Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8036I19.3
        

               Conread position:
               488-860
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               270
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               21, 5
               

               Conread position:
               488-876
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               12, 35
               

               Conread position:
               489-890
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               503-647
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               105, 19
               

               Conread position:
               503-756
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               23, 70
               

               Conread position:
               503-890
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               120, 10
               

               Conread position:
               504-728
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               85, 18
               

               Conread position:
               505-828
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               237
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               141, 13
               

               Conread position:
               505-876
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               506-714
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               105, 16
               

               Conread position:
               506-874
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               9, 23
               

               Conread position:
               508-820
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               90, 14
               

               Conread position:
               509-876
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               247
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               62, 13
               

               Conread position:
               513-817
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               36, 9
               

               Conread position:
               513-876
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 9
               

               Conread position:
               514-846
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               238
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               102, 8
               

               Conread position:
               514-876
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               8, 59
               

               Conread position:
               520-815
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               19, 10
               

               Conread position:
               520-876
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               6, 52
               

               Conread position:
               521-876
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               248
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               56, 159
               

               Conread position:
               522-786
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               522-801
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               141, 49
               

               Conread position:
               522-863
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               29, 49
               

               Conread position:
               522-865
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               106, 51
               

               Conread position:
               522-875
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               50, 97
               

               Conread position:
               522-876
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               27, 33
               

               Conread position:
               523-795
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               113, 48
               

               Conread position:
               523-876
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               17, 47
               

               Conread position:
               525-815
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               38, 29
               

               Conread position:
               525-876
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               238
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               92, 45
               

               Conread position:
               527-892
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               37, 25
               

               Conread position:
               528-876
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               135, 44
               

               Conread position:
               538-876
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               240
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               60, 35
               

               Conread position:
               539-865
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               544-796
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               78, 9
               

               Conread position:
               548-875
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               20, 25
               

               Conread position:
               557-796
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               92, 54
               

               Conread position:
               557-860
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               54, 16
               

               Conread position:
               557-871
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               8, 16
               

               Conread position:
               557-876
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               7, 16
               

               Conread position:
               557-876
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               15, 52
               

               Conread position:
               557-877
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               8, 17
               

               Conread position:
               557-893
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               17, 11
               

               Conread position:
               558-876
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               17, 104
               

               Conread position:
               560-831
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               47, 13
               

               Conread position:
               561-873
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 11
               

               Conread position:
               562-875
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 10
               

               Conread position:
               562-876
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               49, 10
               

               Conread position:
               562-899
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               46, 10
               

               Conread position:
               571-877
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               30, 94
               

               Conread position:
               571-890
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               99, 36
               

               Conread position:
               572-878
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               82, 22
               

               Conread position:
               595-893
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               12, 39
               

               Conread position:
               603-860
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               20, 250
               

               Conread position:
               621-876
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               43, 183
               

               Conread position:
               624-876
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 19
               

               Conread position:
               631-876
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               650-868
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 0
               
Show alignments to all cow chromosomes.