994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
9-164
               

               
Cow position:
               
chr16:33860501-33860650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-164
               

               
Cow position:
               
chr16:40878669-40878520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-223
               

               
Cow position:
               
chr16:8812948-8812741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
9-241
               

               
Cow position:
               
chr16:20503176-20503399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-241
               

               
Cow position:
               
chr16:25614478-25614701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:712338-712080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:2947205-2946947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:2960836-2961094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:6677874-6678132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:6800687-6800429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:8647014-8647272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
36, 104
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:10813039-10813297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:15424608-15424350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:16210289-16210032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:16942873-16943131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:20277361-20277103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:20761819-20762076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:24425286-24425544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:24752770-24752512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:25075750-25076008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:25880472-25880730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:26133020-26132762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
36, 104
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:26316416-26316158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
36, 104
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:27538171-27538429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
36, 104
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:29523710-29523968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
36, 101
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:34021695-34021437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:37146822-37147080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:40642830-40642572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:42211653-42211911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:44098017-44097759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
38, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:51939380-51939638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:54431116-54430858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:56281642-56281384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
9-271
               

               
Cow position:
               
chr16:9948412-9948675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
9-276
               

               
Cow position:
               
chr16:14385567-14385830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 92
               

               
Conread position:
               
9-276
               

               
Cow position:
               
chr16:25936229-25936496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
36, 94
               

               
Conread position:
               
9-276
               

               
Cow position:
               
chr16:47186542-47186279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
10-227
               

               
Cow position:
               
chr16:54298106-54298314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr16:10202778-10202549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
10-250
               

               
Cow position:
               
chr16:831949-831722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
10-265
               

               
Cow position:
               
chr16:3288659-3288904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
10-269
               

               
Cow position:
               
chr16:39683715-39683457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
10-271
               

               
Cow position:
               
chr16:7541917-7542163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
10-271
               

               
Cow position:
               
chr16:19152311-19152581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
10-271
               

               
Cow position:
               
chr16:23872026-23871768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
10-271
               

               
Cow position:
               
chr16:28695682-28695420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
36, 148
               

               
Conread position:
               
10-271
               

               
Cow position:
               
chr16:32132160-32132405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
10-271
               

               
Cow position:
               
chr16:45263721-45263462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 90
               

               
Conread position:
               
10-271
               

               
Cow position:
               
chr16:46223349-46223077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
36, 182
               

               
Conread position:
               
10-271
               

               
Cow position:
               
chr16:53814031-53813779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
34, 90
               

               
Conread position:
               
10-273
               

               
Cow position:
               
chr16:35187881-35188136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr16:675128-675382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 90
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr16:5654142-5654397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
35, 99
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr16:15255322-15255070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
36, 96
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr16:15370310-15370564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr16:18939625-18939893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr16:27027956-27028219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr16:33675132-33674869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
36, 120
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr16:36930684-36930435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr16:42970305-42970043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 102
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr16:45173922-45173661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr16:46752653-46752385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
35, 90
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr16:53509362-53509101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
35, 99
               

               
Conread position:
               
11-194
               

               
Cow position:
               
chr16:23527976-23527794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 95
               

               
Conread position:
               
11-240
               

               
Cow position:
               
chr16:8449035-8448814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
11-240
               

               
Cow position:
               
chr16:13191746-13191529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
11-242
               

               
Cow position:
               
chr16:24209241-24209019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 97
               

               
Conread position:
               
11-251
               

               
Cow position:
               
chr16:16963438-16963672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
11-252
               

               
Cow position:
               
chr16:22340716-22340945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
11-270
               

               
Cow position:
               
chr16:21012291-21012035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
34, 97
               

               
Conread position:
               
11-270
               

               
Cow position:
               
chr16:54099992-54100234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 95
               

               
Conread position:
               
11-271
               

               
Cow position:
               
chr16:41037314-41037567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 14
               

               
Conread position:
               
11-276
               

               
Cow position:
               
chr16:15188826-15189070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
11-276
               

               
Cow position:
               
chr16:23248805-23248543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
12-195
               

               
Cow position:
               
chr16:52275787-52275608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
12-270
               

               
Cow position:
               
chr16:34210785-34210533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
33, 88
               

               
Conread position:
               
