Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8036I19.3 |
| Conread position: | 489-876 |
| Cow position: | chr24:16564736-16564358 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 490-874 |
| Cow position: | chr24:23139890-23140265 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 498-890 |
| Cow position: | chr24:38264406-38263998 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 279 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 34, 75 |
| Conread position: | 503-877 |
| Cow position: | chr24:8327304-8326906 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 6, 17 |
| Conread position: | 503-877 |
| Cow position: | chr24:16631935-16631545 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 272 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 108, 19 |
| Conread position: | 503-893 |
| Cow position: | chr24:37514044-37514447 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 265 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 120, 19 |
| Conread position: | 504-874 |
| Cow position: | chr24:20326912-20326554 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 508-863 |
| Cow position: | chr24:37433798-37434165 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 14 |
| Conread position: | 508-875 |
| Cow position: | chr24:33517893-33518264 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 257 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 56, 6 |
| Conread position: | 509-743 |
| Cow position: | chr24:25213658-25213422 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 512-876 |
| Cow position: | chr24:20289099-20289467 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 161, 10 |
| Conread position: | 513-890 |
| Cow position: | chr24:38836192-38835824 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 94, 9 |
| Conread position: | 516-900 |
| Cow position: | chr24:25100227-25100623 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 83, 6 |
| Conread position: | 521-875 |
| Cow position: | chr24:24799079-24799440 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 97, 56 |
| Conread position: | 522-852 |
| Cow position: | chr24:6193159-6192821 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 84, 50 |
| Conread position: | 524-876 |
| Cow position: | chr24:27891672-27892030 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 83, 30 |
| Conread position: | 526-827 |
| Cow position: | chr24:36473430-36473749 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 81, 46 |
| Conread position: | 526-876 |
| Cow position: | chr24:5767674-5768021 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 66, 46 |
| Conread position: | 526-890 |
| Cow position: | chr24:3419304-3419654 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 81, 33 |
| Conread position: | 527-838 |
| Cow position: | chr24:249220-248903 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 43, 65 |
| Conread position: | 528-876 |
| Cow position: | chr24:33010042-33010393 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 135, 44 |
| Conread position: | 547-876 |
| Cow position: | chr24:24626282-24626620 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 554-860 |
| Cow position: | chr24:42136318-42136017 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 554-876 |
| Cow position: | chr24:44541368-44541033 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 559-830 |
| Cow position: | chr24:43357326-43357044 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 51 |
| Conread position: | 572-821 |
| Cow position: | chr24:1499165-1498908 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 54, 118 |
| Conread position: | 574-890 |
| Cow position: | chr24:19074429-19074110 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 226 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 620-865 |
| Cow position: | chr24:37532721-37532466 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 624-860 |
| Cow position: | chr24:24898591-24898345 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 59, 90 |
| Conread position: | 631-875 |
| Cow position: | chr24:23988525-23988275 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 716-890 |
| Cow position: | chr24:42676235-42676058 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 719-875 |
| Cow position: | chr24:25489168-25489323 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 62 |
| Conread position: | 719-876 |
| Cow position: | chr24:36863003-36862841 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 719-876 |
| Cow position: | chr24:37715818-37715979 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 136 |
| Conread position: | 722-868 |
| Cow position: | chr24:19907564-19907415 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.