Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8036I19.3 |
| Conread position: | 494-876 |
| Cow position: | chr14:32924399-32924796 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 276 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 113, 25 |
| Conread position: | 501-748 |
| Cow position: | chr14:38060314-38060568 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 12, 27 |
| Conread position: | 502-860 |
| Cow position: | chr14:47482036-47482405 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 71 |
| Conread position: | 504-874 |
| Cow position: | chr14:19792424-19792802 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 505-656 |
| Cow position: | chr14:18880693-18880544 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 505-876 |
| Cow position: | chr14:42595629-42596017 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 102, 17 |
| Conread position: | 507-848 |
| Cow position: | chr14:1806445-1806099 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 254 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 98, 13 |
| Conread position: | 508-705 |
| Cow position: | chr14:27207474-27207673 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 32, 66 |
| Conread position: | 508-812 |
| Cow position: | chr14:31697975-31697671 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 99, 64 |
| Conread position: | 508-828 |
| Cow position: | chr14:14234587-14234254 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 508-844 |
| Cow position: | chr14:8996179-8995837 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 99, 14 |
| Conread position: | 509-753 |
| Cow position: | chr14:33600934-33601188 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 65 |
| Conread position: | 509-861 |
| Cow position: | chr14:28117410-28117771 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 69, 18 |
| Conread position: | 509-893 |
| Cow position: | chr14:29732066-29732431 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 101, 13 |
| Conread position: | 510-791 |
| Cow position: | chr14:25132170-25132462 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 98, 12 |
| Conread position: | 510-876 |
| Cow position: | chr14:7962558-7962918 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 513-882 |
| Cow position: | chr14:41921702-41921313 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 42, 9 |
| Conread position: | 514-877 |
| Cow position: | chr14:5052209-5051834 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 97, 8 |
| Conread position: | 522-861 |
| Cow position: | chr14:35527437-35527096 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 67, 50 |
| Conread position: | 522-890 |
| Cow position: | chr14:17667365-17667734 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 251 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 43, 23 |
| Conread position: | 525-876 |
| Cow position: | chr14:20469272-20468930 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 247 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 145, 27 |
| Conread position: | 526-815 |
| Cow position: | chr14:29115385-29115672 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 47 |
| Conread position: | 527-880 |
| Cow position: | chr14:20913593-20913226 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 528-851 |
| Cow position: | chr14:195720-195390 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 48 |
| Conread position: | 528-876 |
| Cow position: | chr14:38538657-38539010 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 89, 45 |
| Conread position: | 533-768 |
| Cow position: | chr14:20655275-20655024 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 39 |
| Conread position: | 547-784 |
| Cow position: | chr14:12400916-12401153 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 64, 13 |
| Conread position: | 547-839 |
| Cow position: | chr14:48897556-48897253 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 117, 16 |
| Conread position: | 547-860 |
| Cow position: | chr14:42801538-42801869 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 548-839 |
| Cow position: | chr14:20523314-20523625 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 24, 123 |
| Conread position: | 555-876 |
| Cow position: | chr14:30270961-30271301 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 555-890 |
| Cow position: | chr14:41635111-41634783 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 176, 20 |
| Conread position: | 557-876 |
| Cow position: | chr14:1734317-1734629 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 557-876 |
| Cow position: | chr14:35666197-35666507 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 48, 15 |
| Conread position: | 558-876 |
| Cow position: | chr14:21691899-21691572 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 560-871 |
| Cow position: | chr14:7882485-7882809 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 128, 12 |
| Conread position: | 575-890 |
| Cow position: | chr14:6548161-6547842 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 225 |
| Conread position: | 583-877 |
| Cow position: | chr14:19058222-19057913 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 81, 98 |
| Conread position: | 585-832 |
| Cow position: | chr14:18242278-18242019 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 24 |
| Conread position: | 585-874 |
| Cow position: | chr14:7964771-7964473 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 106, 69 |
| Conread position: | 591-873 |
| Cow position: | chr14:13418198-13418484 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 130 |
| Conread position: | 610-890 |
| Cow position: | chr14:39504833-39505126 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 625-872 |
| Cow position: | chr14:31184157-31183896 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 21 |
| Conread position: | 638-876 |
| Cow position: | chr14:37790658-37790422 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 25, 80 |
| Conread position: | 722-893 |
| Cow position: | chr14:34661905-34662080 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 729-890 |
| Cow position: | chr14:16191223-16191057 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
Show alignments to all cow chromosomes.