12-271
               

               
Cow position:
               
chr16:31558520-31558772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 91
               

               
Conread position:
               
12-272
               

               
Cow position:
               
chr16:47773423-47773671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
12-276
               

               
Cow position:
               
chr16:4144688-4144949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 116
               

               
Conread position:
               
12-276
               

               
Cow position:
               
chr16:40109201-40109459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
13-270
               

               
Cow position:
               
chr16:19322203-19321949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 95
               

               
Conread position:
               
14-271
               

               
Cow position:
               
chr16:23673786-23674045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
14-276
               

               
Cow position:
               
chr16:14570601-14570860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
30, 93
               

               
Conread position:
               
15-254
               

               
Cow position:
               
chr16:22842438-22842187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
30, 177
               

               
Conread position:
               
15-259
               

               
Cow position:
               
chr16:10772517-10772772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
15-269
               

               
Cow position:
               
chr16:44248161-44247898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
15-270
               

               
Cow position:
               
chr16:33299025-33299272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
23, 73
               

               
Conread position:
               
15-276
               

               
Cow position:
               
chr16:13698139-13698397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
30, 91
               

               
Conread position:
               
17-241
               

               
Cow position:
               
chr16:32522847-32523062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
17-270
               

               
Cow position:
               
chr16:1257021-1257271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
28, 95
               

               
Conread position:
               
17-270
               

               
Cow position:
               
chr16:16141992-16141742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
28, 91
               

               
Conread position:
               
17-271
               

               
Cow position:
               
chr16:44744516-44744257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
30, 176
               

               
Conread position:
               
17-276
               

               
Cow position:
               
chr16:12919184-12918929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 83
               

               
Conread position:
               
17-276
               

               
Cow position:
               
chr16:40382652-40382385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 89
               

               
Conread position:
               
18-276
               

               
Cow position:
               
chr16:44973123-44973380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
19-265
               

               
Cow position:
               
chr16:52586368-52586125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
25, 64
               

               
Conread position:
               
19-276
               

               
Cow position:
               
chr16:18354308-18354067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
19-276
               

               
Cow position:
               
chr16:52789701-52789943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
20-240
               

               
Cow position:
               
chr16:46765511-46765299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
20-270
               

               
Cow position:
               
chr16:41838019-41837772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
23-269
               

               
Cow position:
               
chr16:14754690-14754444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
23-276
               

               
Cow position:
               
chr16:8706911-8706665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
23-276
               

               
Cow position:
               
chr16:9790986-9790746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 39
               

               
Conread position:
               
23-276
               

               
Cow position:
               
chr16:32905892-32906140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
24-271
               

               
Cow position:
               
chr16:46745310-46745066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
24-276
               

               
Cow position:
               
chr16:27074975-27075236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
22, 6
               

               
Conread position:
               
24-276
               

               
Cow position:
               
chr16:39514444-39514190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
21, 88
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:15416867-15416626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
26-276
               

               
Cow position:
               
chr16:44688657-44688395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
19, 148
               

               
Conread position:
               
27-242
               

               
Cow position:
               
chr16:27592466-27592260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
27-264
               

               
Cow position:
               
chr16:33406139-33405884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
19, 174
               

               
Conread position:
               
27-271
               

               
Cow position:
               
chr16:46453120-46452884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
27-276
               

               
Cow position:
               
chr16:42276453-42276710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 52
               

               
Conread position:
               
28-271
               

               
Cow position:
               
chr16:40441886-40442122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
30-270
               

               
Cow position:
               
chr16:9431821-9432058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
30-271
               

               
Cow position:
               
chr16:32586848-32587079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
30-276
               

               
Cow position:
               
chr16:51234808-51234568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
31-270
               

               
Cow position:
               
chr16:45683873-45684105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
31-270
               

               
Cow position:
               
chr16:56445755-56445519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
31-271
               

               
Cow position:
               
chr16:48096115-48095881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
14, 77
               
UCSC Genome Browser

               
Conread position:
               
31-276
               

               
Cow position:
               
chr16:30715141-30715381 (view  custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
17, 79
               
UCSC Genome Browser

               
               
               
Conread position:
31-276

               
               
               
Cow position:
chr16:48607425-48607186 (view  custom track)

               
               
               
Alignm length:
249

               
               
               
Alignm identity:
174

               
               
