Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8036I19.3 |
| Conread position: | 429-877 |
| Cow position: | chr26:19859729-19859261 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 500-860 |
| Cow position: | chr26:16612696-16612314 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 265 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 12, 24 |
| Conread position: | 500-876 |
| Cow position: | chr26:8609322-8609687 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 107, 22 |
| Conread position: | 500-890 |
| Cow position: | chr26:10598963-10599370 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 279 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 502-691 |
| Cow position: | chr26:34748182-34748377 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 72 |
| Conread position: | 502-875 |
| Cow position: | chr26:19133008-19132623 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 48, 11 |
| Conread position: | 502-876 |
| Cow position: | chr26:8547793-8548174 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 265 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 502-876 |
| Cow position: | chr26:19862190-19861804 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 29 |
| Conread position: | 503-860 |
| Cow position: | chr26:5400404-5400767 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 68 |
| Conread position: | 504-876 |
| Cow position: | chr26:11789019-11788644 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 70 |
| Conread position: | 505-853 |
| Cow position: | chr26:231045-231398 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 103, 17 |
| Conread position: | 505-876 |
| Cow position: | chr26:12993624-12993253 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 106, 11 |
| Conread position: | 505-876 |
| Cow position: | chr26:21659841-21659464 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 506-894 |
| Cow position: | chr26:18375878-18375481 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 262 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 94, 16 |
| Conread position: | 507-851 |
| Cow position: | chr26:25478214-25477854 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 147, 12 |
| Conread position: | 507-863 |
| Cow position: | chr26:27833177-27832802 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 19, 66 |
| Conread position: | 508-777 |
| Cow position: | chr26:24244204-24243944 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 128, 14 |
| Conread position: | 509-792 |
| Cow position: | chr26:24276299-24276581 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 102, 13 |
| Conread position: | 509-830 |
| Cow position: | chr26:26627771-26628116 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 95, 12 |
| Conread position: | 510-796 |
| Cow position: | chr26:19871640-19871928 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 97, 12 |
| Conread position: | 514-871 |
| Cow position: | chr26:24376146-24376512 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 100, 8 |
| Conread position: | 514-893 |
| Cow position: | chr26:9493609-9494007 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 138, 8 |
| Conread position: | 516-802 |
| Cow position: | chr26:11804691-11804967 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 92, 6 |
| Conread position: | 522-850 |
| Cow position: | chr26:21217605-21217267 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 54 |
| Conread position: | 522-890 |
| Cow position: | chr26:11959520-11959895 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 265 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 28, 33 |
| Conread position: | 524-845 |
| Cow position: | chr26:22120147-22120459 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 31 |
| Conread position: | 524-876 |
| Cow position: | chr26:21638465-21638823 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 48 |
| Conread position: | 524-882 |
| Cow position: | chr26:11629885-11629515 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 248 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 82, 10 |
| Conread position: | 525-877 |
| Cow position: | chr26:5190729-5191087 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 85, 172 |
| Conread position: | 526-827 |
| Cow position: | chr26:5538220-5538527 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 81, 24 |
| Conread position: | 526-828 |
| Cow position: | chr26:12541545-12541865 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 29, 23 |
| Conread position: | 527-814 |
| Cow position: | chr26:9473181-9473473 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 78, 35 |
| Conread position: | 528-801 |
| Cow position: | chr26:24384924-24385205 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 27, 22 |
| Conread position: | 528-871 |
| Cow position: | chr26:21691040-21691376 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 79, 45 |
| Conread position: | 530-876 |
| Cow position: | chr26:7521559-7521922 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 133, 42 |
| Conread position: | 531-890 |
| Cow position: | chr26:28539525-28539887 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 50 |
| Conread position: | 532-862 |
| Cow position: | chr26:25367625-25367282 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 131, 41 |
| Conread position: | 560-845 |
| Cow position: | chr26:25085892-25086193 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 51, 12 |
| Conread position: | 560-876 |
| Cow position: | chr26:11529104-11528786 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 12 |
| Conread position: | 561-877 |
| Cow position: | chr26:19909929-19910256 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 563-890 |
| Cow position: | chr26:22113070-22113387 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 9 |
| Conread position: | 564-878 |
| Cow position: | chr26:5542614-5542921 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 8 |
| Conread position: | 571-876 |
| Cow position: | chr26:19717193-19717511 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 36, 57 |
| Conread position: | 573-845 |
| Cow position: | chr26:27136937-27137220 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 64 |
| Conread position: | 573-876 |
| Cow position: | chr26:20946651-20946955 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 98, 89 |
| Conread position: | 573-880 |
| Cow position: | chr26:19082828-19082509 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 115 |
| Conread position: | 575-872 |
| Cow position: | chr26:25700655-25700957 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 36, 82 |
| Conread position: | 583-890 |
| Cow position: | chr26:14398919-14399246 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 610-873 |
| Cow position: | chr26:8171561-8171291 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 49, 128 |
| Conread position: | 625-899 |
| Cow position: | chr26:25334128-25333862 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 189, 32 |
| Conread position: | 668-877 |
| Cow position: | chr26:8265491-8265276 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 669-872 |
| Cow position: | chr26:17586619-17586825 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 22 |
Show alignments to all cow chromosomes.