Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8036I19.3 |
| Conread position: | 484-860 |
| Cow position: | chr22:8243676-8243276 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 264 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 236 |
| Conread position: | 486-876 |
| Cow position: | chr22:20858985-20858595 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 75, 36 |
| Conread position: | 498-667 |
| Cow position: | chr22:2698725-2698553 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 498-853 |
| Cow position: | chr22:37842312-37842691 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 251 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 500-876 |
| Cow position: | chr22:28754908-28754523 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 7, 56 |
| Conread position: | 501-876 |
| Cow position: | chr22:36320618-36320233 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 157, 13 |
| Conread position: | 502-801 |
| Cow position: | chr22:27998326-27998017 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 502-874 |
| Cow position: | chr22:11090345-11089972 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 128, 12 |
| Conread position: | 502-876 |
| Cow position: | chr22:35403194-35402817 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 255 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 503-694 |
| Cow position: | chr22:6299463-6299656 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 71 |
| Conread position: | 503-877 |
| Cow position: | chr22:10727536-10727920 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 104, 16 |
| Conread position: | 504-860 |
| Cow position: | chr22:13263989-13264330 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 68, 18 |
| Conread position: | 504-888 |
| Cow position: | chr22:22174322-22173924 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 505-879 |
| Cow position: | chr22:4637260-4637640 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 267 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 505-892 |
| Cow position: | chr22:44671809-44671410 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 280 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 506-869 |
| Cow position: | chr22:23095054-23095424 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 81, 15 |
| Conread position: | 508-656 |
| Cow position: | chr22:33699598-33699742 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 508-869 |
| Cow position: | chr22:16685290-16685672 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 57, 14 |
| Conread position: | 508-871 |
| Cow position: | chr22:7484631-7485020 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 64, 14 |
| Conread position: | 508-873 |
| Cow position: | chr22:27666626-27666253 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 99, 14 |
| Conread position: | 508-874 |
| Cow position: | chr22:35691582-35691936 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 147, 14 |
| Conread position: | 509-785 |
| Cow position: | chr22:36297055-36297337 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 509-869 |
| Cow position: | chr22:44654850-44654498 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 18 |
| Conread position: | 511-895 |
| Cow position: | chr22:34085067-34085470 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 277 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 512-874 |
| Cow position: | chr22:12690620-12690993 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 519-773 |
| Cow position: | chr22:8231136-8231395 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 521-874 |
| Cow position: | chr22:27486901-27486541 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 87, 51 |
| Conread position: | 523-890 |
| Cow position: | chr22:30319982-30319605 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 237 |
| Conread position: | 524-900 |
| Cow position: | chr22:40776944-40776557 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 138, 47 |
| Conread position: | 525-733 |
| Cow position: | chr22:36832560-36832353 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 83, 16 |
| Conread position: | 525-876 |
| Cow position: | chr22:34016366-34016729 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 97, 25 |
| Conread position: | 529-876 |
| Cow position: | chr22:27566810-27567169 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 78, 43 |
| Conread position: | 529-892 |
| Cow position: | chr22:42019035-42018657 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 89, 43 |
| Conread position: | 530-876 |
| Cow position: | chr22:7237833-7238192 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 35, 13 |
| Conread position: | 530-876 |
| Cow position: | chr22:29513807-29514159 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 19 |
| Conread position: | 554-749 |
| Cow position: | chr22:33700472-33700264 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 70 |
| Conread position: | 557-877 |
| Cow position: | chr22:10720632-10720966 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 32, 131 |
| Conread position: | 559-792 |
| Cow position: | chr22:30065060-30065302 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 560-866 |
| Cow position: | chr22:39962409-39962718 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 560-876 |
| Cow position: | chr22:17656134-17656456 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 13 |
| Conread position: | 560-876 |
| Cow position: | chr22:22765802-22765473 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 7 |
| Conread position: | 562-876 |
| Cow position: | chr22:7361670-7361345 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 564-876 |
| Cow position: | chr22:47529196-47528893 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 142, 8 |
| Conread position: | 567-889 |
| Cow position: | chr22:32912701-32912371 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 568-843 |
| Cow position: | chr22:32293793-32293499 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 571-859 |
| Cow position: | chr22:37185532-37185820 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 111 |
| Conread position: | 571-893 |
| Cow position: | chr22:31557038-31557372 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 571-899 |
| Cow position: | chr22:11252637-11252292 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 572-876 |
| Cow position: | chr22:40358707-40358399 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 88 |
| Conread position: | 573-831 |
| Cow position: | chr22:29845916-29845646 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 576-876 |
| Cow position: | chr22:5033974-5033664 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 583-837 |
| Cow position: | chr22:32305046-32304777 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 583-846 |
| Cow position: | chr22:8686108-8685834 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 82 |
| Conread position: | 583-862 |
| Cow position: | chr22:8696541-8696248 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 25, 129 |
| Conread position: | 610-873 |
| Cow position: | chr22:25701525-25701811 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 629-876 |
| Cow position: | chr22:25449686-25449946 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 34, 87 |
Show alignments to all cow chromosomes.