               
Alignm E-value:
3e-28

               
               
               
Alignm gaps (pig, cow):
15, 81
UCSC Genome Browser

               
               
               
Conread position:
31-276

               
               
               
Cow position:
chr16:54228080-54227839 (view  custom track)

               
               
               
Alignm length:
249

               
               
               
Alignm identity:
186

               
               
               
Alignm E-value:
9.99967e-42

               
               
               
Alignm gaps (pig, cow):
14, 77

               
               
               Conread position:32-254
               
               
               Cow position:chr16:47510323-47510103 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:172
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):198, 71

               
               
               Conread position:32-270
               
               
               Cow position:chr16:24988590-24988825 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:169
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):13, 76

               
               
               Conread position:34-276
               
               
               Cow position:chr16:4626741-4626506 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:177
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):191, 63

               
               
               Conread position:36-276
               
               
               Cow position:chr16:37442474-37442241 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:171
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):185, 42

               
               
               Conread position:37-196
               
               
               Cow position:chr16:11958221-11958068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:121
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):77, 66

               
               
               Conread position:37-242
               
               
               Cow position:chr16:12451193-12450992 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:139
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):71, 0

               
               
               Conread position:37-269
               
               
               Cow position:chr16:5477688-5477470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:166
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):16, 9

               
               
               Conread position:37-270
               
               
               Cow position:chr16:27276897-27276677 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):154, 60

               
               
               Conread position:37-271
               
               
               Cow position:chr16:38664052-38663828 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:178
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):188, 66

               
               
               Conread position:37-276
               
               
               Cow position:chr16:21450510-21450729 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:173
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:38-240
               
               
               Cow position:chr16:37394511-37394705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:143
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):65, 0

               
               
               Conread position:40-271
               
               
               Cow position:chr16:44899089-44898849 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:171
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):11, 128

               
               
               Conread position:43-270
               
               
               Cow position:chr16:26078259-26078480 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:162
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):189, 62

               
               
               Conread position:43-276
               
               
               Cow position:chr16:11775385-11775165 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):119, 18

               
               
               Conread position:43-276
               
               
               Cow position:chr16:13791167-13791402 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:182
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):118, 90

               
               
               Conread position:43-276
               
               
               Cow position:chr16:25288045-25287802 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:175
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):53, 120

               
               
               Conread position:43-276
               
               
               Cow position:chr16:29066830-29067053 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:181
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:43-276
               
               
               Cow position:chr16:56185795-56185572 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:159
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):160, 66

               
               
               Conread position:46-270
               
               
               Cow position:chr16:34518312-34518530 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:160
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):158, 59

               
               
               Conread position:47-271
               
               
               Cow position:chr16:11790667-11790897 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:180
               
               
               Alignm E-value:5.04467e-44
               
               
               Alignm gaps (pig, cow):46, 81

               
               
               Conread position:47-276
               
               
               Cow position:chr16:935796-935557 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:166
               
               
               Alignm E-value:7e-26
               
               
               Alignm gaps (pig, cow):54, 141

               
               
               Conread position:47-276
               
               
               Cow position:chr16:4293381-4293601 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:161
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):174, 45

               
               
               Conread position:47-276
               
               
               Cow position:chr16:16548274-16548495 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:166
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):54, 27

               
               
               Conread position:48-276
               
               
               Cow position:chr16:15762496-15762274 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:171
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):173, 61

               
               
               Conread position:49-270
               
               
               Cow position:chr16:4910860-4910652 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:171
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):48, 0

               
               
               Conread position:49-271
               
               
               Cow position:chr16:28191738-28191950 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):172, 54

               
               
               Conread position:49-276
               
               
               Cow position:chr16:5910949-5911168 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:157
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):183, 48

               
               
               Conread position:49-276
               
               
               Cow position:chr16:53554044-53553828 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:165
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):172, 48

               
               
               Conread position:50-266
               
               
               Cow position:chr16:23730267-23730059 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:168
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):173, 53

               
               
               Conread position:53-276
               
               
               Cow position:chr16:11621132-11620919 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:165
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):8, 56

               
               
               Conread position:54-241
               
               
               Cow position:chr16:12019157-12018980 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:133
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:54-260
               
               
               Cow position:chr16:42709477-42709266 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:151
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):39, 59

