Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8036I19.3
        

               Conread position:
               152-416
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 224
               

               Conread position:
               490-876
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 6
               

               Conread position:
               495-876
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               127, 13
               

               Conread position:
               499-661
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               108, 23
               

               Conread position:
               499-893
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 23
               

               Conread position:
               499-896
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               108, 22
               

               Conread position:
               500-879
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               501-785
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               14, 78
               

               Conread position:
               503-678
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               503-783
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               157, 19
               

               Conread position:
               503-799
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               119, 19
               

               Conread position:
               503-809
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               23, 71
               

               Conread position:
               503-876
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               104, 9
               

               Conread position:
               503-876
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               503-890
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               283
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               108, 19
               

               Conread position:
               503-890
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               114, 69
               

               Conread position:
               504-647
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               18, 68
               

               Conread position:
               504-890
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               504-890
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               106, 18
               

               Conread position:
               505-724
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               91, 8
               

               Conread position:
               505-841
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               102, 17
               

               Conread position:
               505-845
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               102, 9
               

               Conread position:
               505-876
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               269
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               101, 16
               

               Conread position:
               505-876
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               112, 17
               

               Conread position:
               505-877
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               43, 23
               

               Conread position:
               507-876
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               268
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               99, 10
               

               Conread position:
               508-815
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               18, 67
               

               Conread position:
               508-839
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               47, 14
               

               Conread position:
               508-847
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               65, 19
               

               Conread position:
               508-850
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               112, 12
               

               Conread position:
               508-876
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               99, 14
               

               Conread position:
               509-686
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               98, 13
               

               Conread position:
               509-885
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               98, 13
               

               Conread position:
               510-871
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               97, 12
               

               Conread position:
               511-875
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               152, 11
               

               Conread position:
               512-874
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               43, 10
               

               Conread position:
               513-875
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 16
               

               Conread position:
               514-875
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 8
               

               Conread position:
               514-890
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               40, 7
               

               Conread position:
               515-815
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               92, 7
               

               Conread position:
               521-875
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               86, 26
               

               Conread position:
               522-815
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               141, 58
               

               Conread position:
               522-875
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 50
               

               Conread position:
               522-876
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               141, 14
               

               Conread position:
               522-876
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               242
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               68, 53
               

               Conread position:
               523-695
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               140, 9
               

               Conread position:
               523-863
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               252
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               524-853
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               189, 48
               

               Conread position:
               525-855
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               100, 48
               

               Conread position:
               525-876
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               75, 47
               

               Conread position:
               525-893
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               269
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               26, 52
               

               Conread position:
               530-835
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 49
               

               Conread position:
               530-876
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               530-876
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               16, 35
               

               Conread position:
               530-876
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               533-890
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               256
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               12, 23
               

               Conread position:
               534-868
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               155, 39
               

               Conread position:
               537-899
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               52, 17
               

               Conread position:
               547-876
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               60, 25
               

               Conread position:
               549-873
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               15, 143
               

               Conread position:
               549-890
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               555-815
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               55, 17
               

               Conread position:
               555-872
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               54, 17
               

               Conread position:
               555-872
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               52, 20
               

               Conread position:
               558-876
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               560-853
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               60, 10
               

               Conread position:
               560-876
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               44, 12
               

               Conread position:
               560-888
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               57, 13
               

               Conread position:
               561-876
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               562-876
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               233
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               101, 16
               

               Conread position:
               571-876
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               48, 40
               

               Conread position:
               573-876
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               35, 76
               

               Conread position:
               573-876
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               18, 295
               

               Conread position:
               576-899
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               25, 73
               

               Conread position:
               583-876
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               147, 109
               

               Conread position:
               625-890
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               85, 145
               

               Conread position:
               631-876
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               14, 159
               

               Conread position:
               635-875
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               28, 78
               

               Conread position:
               636-874
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 50
               

               Conread position:
               650-874
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               655-876
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 11
               

               Conread position:
               719-890
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               722-876
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               90, 8
               

               Conread position:
               733-887
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               81, 95
               

               Conread position:
               735-887
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               125, 47
               
Show alignments to all cow chromosomes.