Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8036I19.3 |
| Conread position: | 500-806 |
| Cow position: | chr12:6785191-6785493 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 111, 27 |
| Conread position: | 500-861 |
| Cow position: | chr12:48469135-48468784 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 17 |
| Conread position: | 502-688 |
| Cow position: | chr12:12837250-12837436 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 503-834 |
| Cow position: | chr12:8560102-8560444 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 53, 19 |
| Conread position: | 503-876 |
| Cow position: | chr12:16339668-16340057 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 504-892 |
| Cow position: | chr12:11749749-11750132 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 505-876 |
| Cow position: | chr12:16402158-16401791 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 162, 17 |
| Conread position: | 507-803 |
| Cow position: | chr12:15495806-15495508 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 67 |
| Conread position: | 507-810 |
| Cow position: | chr12:3828832-3828526 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 193, 70 |
| Conread position: | 507-876 |
| Cow position: | chr12:18782197-18781828 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 67 |
| Conread position: | 508-880 |
| Cow position: | chr12:23786687-23787065 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 509-681 |
| Cow position: | chr12:37987431-37987258 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 96, 13 |
| Conread position: | 509-797 |
| Cow position: | chr12:43967087-43967372 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 8, 14 |
| Conread position: | 509-815 |
| Cow position: | chr12:16741397-16741087 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 101, 13 |
| Conread position: | 512-890 |
| Cow position: | chr12:6118539-6118927 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 151, 10 |
| Conread position: | 514-860 |
| Cow position: | chr12:16842458-16842806 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 99, 8 |
| Conread position: | 526-890 |
| Cow position: | chr12:8888795-8889166 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 57, 20 |
| Conread position: | 555-886 |
| Cow position: | chr12:25532104-25531759 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 52, 22 |
| Conread position: | 557-877 |
| Cow position: | chr12:8020052-8019720 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 7, 14 |
| Conread position: | 603-880 |
| Cow position: | chr12:3840801-3840531 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 128, 9 |
| Conread position: | 629-872 |
| Cow position: | chr12:17782516-17782769 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 99 |
| Conread position: | 677-895 |
| Cow position: | chr12:2977813-2978037 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 36, 27 |
Show alignments to all cow chromosomes.