               
               
               Conread position:54-271
               
               
               Cow position:chr16:48956479-48956675 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:164
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:54-276
               
               
               Cow position:chr16:23472416-23472632 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:172
               
               
               Alignm E-value:3.99931e-42
               
               
               Alignm gaps (pig, cow):100, 49

               
               
               Conread position:55-276
               
               
               Cow position:chr16:1549200-1548988 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:168
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):178, 54

               
               
               Conread position:59-271
               
               
               Cow position:chr16:5845347-5845550 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:160
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):86, 46

               
               
               Conread position:59-276
               
               
               Cow position:chr16:703007-703212 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:151
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):44, 0

               
               
               Conread position:59-276
               
               
               Cow position:chr16:24213341-24213130 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:155
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):162, 44

               
               
               Conread position:61-276
               
               
               Cow position:chr16:47304580-47304789 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:152
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):171, 48

               
               
               Conread position:62-276
               
               
               Cow position:chr16:13611772-13611568 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):52, 47

               
               
               Conread position:67-276
               
               
               Cow position:chr16:28833528-28833724 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:159
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):42, 0

               
               
               Conread position:68-276
               
               
               Cow position:chr16:819942-820133 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:166
               
               
               Alignm E-value:9e-39
               
               
               Alignm gaps (pig, cow):38, 0

               
               
               Conread position:68-276
               
               
               Cow position:chr16:42242431-42242231 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:160
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):156, 29

               
               
               Conread position:69-271
               
               
               Cow position:chr16:25606785-25606983 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:142
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):97, 21

               
               
               Conread position:74-276
               
               
               Cow position:chr16:45157748-45157552 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:153
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):149, 18

               
               
               Conread position:76-240
               
               
               Cow position:chr16:18685558-18685394 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:124
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):24, 109

               
               
               Conread position:86-242
               
               
               Cow position:chr16:37401017-37401172 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:121
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):29, 20

               
               
               Conread position:88-276
               
               
               Cow position:chr16:47662416-47662597 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:150
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):135, 20

               
               
               Conread position:89-276
               
               
               Cow position:chr16:5363587-5363781 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:149
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):13, 21

               
               
               Conread position:90-249
               
               
               Cow position:chr16:52218790-52218951 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:127
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):12, 20

               
               
               Conread position:90-276
               
               
               Cow position:chr16:45813995-45813818 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:144
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):12, 20

               
               
               Conread position:90-276
               
               
               Cow position:chr16:46654986-46655170 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:140
               
               
               Alignm E-value:5e-23
               
               
               Alignm gaps (pig, cow):10, 35

               
               
               Conread position:92-235
               
               
               Cow position:chr16:44393302-44393442 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:116
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):17, 34

               
               
               Conread position:92-276
               
               
               Cow position:chr16:14106348-14106531 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:136
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):65, 92

               
               
               Conread position:94-271
               
               
               Cow position:chr16:8522685-8522515 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:140
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):10, 90

               
               
               Conread position:94-276
               
               
               Cow position:chr16:902178-901997 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:146
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):126, 12

               
               
               Conread position:95-254
               
               
               Cow position:chr16:29095659-29095812 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:119
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):17, 31

               
               
               Conread position:97-276
               
               
               Cow position:chr16:24672654-24672472 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:146
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):33, 65

               
               
               Conread position:99-271
               
               
               Cow position:chr16:13043507-13043679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:131
               
               
               Alignm E-value:7e-26
               
               
               Alignm gaps (pig, cow):122, 26

               
               
               Conread position:100-276
               
               
               Cow position:chr16:26649922-26649744 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:131
               
               
               Alignm E-value:5e-23
               
               
               Alignm gaps (pig, cow):123, 35

               
               
               Conread position:100-276
               
               
               Cow position:chr16:52889700-52889523 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:142
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):24, 14

               
               
               Conread position:101-276
               
               
               Cow position:chr16:29205748-29205573 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:126
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):9, 84

               
               
               Conread position:103-271
               
               
               Cow position:chr16:16231795-16231966 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):27, 11

               
               
               Conread position:104-276
               
               
               Cow position:chr16:17745549-17745720 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:142
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):54, 5

               
               
               Conread position:105-276
               
               
               Cow position:chr16:7619482-7619312 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:141
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):19, 78

