Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8036I19.3
        

               Conread position:
               479-876
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               272
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               123, 16
               

               Conread position:
               491-860
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 32
               

               Conread position:
               495-874
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               255
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               500-833
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               27, 69
               

               Conread position:
               500-876
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 8
               

               Conread position:
               501-890
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 19
               

               Conread position:
               503-678
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 20
               

               Conread position:
               503-831
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               164, 19
               

               Conread position:
               503-858
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               250
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               99, 19
               

               Conread position:
               503-858
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               107, 19
               

               Conread position:
               503-861
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 20
               

               Conread position:
               503-876
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               104, 19
               

               Conread position:
               504-850
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               504-860
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               195, 18
               

               Conread position:
               505-699
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               112, 17
               

               Conread position:
               505-868
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               181, 17
               

               Conread position:
               508-766
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               102, 14
               

               Conread position:
               508-876
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               155, 6
               

               Conread position:
               509-861
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               98, 13
               

               Conread position:
               509-874
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               259
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               101, 24
               

               Conread position:
               510-693
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               113, 12
               

               Conread position:
               511-733
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               96, 11
               

               Conread position:
               512-860
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               111, 10
               

               Conread position:
               512-890
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               110, 10
               

               Conread position:
               513-839
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               110, 9
               

               Conread position:
               513-859
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               94, 9
               

               Conread position:
               514-815
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               15, 61
               

               Conread position:
               514-890
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               93, 8
               

               Conread position:
               520-874
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               207, 50
               

               Conread position:
               522-699
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               522-760
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               87, 50
               

               Conread position:
               522-870
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               101, 16
               

               Conread position:
               522-874
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               26, 52
               

               Conread position:
               522-875
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               88, 25
               

               Conread position:
               522-879
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               132, 47
               

               Conread position:
               525-853
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               86, 47
               

               Conread position:
               525-871
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               83, 25
               

               Conread position:
               525-876
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               169, 25
               

               Conread position:
               525-876
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               64, 47
               

               Conread position:
               525-876
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               255
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               97, 29
               

               Conread position:
               525-877
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               249
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               137, 48
               

               Conread position:
               526-876
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               46, 13
               

               Conread position:
               528-876
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               83, 44
               

               Conread position:
               528-891
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               79, 45
               

               Conread position:
               530-876
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               77, 17
               

               Conread position:
               547-876
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               64, 25
               

               Conread position:
               554-815
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 18
               

               Conread position:
               555-862
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               99, 17
               

               Conread position:
               555-876
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               63, 15
               

               Conread position:
               557-876
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 81
               

               Conread position:
               557-890
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               6, 17
               

               Conread position:
               559-893
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               66, 39
               

               Conread position:
               560-876
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               47, 7
               

               Conread position:
               562-860
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               571-889
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               35, 296
               

               Conread position:
               573-883
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               85, 38
               

               Conread position:
               610-876
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 74
               

               Conread position:
               610-876
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               12, 129
               

               Conread position:
               611-861
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               11, 229
               

               Conread position:
               617-876
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 73
               

               Conread position:
               624-860
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               26, 191
               

               Conread position:
               624-874
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               31, 158
               

               Conread position:
               624-888
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               77, 48
               

               Conread position:
               627-871
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               36, 63
               

               Conread position:
               628-875
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               631-873
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               645-879
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               12, 68
               

               Conread position:
               689-884
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               42, 21
               

               Conread position:
               716-876
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               142, 8
               

               Conread position:
               719-874
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               719-881
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 79
               

               Conread position:
               722-876
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               729-876
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               85, 0
               
Show alignments to all cow chromosomes.