Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8036I19.3 |
| Conread position: | 500-785 |
| Cow position: | chr20:14428227-14428517 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 23 |
| Conread position: | 500-876 |
| Cow position: | chr20:2057337-2057713 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 502-839 |
| Cow position: | chr20:27404816-27405137 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 161, 20 |
| Conread position: | 502-876 |
| Cow position: | chr20:5197265-5197639 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 503-860 |
| Cow position: | chr20:8407287-8406932 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 70, 19 |
| Conread position: | 503-890 |
| Cow position: | chr20:1049467-1049864 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 43, 24 |
| Conread position: | 504-876 |
| Cow position: | chr20:27441619-27441999 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 68, 18 |
| Conread position: | 504-879 |
| Cow position: | chr20:5676629-5676249 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 159, 18 |
| Conread position: | 506-834 |
| Cow position: | chr20:42283350-42283009 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 98, 65 |
| Conread position: | 514-876 |
| Cow position: | chr20:2946544-2946178 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 91, 17 |
| Conread position: | 522-876 |
| Cow position: | chr20:26402011-26402385 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 260 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 13, 57 |
| Conread position: | 524-893 |
| Cow position: | chr20:5006799-5007183 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 134, 17 |
| Conread position: | 525-860 |
| Cow position: | chr20:3446778-3446423 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 97, 47 |
| Conread position: | 528-828 |
| Cow position: | chr20:26321545-26321858 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 42 |
| Conread position: | 531-876 |
| Cow position: | chr20:2177965-2178323 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 17 |
| Conread position: | 541-800 |
| Cow position: | chr20:7967815-7967555 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 554-893 |
| Cow position: | chr20:27002852-27002514 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 57, 18 |
| Conread position: | 557-893 |
| Cow position: | chr20:24697677-24697339 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 50, 108 |
| Conread position: | 562-877 |
| Cow position: | chr20:34287764-34287430 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 43, 10 |
| Conread position: | 571-832 |
| Cow position: | chr20:26318998-26319267 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 37, 72 |
| Conread position: | 577-890 |
| Cow position: | chr20:28541120-28540816 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 84 |
| Conread position: | 648-899 |
| Cow position: | chr20:34406991-34407241 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 719-864 |
| Cow position: | chr20:9289812-9289960 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.