               
               
               Conread position:108-245
               
               
               Cow position:chr16:54225987-54225851 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:139
               
               
               Alignm identity:110
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):18, 48

               
               
               Conread position:108-276
               
               
               Cow position:chr16:27004916-27005087 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:135
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):23, 78

               
               
               Conread position:114-276
               
               
               Cow position:chr16:17297310-17297470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):159, 10

               
               
               Conread position:115-241
               
               
               Cow position:chr16:11643080-11643207 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:130
               
               
               Alignm identity:101
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):12, 48

               
               
               Conread position:115-270
               
               
               Cow position:chr16:22786322-22786170 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:119
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):9, 46

               
               
               Conread position:115-272
               
               
               Cow position:chr16:19976690-19976852 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:119
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):40, 71

               
               
               Conread position:115-276
               
               
               Cow position:chr16:5636313-5636474 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:132
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):9, 73

               
               
               Conread position:115-276
               
               
               Cow position:chr16:48006767-48006602 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:126
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):20, 68

               
               
               Conread position:116-268
               
               
               Cow position:chr16:27701519-27701362 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:124
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):64, 141

               
               
               Conread position:116-270
               
               
               Cow position:chr16:28879637-28879793 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:118
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):8, 68

               
               
               Conread position:116-276
               
               
               Cow position:chr16:8367098-8366935 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:132
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):40, 8

               
               
               Conread position:116-276
               
               
               Cow position:chr16:14800014-14799859 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:119
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:116-276
               
               
               Cow position:chr16:35343749-35343587 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:125
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):105, 69

               
               
               Conread position:116-276
               
               
               Cow position:chr16:38903708-38903552 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:123
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):66, 0

               
               
               Conread position:116-276
               
               
               Cow position:chr16:43506074-43505913 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:122
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):15, 69

               
               
               Conread position:117-270
               
               
               Cow position:chr16:53086598-53086450 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:128
               
               
               Alignm E-value:5e-34
               
               
               Alignm gaps (pig, cow):7, 45

               
               
               Conread position:118-276
               
               
               Cow position:chr16:18402424-18402570 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:125
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):36, 65

               
               
               Conread position:119-271
               
               
               Cow position:chr16:45046358-45046508 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:111
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:120-242
               
               
               Cow position:chr16:44139118-44138997 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:123
               
               
               Alignm identity:97
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:120-271
               
               
               Cow position:chr16:26373222-26373074 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:122
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):17, 63

               
               
               Conread position:120-276
               
               
               Cow position:chr16:30209493-30209640 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:118
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):35, 0

               
               
               Conread position:120-276
               
               
               Cow position:chr16:46434386-46434237 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):50, 0

               
               
               Conread position:122-239
               
               
               Cow position:chr16:13579111-13578995 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:118
               
               
               Alignm identity:96
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:122-271
               
               
               Cow position:chr16:2750727-2750875 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:118
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):102, 24

               
               
               Conread position:122-276
               
               
               Cow position:chr16:5256735-5256885 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:127
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):98, 63

               
               
               Conread position:123-266
               
               
               Cow position:chr16:37718760-37718905 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:114
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):100, 37

               
               
               Conread position:123-271
               
               
               Cow position:chr16:10040104-10039959 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:113
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):6, 0

               
               
               Conread position:123-271
               
               
               Cow position:chr16:56860925-56861076 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:116
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):97, 59

               
               
               Conread position:123-276
               
               
               Cow position:chr16:3614481-3614632 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:113
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:123-276
               
               
               Cow position:chr16:7639728-7639885 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):32, 60

               
               
               Conread position:123-276
               
               
               Cow position:chr16:7997881-7997729 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:120
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):9, 65

               
               
               Conread position:123-276
               
               
               Cow position:chr16:9932889-9933044 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:126
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):36, 105

               
               
               Conread position:123-276
               
               
               Cow position:chr16:23483021-23483176 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:126
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):97, 59

               
               
               Conread position:123-276
               
               
               Cow position:chr16:33054731-33054581 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:115
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:123-276
               
               
               Cow position:chr16:34168328-34168480 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:125
               
               
               Alignm E-value:6e-36
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:123-276
               
               
               Cow position:chr16:48385668-48385515 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:124
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):98, 32

               
               
