Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8036I19.3 |
| Conread position: | 152-416 |
| Cow position: | chr3:11554888-11554623 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 224 |
| Conread position: | 490-876 |
| Cow position: | chr3:76157852-76157458 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 6 |
| Conread position: | 495-876 |
| Cow position: | chr3:59389666-59390065 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 127, 13 |
| Conread position: | 499-661 |
| Cow position: | chr3:61553133-61553295 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 108, 23 |
| Conread position: | 499-893 |
| Cow position: | chr3:39940715-39940332 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 23 |
| Conread position: | 499-896 |
| Cow position: | chr3:8044110-8044506 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 108, 22 |
| Conread position: | 500-879 |
| Cow position: | chr3:11553546-11553165 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 501-785 |
| Cow position: | chr3:8562846-8563142 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 14, 78 |
| Conread position: | 503-678 |
| Cow position: | chr3:17321980-17321803 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 503-783 |
| Cow position: | chr3:61119008-61118733 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 157, 19 |
| Conread position: | 503-799 |
| Cow position: | chr3:8051270-8050982 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 119, 19 |
| Conread position: | 503-809 |
| Cow position: | chr3:2295944-2295644 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 23, 71 |
| Conread position: | 503-876 |
| Cow position: | chr3:49912579-49912197 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 104, 9 |
| Conread position: | 503-876 |
| Cow position: | chr3:50731819-50731436 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 503-890 |
| Cow position: | chr3:44394169-44393773 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 283 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 108, 19 |
| Conread position: | 503-890 |
| Cow position: | chr3:53569061-53568669 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 114, 69 |
| Conread position: | 504-647 |
| Cow position: | chr3:11533415-11533269 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 504-890 |
| Cow position: | chr3:41854338-41854711 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 504-890 |
| Cow position: | chr3:76976880-76976480 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 106, 18 |
| Conread position: | 505-724 |
| Cow position: | chr3:41655844-41655627 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 91, 8 |
| Conread position: | 505-841 |
| Cow position: | chr3:4781814-4781463 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 102, 17 |
| Conread position: | 505-845 |
| Cow position: | chr3:27214406-27214066 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 102, 9 |
| Conread position: | 505-876 |
| Cow position: | chr3:10056438-10056062 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 269 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 101, 16 |
| Conread position: | 505-876 |
| Cow position: | chr3:22043643-22044024 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 112, 17 |
| Conread position: | 505-877 |
| Cow position: | chr3:61609508-61609889 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 43, 23 |
| Conread position: | 507-876 |
| Cow position: | chr3:56493394-56493768 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 268 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 99, 10 |
| Conread position: | 508-815 |
| Cow position: | chr3:41304529-41304211 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 508-839 |
| Cow position: | chr3:39132562-39132888 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 508-847 |
| Cow position: | chr3:39975607-39975262 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 19 |
| Conread position: | 508-850 |
| Cow position: | chr3:70519030-70519386 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 112, 12 |
| Conread position: | 508-876 |
| Cow position: | chr3:18596122-18595742 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 99, 14 |
| Conread position: | 509-686 |
| Cow position: | chr3:36085351-36085532 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 98, 13 |
| Conread position: | 509-885 |
| Cow position: | chr3:55387440-55387062 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 98, 13 |
| Conread position: | 510-871 |
| Cow position: | chr3:40896706-40896334 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 97, 12 |
| Conread position: | 511-875 |
| Cow position: | chr3:35882448-35882073 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 152, 11 |
| Conread position: | 512-874 |
| Cow position: | chr3:70094894-70095266 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 43, 10 |
| Conread position: | 513-875 |
| Cow position: | chr3:23229503-23229880 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 16 |
| Conread position: | 514-875 |
| Cow position: | chr3:80595338-80594970 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 8 |
| Conread position: | 514-890 |
| Cow position: | chr3:11652178-11651785 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 40, 7 |
| Conread position: | 515-815 |
| Cow position: | chr3:51458769-51458454 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 92, 7 |
| Conread position: | 521-875 |
| Cow position: | chr3:30192191-30192560 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 86, 26 |
| Conread position: | 522-815 |
| Cow position: | chr3:71260446-71260744 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 141, 58 |
