Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8036I19.3 |
| Conread position: | 491-685 |
| Cow position: | chr23:16655242-16655049 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 15, 32 |
| Conread position: | 491-876 |
| Cow position: | chr23:17237145-17236756 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 31 |
| Conread position: | 501-834 |
| Cow position: | chr23:11047367-11047028 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 503-801 |
| Cow position: | chr23:9610609-9610312 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 108, 43 |
| Conread position: | 503-801 |
| Cow position: | chr23:15895127-15895432 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 160, 77 |
| Conread position: | 503-853 |
| Cow position: | chr23:15028382-15028738 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 142, 19 |
| Conread position: | 503-860 |
| Cow position: | chr23:15884609-15884970 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 157, 11 |
| Conread position: | 503-876 |
| Cow position: | chr23:26581801-26582169 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 254 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 145, 68 |
| Conread position: | 503-893 |
| Cow position: | chr23:20984231-20983855 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 268 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 155, 19 |
| Conread position: | 504-852 |
| Cow position: | chr23:10956726-10956367 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 504-876 |
| Cow position: | chr23:10226037-10226409 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 508-840 |
| Cow position: | chr23:11365731-11366071 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 99, 14 |
| Conread position: | 508-853 |
| Cow position: | chr23:2430589-2430947 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 508-876 |
| Cow position: | chr23:7904643-7904262 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 48 |
| Conread position: | 509-860 |
| Cow position: | chr23:13504654-13505020 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 60 |
| Conread position: | 509-874 |
| Cow position: | chr23:31615585-31615205 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 99, 13 |
| Conread position: | 511-801 |
| Cow position: | chr23:35072136-35071840 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 97, 11 |
| Conread position: | 514-846 |
| Cow position: | chr23:11010990-11011334 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 92, 7 |
| Conread position: | 515-874 |
| Cow position: | chr23:14430375-14430734 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 92, 7 |
| Conread position: | 517-833 |
| Cow position: | chr23:10914551-10914226 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 47, 5 |
| Conread position: | 521-874 |
| Cow position: | chr23:26419696-26419326 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 79, 51 |
| Conread position: | 522-890 |
| Cow position: | chr23:7128863-7129234 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 95, 20 |
| Conread position: | 522-890 |
| Cow position: | chr23:11083559-11083930 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 259 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 28, 52 |
| Conread position: | 525-685 |
| Cow position: | chr23:13028498-13028340 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 526-727 |
| Cow position: | chr23:15953886-15954091 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 81, 45 |
| Conread position: | 556-876 |
| Cow position: | chr23:11400183-11399852 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 16 |
| Conread position: | 557-876 |
| Cow position: | chr23:24980885-24980544 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 9, 17 |
| Conread position: | 558-864 |
| Cow position: | chr23:25085981-25086301 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 100, 14 |
| Conread position: | 560-876 |
| Cow position: | chr23:18879513-18879188 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 58, 12 |
| Conread position: | 561-876 |
| Cow position: | chr23:15960849-15961176 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 570-843 |
| Cow position: | chr23:36974035-36973746 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 572-828 |
| Cow position: | chr23:7218196-7218467 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 18 |
| Conread position: | 572-874 |
| Cow position: | chr23:16941329-16941646 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 234 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 35, 23 |
| Conread position: | 572-876 |
| Cow position: | chr23:22551869-22551564 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 76 |
| Conread position: | 580-856 |
| Cow position: | chr23:22264302-22264014 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 83, 31 |
| Conread position: | 580-876 |
| Cow position: | chr23:29953980-29953666 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 583-876 |
| Cow position: | chr23:9287138-9286855 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 119 |
| Conread position: | 616-882 |
| Cow position: | chr23:7265202-7265477 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 14, 200 |
| Conread position: | 618-862 |
| Cow position: | chr23:1186975-1187229 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 621-875 |
| Cow position: | chr23:9072759-9073024 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 216 |
| Conread position: | 631-865 |
| Cow position: | chr23:16707255-16707012 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 111 |
| Conread position: | 636-876 |
| Cow position: | chr23:281758-281511 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 27, 88 |
| Conread position: | 685-876 |
| Cow position: | chr23:25773209-25773012 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
Show alignments to all cow chromosomes.