               Conread position:124-261
               
               
               Cow position:chr16:36121533-36121393 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:112
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):100, 58

               
               
               Conread position:124-270
               
               
               Cow position:chr16:19670597-19670452 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:114
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):96, 30

               
               
               Conread position:124-271
               
               
               Cow position:chr16:15320735-15320586 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):97, 58

               
               
               Conread position:124-271
               
               
               Cow position:chr16:33751932-33752076 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:117
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):92, 58

               
               
               Conread position:124-276
               
               
               Cow position:chr16:19003786-19003631 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:123
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):33, 48

               
               
               Conread position:124-276
               
               
               Cow position:chr16:37062658-37062510 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:113
               
               
               Alignm E-value:5e-23
               
               
               Alignm gaps (pig, cow):37, 0

               
               
               Conread position:124-276
               
               
               Cow position:chr16:53627689-53627542 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:122
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):58, 0

               
               
               Conread position:124-276
               
               
               Cow position:chr16:55047370-55047218 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:114
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):99, 36

               
               
               Conread position:125-239
               
               
               Cow position:chr16:18036701-18036813 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:115
               
               
               Alignm identity:92
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):57, 0

               
               
               Conread position:125-256
               
               
               Cow position:chr16:29766079-29766206 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:133
               
               
               Alignm identity:105
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):83, 30

               
               
               Conread position:125-260
               
               
               Cow position:chr16:35937071-35937209 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:108
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):107, 59

               
               
               Conread position:125-268
               
               
               Cow position:chr16:590174-590039 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:114
               
               
               Alignm E-value:7e-26
               
               
               Alignm gaps (pig, cow):57, 0

               
               
               Conread position:125-268
               
               
               Cow position:chr16:14360842-14360981 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:116
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):36, 0

               
               
               Conread position:125-269
               
               
               Cow position:chr16:51869373-51869518 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:117
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):98, 57

               
               
               Conread position:125-270
               
               
               Cow position:chr16:20476267-20476414 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:115
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):21, 62

               
               
               Conread position:125-270
               
               
               Cow position:chr16:33645749-33645894 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:117
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):113, 57

               
               
               Conread position:125-271
               
               
               Cow position:chr16:41654021-41654168 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:116
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):58, 121

               
               
               Conread position:125-274
               
               
               Cow position:chr16:37116809-37116954 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:118
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):57, 0

               
               
               Conread position:125-276
               
               
               Cow position:chr16:23033604-23033744 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:122
               
               
               Alignm E-value:7e-26
               
               
               Alignm gaps (pig, cow):120, 57

               
               
               Conread position:125-276
               
               
               Cow position:chr16:24403465-24403619 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:123
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):95, 57

               
               
               Conread position:125-276
               
               
               Cow position:chr16:24702587-24702737 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:114
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):58, 0

               
               
               Conread position:125-276
               
               
               Cow position:chr16:29379989-29380139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:120
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):57, 0

               
               
               Conread position:125-276
               
               
               Cow position:chr16:29608253-29608404 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:112
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):107, 56

               
               
               Conread position:125-276
               
               
               Cow position:chr16:39279343-39279189 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:117
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):130, 57

               
               
               Conread position:125-276
               
               
               Cow position:chr16:52861467-52861314 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:112
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):96, 55

               
               
               Conread position:125-276
               
               
               Cow position:chr16:56198253-56198407 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:114
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):98, 57

               
               
               Conread position:126-271
               
               
               Cow position:chr16:43308825-43308685 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:119
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):99, 40

               
               
               Conread position:127-242
               
               
               Cow position:chr16:47518588-47518701 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:116
               
               
               Alignm identity:95
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):6, 0

               
               
               Conread position:127-271
               
               
               Cow position:chr16:20634133-20633998 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:112
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):39, 0

               
               
               Conread position:127-271
               
               
               Cow position:chr16:48145662-48145527 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:117
               
               
               Alignm E-value:7e-26
               
               
               Alignm gaps (pig, cow):77, 57

               
               
               Conread position:127-276
               
               
               Cow position:chr16:571180-571028 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):8, 34

               
               
               Conread position:127-276
               
               
               Cow position:chr16:4979553-4979694 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:115
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):33, 0

               
               
               Conread position:127-276
               
               
               Cow position:chr16:11422044-11422196 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:114
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):8, 0

