Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8036I19.3 |
| Conread position: | 496-682 |
| Cow position: | chr29:26134197-26134383 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 21, 27 |
| Conread position: | 502-874 |
| Cow position: | chr29:40136991-40137372 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 115, 20 |
| Conread position: | 503-791 |
| Cow position: | chr29:36340582-36340290 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 23, 71 |
| Conread position: | 503-804 |
| Cow position: | chr29:40703556-40703864 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 104, 19 |
| Conread position: | 503-813 |
| Cow position: | chr29:22318067-22317753 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 190, 19 |
| Conread position: | 503-870 |
| Cow position: | chr29:23120576-23120937 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 69, 19 |
| Conread position: | 503-874 |
| Cow position: | chr29:43070879-43071254 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 104, 19 |
| Conread position: | 506-667 |
| Cow position: | chr29:36707522-36707683 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 101, 16 |
| Conread position: | 506-876 |
| Cow position: | chr29:5177783-5178173 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 6, 17 |
| Conread position: | 508-661 |
| Cow position: | chr29:40800869-40800716 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 14 |
| Conread position: | 508-893 |
| Cow position: | chr29:39373039-39372629 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 73, 14 |
| Conread position: | 512-767 |
| Cow position: | chr29:21923273-21923537 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 10 |
| Conread position: | 522-815 |
| Cow position: | chr29:42366936-42367236 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 45, 51 |
| Conread position: | 522-876 |
| Cow position: | chr29:31345415-31345780 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 83, 50 |
| Conread position: | 522-899 |
| Cow position: | chr29:13046592-13046210 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 129, 53 |
| Conread position: | 525-874 |
| Cow position: | chr29:19616143-19616500 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 61, 30 |
| Conread position: | 525-882 |
| Cow position: | chr29:36727989-36727617 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 262 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 86, 47 |
| Conread position: | 525-899 |
| Cow position: | chr29:37069057-37068683 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 13, 32 |
| Conread position: | 526-876 |
| Cow position: | chr29:6466554-6466911 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 88, 28 |
| Conread position: | 534-890 |
| Cow position: | chr29:18979689-18980033 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 555-896 |
| Cow position: | chr29:22443458-22443121 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 47, 17 |
| Conread position: | 555-899 |
| Cow position: | chr29:5637044-5636680 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 17 |
| Conread position: | 557-870 |
| Cow position: | chr29:9315837-9316158 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 88, 16 |
| Conread position: | 560-859 |
| Cow position: | chr29:33128873-33128564 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 560-874 |
| Cow position: | chr29:12015748-12015423 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 12 |
| Conread position: | 560-876 |
| Cow position: | chr29:1005162-1004824 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 103, 242 |
| Conread position: | 560-876 |
| Cow position: | chr29:27687963-27687643 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 13 |
| Conread position: | 563-876 |
| Cow position: | chr29:5387847-5388176 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 563-876 |
| Cow position: | chr29:9510898-9511227 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 44, 110 |
| Conread position: | 581-876 |
| Cow position: | chr29:12967756-12968060 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 611-853 |
| Cow position: | chr29:18345662-18345423 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 106, 171 |
| Conread position: | 616-890 |
| Cow position: | chr29:26217171-26216890 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 47, 24 |
| Conread position: | 722-862 |
| Cow position: | chr29:9506875-9507015 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 126, 13 |
Show alignments to all cow chromosomes.