Cow genome map

Conread name: Ss1.1-Pig4-TMW8036I19.3

Conread position: 429-778
Cow position:
Alignm length: 362
Alignm identity: 250
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 29, 24

Conread position: 494-860
Cow position:
Alignm length: 376
Alignm identity: 242
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 118, 23

Conread position: 495-850
Cow position:
Alignm length: 378
Alignm identity: 267
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 112, 25

Conread position: 498-893
Cow position:
Alignm length: 412
Alignm identity: 274
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 113, 10

Conread position: 499-777
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 9

Conread position: 499-890
Cow position:
Alignm length: 411
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 78

Conread position: 500-692
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 106, 8

Conread position: 502-655
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 104, 20

Conread position: 502-885
Cow position:
Alignm length: 400
Alignm identity: 260
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 105, 70

Conread position: 503-685
Cow position:
Alignm length: 186
Alignm identity: 142
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 108, 19

Conread position: 503-685
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 162, 67

Conread position: 503-794
Cow position:
Alignm length: 297
Alignm identity: 194
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 104, 19

Conread position: 503-849
Cow position:
Alignm length: 364
Alignm identity: 241
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 108, 19

Conread position: 503-876
Cow position:
Alignm length: 390
Alignm identity: 260
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 104, 19

Conread position: 503-876
Cow position:
Alignm length: 381
Alignm identity: 261
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 104, 14

Conread position: 503-876
Cow position:
Alignm length: 394
Alignm identity: 268
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 107, 68

Conread position: 503-876
Cow position:
Alignm length: 385
Alignm identity: 255
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 20

Conread position: 503-883
Cow position:
Alignm length: 396
Alignm identity: 267
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 20, 49

Conread position: 504-764
Cow position:
Alignm length: 269
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 103, 17

Conread position: 504-871
Cow position:
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 18

Conread position: 504-876
Cow position:
Alignm length: 385
Alignm identity: 253
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 50, 18

Conread position: 504-882
Cow position:
Alignm length: 392
Alignm identity: 251
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 103, 38

Conread position: 505-680
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 158, 17

Conread position: 505-696
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 77, 17

Conread position: 505-877
Cow position:
Alignm length: 392
Alignm identity: 261
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 47, 17

Conread position: 506-795
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 96, 7

Conread position: 506-876
Cow position:
Alignm length: 390
Alignm identity: 261
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 9, 67

Conread position: 506-893
Cow position:
Alignm length: 404
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 13

Conread position: 507-809
Cow position:
Alignm length: 315
Alignm identity: 216
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 65

Conread position: 507-846
Cow position:
Alignm length: 354
Alignm identity: 242
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 15

Conread position: 507-876
Cow position:
Alignm length: 387
Alignm identity: 250
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 74, 15

Conread position: 507-890
Cow position:
Alignm length: 394
Alignm identity: 251
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 7

Conread position: 508-696
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 97, 14

Conread position: 508-877
Cow position:
Alignm length: 379
Alignm identity: 261
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 83, 14

Conread position: 508-877
Cow position:
Alignm length: 388
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 11

Conread position: 508-888
Cow position:
Alignm length: 395
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 14

Conread position: 509-765
Cow position:
Alignm length: 276
Alignm identity: 194
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 80, 8

Conread position: 509-872
Cow position:
Alignm length: 383
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 117, 18

Conread position: 509-893
Cow position:
Alignm length: 400
Alignm identity: 232
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 151, 63

Conread position: 509-893
Cow position:
Alignm length: 404
Alignm identity: 271
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 24, 13

Conread position: 513-801
Cow position:
Alignm length: 297
Alignm identity: 195
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 9

Conread position: 513-874
Cow position:
Alignm length: 371
Alignm identity: 247
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 94, 9

Conread position: 513-876
Cow position:
Alignm length: 373
Alignm identity: 260
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 109, 9

Conread position: 514-853
Cow position:
Alignm length: 352
Alignm identity: 233
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 8

Conread position: 514-859
Cow position:
Alignm length: 356
Alignm identity: 236
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 36, 42

Conread position: 514-891
Cow position:
Alignm length: 393
Alignm identity: 261
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 84, 8

Conread position: 516-882
Cow position:
Alignm length: 374
Alignm identity: 253
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 125, 23

Conread position: 517-777
Cow position:
Alignm length: 276
Alignm identity: 193
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 90, 10

Conread position: 517-876
Cow position:
Alignm length: 376
Alignm identity: 253
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 71, 55

Conread position: 519-837
Cow position:
Alignm length: 333
Alignm identity: 219
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 47

Conread position: 522-781
Cow position:
Alignm length: 278
Alignm identity: 198
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 72, 21

Conread position: 522-815
Cow position:
Alignm length: 303
Alignm identity: 208
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 136, 50

Conread position: 522-860
Cow position:
Alignm length: 349
Alignm identity: 233
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 33, 51