               
               
               Conread position:127-276
               
               
               Cow position:chr16:23681109-23681255 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:116
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):55, 0

               
               
               Conread position:128-271
               
               
               Cow position:chr16:35623512-35623361 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):42, 60

               
               
               Conread position:128-276
               
               
               Cow position:chr16:11449507-11449652 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:112
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):54, 0

               
               
               Conread position:129-241
               
               
               Cow position:chr16:50934394-50934284 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:113
               
               
               Alignm identity:93
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):53, 0

               
               
               Conread position:129-268
               
               
               Cow position:chr16:37380006-37380144 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:112
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):17, 56

               
               
               Conread position:129-271
               
               
               Cow position:chr16:23058697-23058553 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:108
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):104, 52

               
               
               Conread position:129-276
               
               
               Cow position:chr16:35757953-35758097 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:110
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):39, 0

               
               
               Conread position:129-276
               
               
               Cow position:chr16:42253831-42253683 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):98, 35

               
               
               Conread position:130-267
               
               
               Cow position:chr16:22052186-22052316 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:111
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):52, 0

               
               
               Conread position:130-271
               
               
               Cow position:chr16:21762560-21762419 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:113
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):91, 31

               
               
               Conread position:130-273
               
               
               Cow position:chr16:16597302-16597448 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:114
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):87, 55

               
               
               Conread position:130-276
               
               
               Cow position:chr16:26042931-26042783 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:112
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):92, 30

               
               
               Conread position:130-276
               
               
               Cow position:chr16:43724530-43724676 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:119
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):20, 51

               
               
               Conread position:131-271
               
               
               Cow position:chr16:3633033-3633174 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:111
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):90, 51

               
               
               Conread position:131-271
               
               
               Cow position:chr16:47820312-47820454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:113
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):92, 51

               
               
               Conread position:131-271
               
               
               Cow position:chr16:53892040-53891901 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:105
               
               
               Alignm E-value:5e-23
               
               
               Alignm gaps (pig, cow):52, 0

               
               
               Conread position:131-276
               
               
               Cow position:chr16:11425399-11425251 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:116
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):94, 56

               
               
               Conread position:131-276
               
               
               Cow position:chr16:46521643-46521781 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:111
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:131-276
               
               
               Cow position:chr16:47780812-47780960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:113
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):92, 53

               
               
               Conread position:131-276
               
               
               Cow position:chr16:48494815-48494668 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:115
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):90, 51

               
               
               Conread position:132-271
               
               
               Cow position:chr16:4699227-4699100 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:110
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):22, 0

               
               
               Conread position:132-276
               
               
               Cow position:chr16:35195868-35195720 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:119
               
               
               Alignm E-value:7e-26
               
               
               Alignm gaps (pig, cow):85, 28

               
               
               Conread position:132-276
               
               
               Cow position:chr16:42777705-42777852 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:123
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):100, 50

               
               
               Conread position:133-271
               
               
               Cow position:chr16:16932740-16932876 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:114
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):28, 49

               
               
               Conread position:133-271
               
               
               Cow position:chr16:18496425-18496284 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:110
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):87, 48

               
               
               Conread position:133-276
               
               
               Cow position:chr16:7429121-7429256 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:116
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:133-276
               
               
               Cow position:chr16:13195590-13195456 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:110
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:134-264
               
               
               Cow position:chr16:22850073-22850201 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:131
               
               
               Alignm identity:100
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):18, 0

               
               
               Conread position:134-276
               
               
               Cow position:chr16:33235390-33235246 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:114
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):90, 15

               
               
               Conread position:135-271
               
               
               Cow position:chr16:11615483-11615352 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:111
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):48, 0

               
               
               Conread position:135-276
               
               
               Cow position:chr16:13752378-13752239 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:116
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):42, 25

               
               
               Conread position:135-276
               
               
               Cow position:chr16:19408768-19408631 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:113
               
               
               Alignm E-value:7e-26
               
               
               Alignm gaps (pig, cow):27, 49

               
               
               Conread position:135-276
               
               
               Cow position:chr16:39164991-39165129 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:111
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):25, 0

               
               
               Conread position:137-276
               
               
               Cow position:chr16:51070182-51070040 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:110
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):19, 50