| Conread position: | 522-875 |
| Cow position: | chr3:77746325-77745976 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 50 |
| Conread position: | 522-876 |
| Cow position: | chr3:17846673-17847027 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 141, 14 |
| Conread position: | 522-876 |
| Cow position: | chr3:22947405-22947773 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 68, 53 |
| Conread position: | 523-695 |
| Cow position: | chr3:15742790-15742958 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 140, 9 |
| Conread position: | 523-863 |
| Cow position: | chr3:63249069-63248725 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 252 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 69, 46 |
| Conread position: | 524-853 |
| Cow position: | chr3:69906506-69906828 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 189, 48 |
| Conread position: | 525-855 |
| Cow position: | chr3:12276062-12275732 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 100, 48 |
| Conread position: | 525-876 |
| Cow position: | chr3:40215568-40215200 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 75, 47 |
| Conread position: | 525-893 |
| Cow position: | chr3:63227707-63227324 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 269 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 530-835 |
| Cow position: | chr3:24906166-24905853 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 49 |
| Conread position: | 530-876 |
| Cow position: | chr3:9806564-9806227 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 35, 13 |
| Conread position: | 530-876 |
| Cow position: | chr3:64013318-64012944 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 530-876 |
| Cow position: | chr3:70839982-70839627 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 533-890 |
| Cow position: | chr3:18393921-18394287 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 256 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 12, 23 |
| Conread position: | 534-868 |
| Cow position: | chr3:14521516-14521185 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 155, 39 |
| Conread position: | 537-899 |
| Cow position: | chr3:42733850-42733480 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 52, 17 |
| Conread position: | 547-876 |
| Cow position: | chr3:20576214-20576532 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 549-873 |
| Cow position: | chr3:43649540-43649205 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 15, 143 |
| Conread position: | 549-890 |
| Cow position: | chr3:56202676-56203030 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 555-815 |
| Cow position: | chr3:199535-199271 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 55, 17 |
| Conread position: | 555-872 |
| Cow position: | chr3:60278367-60278692 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 555-872 |
| Cow position: | chr3:61836350-61836680 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 558-876 |
| Cow position: | chr3:44444703-44445041 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 560-853 |
| Cow position: | chr3:33330396-33330097 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 60, 10 |
| Conread position: | 560-876 |
| Cow position: | chr3:1257103-1256783 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 560-888 |
| Cow position: | chr3:70353361-70353699 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 57, 13 |
| Conread position: | 561-876 |
| Cow position: | chr3:70702043-70701722 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 562-876 |
| Cow position: | chr3:69495722-69496043 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 101, 16 |
| Conread position: | 571-876 |
| Cow position: | chr3:77613279-77613594 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 48, 40 |
| Conread position: | 573-876 |
| Cow position: | chr3:10679912-10679595 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 35, 76 |
| Conread position: | 573-876 |
| Cow position: | chr3:76266617-76266929 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 18, 295 |
| Conread position: | 576-899 |
| Cow position: | chr3:26746707-26747038 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 25, 73 |
| Conread position: | 583-876 |
| Cow position: | chr3:35260656-35260366 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 147, 109 |
| Conread position: | 625-890 |
| Cow position: | chr3:20453444-20453174 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 85, 145 |
| Conread position: | 631-876 |
| Cow position: | chr3:56575670-56575925 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 14, 159 |
| Conread position: | 635-875 |
| Cow position: | chr3:11660856-11660605 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 28, 78 |
| Conread position: | 636-874 |
| Cow position: | chr3:56376282-56376031 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 650-874 |
| Cow position: | chr3:72121851-72122089 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 655-876 |
| Cow position: | chr3:764532-764301 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 719-890 |
| Cow position: | chr3:43045941-43045770 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 722-876 |
| Cow position: | chr3:69056083-69055927 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 90, 8 |
| Conread position: | 733-887 |
| Cow position: | chr3:64084309-64084152 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 81, 95 |
| Conread position: | 735-887 |
| Cow position: | chr3:81561490-81561642 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 125, 47 |
Show alignments to all cow chromosomes.