Conread position: 524-772
Cow position:
Alignm length: 252
Alignm identity: 170
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 172, 21

Conread position: 525-846
Cow position:
Alignm length: 327
Alignm identity: 219
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 80, 197

Conread position: 525-874
Cow position:
Alignm length: 353
Alignm identity: 231
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 97, 27

Conread position: 525-876
Cow position:
Alignm length: 370
Alignm identity: 260
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 72, 47

Conread position: 525-881
Cow position:
Alignm length: 373
Alignm identity: 254
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 85, 47

Conread position: 525-882
Cow position:
Alignm length: 362
Alignm identity: 237
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 47

Conread position: 525-899
Cow position:
Alignm length: 391
Alignm identity: 263
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 82, 43

Conread position: 526-669
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 137, 44

Conread position: 527-808
Cow position:
Alignm length: 284
Alignm identity: 185
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 46

Conread position: 528-890
Cow position:
Alignm length: 377
Alignm identity: 248
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 42

Conread position: 529-876
Cow position:
Alignm length: 357
Alignm identity: 247
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 62, 43

Conread position: 531-876
Cow position:
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 11

Conread position: 538-860
Cow position:
Alignm length: 336
Alignm identity: 223
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 23, 35

Conread position: 548-860
Cow position:
Alignm length: 317
Alignm identity: 209
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 25

Conread position: 550-876
Cow position:
Alignm length: 332
Alignm identity: 218
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 23

Conread position: 550-876
Cow position:
Alignm length: 346
Alignm identity: 237
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 55, 22

Conread position: 554-882
Cow position:
Alignm length: 333
Alignm identity: 231
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 76, 19

Conread position: 555-875
Cow position:
Alignm length: 338
Alignm identity: 228
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 70, 17

Conread position: 555-876
Cow position:
Alignm length: 342
Alignm identity: 226
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 20

Conread position: 555-876
Cow position:
Alignm length: 330
Alignm identity: 227
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 62, 15

Conread position: 557-890
Cow position:
Alignm length: 346
Alignm identity: 232
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 106, 11

Conread position: 560-876
Cow position:
Alignm length: 332
Alignm identity: 222
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 12

Conread position: 560-876
Cow position:
Alignm length: 331
Alignm identity: 220
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 12

Conread position: 560-881
Cow position:
Alignm length: 339
Alignm identity: 220
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 12

Conread position: 560-890
Cow position:
Alignm length: 337
Alignm identity: 224
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 13

Conread position: 564-871
Cow position:
Alignm length: 323
Alignm identity: 212
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 8

Conread position: 571-889
Cow position:
Alignm length: 329
Alignm identity: 214
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 571-890
Cow position:
Alignm length: 338
Alignm identity: 232
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 38, 77

Conread position: 573-890
Cow position:
Alignm length: 328
Alignm identity: 227
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 87, 41

Conread position: 575-876
Cow position:
Alignm length: 313
Alignm identity: 224
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 120, 32

Conread position: 578-882
Cow position:
Alignm length: 316
Alignm identity: 210
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 31

Conread position: 582-839
Cow position:
Alignm length: 269
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 207

Conread position: 584-890
Cow position:
Alignm length: 319
Alignm identity: 213
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 236

Conread position: 585-876
Cow position:
Alignm length: 305
Alignm identity: 209
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 26, 209

Conread position: 604-876
Cow position:
Alignm length: 288
Alignm identity: 193
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 22, 14

Conread position: 608-874
Cow position:
Alignm length: 275
Alignm identity: 194
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 609-798
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 140

Conread position: 610-830
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 31

Conread position: 610-859
Cow position:
Alignm length: 261
Alignm identity: 176
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 138

Conread position: 611-874
Cow position:
Alignm length: 276
Alignm identity: 190
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 24

Conread position: 611-899
Cow position:
Alignm length: 295
Alignm identity: 200
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 49, 28

Conread position: 613-876
Cow position:
Alignm length: 274
Alignm identity: 186
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 9, 149

Conread position: 616-876
Cow position:
Alignm length: 269
Alignm identity: 185
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 47, 34

Conread position: 618-872
Cow position:
Alignm length: 273
Alignm identity: 190
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 621-876
Cow position:
Alignm length: 283
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 24

Conread position: 624-874
Cow position:
Alignm length: 260
Alignm identity: 178
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 61

Conread position: 625-884
Cow position:
Alignm length: 269
Alignm identity: 180
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 19

Conread position: 625-893
Cow position:
Alignm length: 281
Alignm identity: 186
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 629-869
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 28

Conread position: 639-893
Cow position:
Alignm length: 268
Alignm identity: 183
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 73

Conread position: 655-875
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 56

Conread position: 675-846
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 90

Conread position: 706-875
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 710-877
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 98, 145

Conread position: 712-876
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 20, 50

Conread position: 719-874
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 719-890
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 99

Conread position: 729-876
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 30

Conread position: 729-890
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 748-890
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 34

Show alignments to all cow chromosomes.