               
               
               Conread position:139-271
               
               
               Cow position:chr16:30909182-30909047 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:110
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):86, 43

               
               
               Conread position:139-271
               
               
               Cow position:chr16:42633999-42633875 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:133
               
               
               Alignm identity:106
               
               
               Alignm E-value:5e-23
               
               
               Alignm gaps (pig, cow):43, 0

               
               
               Conread position:139-276
               
               
               Cow position:chr16:9728953-9729089 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:139
               
               
               Alignm identity:111
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):96, 43

               
               
               Conread position:139-276
               
               
               Cow position:chr16:11008093-11008230 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:109
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):86, 11

               
               
               Conread position:139-276
               
               
               Cow position:chr16:38905477-38905344 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:109
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):43, 0

               
               
               Conread position:140-276
               
               
               Cow position:chr16:13969629-13969495 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:104
               
               
               Alignm E-value:5e-23
               
               
               Alignm gaps (pig, cow):42, 0

               
               
               Conread position:140-276
               
               
               Cow position:chr16:14568734-14568596 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:112
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):85, 20

               
               
               Conread position:140-276
               
               
               Cow position:chr16:18574135-18574274 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:110
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):92, 42

               
               
               Conread position:140-276
               
               
               Cow position:chr16:26610384-26610523 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:112
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):85, 8

               
               
               Conread position:143-276
               
               
               Cow position:chr16:47620133-47620266 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:108
               
               
               Alignm E-value:5e-23
               
               
               Alignm gaps (pig, cow):82, 39

               
               
               Conread position:144-276
               
               
               Cow position:chr16:8280035-8279901 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:109
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):77, 38

               
               
               Conread position:145-276
               
               
               Cow position:chr16:29557876-29557742 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:109
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):80, 38

               
               
               Conread position:145-276
               
               
               Cow position:chr16:52802395-52802529 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:107
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):75, 38

               
               
               Conread position:147-258
               
               
               Cow position:chr16:8325693-8325584 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:112
               
               
               Alignm identity:93
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):35, 0

               
               
               Conread position:147-271
               
               
               Cow position:chr16:47336487-47336610 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:125
               
               
               Alignm identity:103
               
               
               Alignm E-value:9e-29
               
               
               Alignm gaps (pig, cow):36, 0

               
               
               Conread position:147-276
               
               
               Cow position:chr16:15504765-15504637 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:134
               
               
               Alignm identity:105
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):77, 15

               
               
               Conread position:148-276
               
               
               Cow position:chr16:30096372-30096245 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:129
               
               
               Alignm identity:97
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):35, 0

               
               
               Conread position:150-270
               
               
               Cow position:chr16:7152414-7152293 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:123
               
               
               Alignm identity:102
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):12, 34

               
               
               Conread position:151-271
               
               
               Cow position:chr16:11274670-11274791 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:123
               
               
               Alignm identity:100
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):79, 32

               
               
               Conread position:151-276
               
               
               Cow position:chr16:4134627-4134755 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:130
               
               
               Alignm identity:100
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):70, 32

               
               
               Conread position:154-276
               
               
               Cow position:chr16:45534947-45535065 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:123
               
               
               Alignm identity:102
               
               
               Alignm E-value:7e-26
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:155-270
               
               
               Cow position:chr16:30037229-30037112 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:120
               
               
               Alignm identity:96
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):66, 24

               
               
               Conread position:156-276
               
               
               Cow position:chr16:39695711-39695588 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:125
               
               
               Alignm identity:98
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):69, 27

               
               
               Conread position:159-259
               
               
               Cow position:chr16:12106433-12106532 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:101
               
               
               Alignm identity:84
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):25, 0

               
               
               Conread position:161-271
               
               
               Cow position:chr16:32781133-32781246 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:115
               
               
               Alignm identity:93
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):61, 23

               
               
               Conread position:162-276
               
               
               Cow position:chr16:27249181-27249295 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:115
               
               
               Alignm identity:90
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:173-276
               
               
               Cow position:chr16:45677069-45676967 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:104
               
               
               Alignm identity:86
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):10, 0

               
               
               Conread position:191-276
               
               
               Cow position:chr16:14685589-14685504 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:86
               
               
               Alignm identity:75
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):0, 0
Show alignments to all cow chromosomes.