Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8036I19.3
        

               Conread position:
               503-767
               

               Cow position:
               chr27:12187764-12187500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               111, 10
               

               Conread position:
               508-874
               

               Cow position:
               chr27:21793544-21793911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               114, 14
               

               Conread position:
               509-837
               

               Cow position:
               chr27:21279575-21279907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               235
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               42, 13
               

               Conread position:
               513-873
               

               Cow position:
               chr27:22245387-22245014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               263
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               95, 9
               

               Conread position:
               514-876
               

               Cow position:
               chr27:3496055-3495682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               141, 58
               

               Conread position:
               524-876
               

               Cow position:
               chr27:27056293-27056643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               83, 48
               

               Conread position:
               526-682
               

               Cow position:
               chr27:20960718-20960875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               63, 49
               

               Conread position:
               554-892
               

               Cow position:
               chr27:4077506-4077849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               16, 170
               

               Conread position:
               584-876
               

               Cow position:
               chr27:12160932-12160631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               22, 101
               

               Conread position:
               723-876
               

               Cow position:
               chr27:18527786-18527943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               91, 0
               
Show alignments to all cow chromosomes.