Cow genome map
Conread name: | Ss1.1-Pig4-TMW8036I19.3 |
Conread position: | 478-876 |
Cow position: | chr5:60411240-60410846 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 271 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 128, 44 |
Conread position: | 494-876 |
Cow position: | chr5:5526424-5526811 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 276 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 166, 28 |
Conread position: | 500-845 |
Cow position: | chr5:51725193-51724850 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 234 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 14, 23 |
Conread position: | 501-680 |
Cow position: | chr5:5063408-5063229 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 136 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 14, 58 |
Conread position: | 502-876 |
Cow position: | chr5:3466797-3467184 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 268 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 16, 20 |
Conread position: | 503-788 |
Cow position: | chr5:21405235-21404940 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 192 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 160, 69 |
Conread position: | 503-874 |
Cow position: | chr5:75007927-75008292 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 246 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 11, 16 |
Conread position: | 503-876 |
Cow position: | chr5:27898961-27899337 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 19 |
Conread position: | 503-893 |
Cow position: | chr5:62205625-62205218 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 288 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 52, 44 |
Conread position: | 504-873 |
Cow position: | chr5:16959301-16959678 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 258 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 103, 18 |
Conread position: | 504-876 |
Cow position: | chr5:35339597-35339219 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 255 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 30, 18 |
Conread position: | 505-686 |
Cow position: | chr5:35577576-35577749 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 508-686 |
Cow position: | chr5:26224889-26225069 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 137 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 11, 33 |
Conread position: | 508-724 |
Cow position: | chr5:51541587-51541798 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 163 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 9, 15 |
Conread position: | 508-750 |
Cow position: | chr5:62544407-62544153 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 181 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 85, 14 |
Conread position: | 508-860 |
Cow position: | chr5:20383804-20383440 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 253 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 102, 14 |
Conread position: | 508-871 |
Cow position: | chr5:33176206-33175830 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 267 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 110, 14 |
Conread position: | 508-872 |
Cow position: | chr5:45601607-45601976 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 14 |
Conread position: | 508-876 |
Cow position: | chr5:41019393-41019778 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 268 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 118, 14 |
Conread position: | 508-889 |
Cow position: | chr5:55678501-55678115 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 269 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 42, 14 |
Conread position: | 508-890 |
Cow position: | chr5:8420431-8420800 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 254 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 99, 14 |
Conread position: | 508-890 |
Cow position: | chr5:39751125-39750731 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 255 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 18, 45 |
Conread position: | 512-890 |
Cow position: | chr5:27534208-27534600 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 270 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 95, 10 |
Conread position: | 514-788 |
Cow position: | chr5:69693837-69693571 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 195 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 93, 8 |
Conread position: | 517-890 |
Cow position: | chr5:53360119-53360487 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 262 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 91, 5 |
Conread position: | 522-724 |
Cow position: | chr5:34951316-34951110 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 146 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 137, 9 |
Conread position: | 524-890 |
Cow position: | chr5:21593289-21592935 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 244 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 207, 48 |
Conread position: | 525-821 |
Cow position: | chr5:54609260-54608953 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 206 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 82, 47 |
Conread position: | 525-860 |
Cow position: | chr5:19269129-19269466 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 236 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 121, 47 |
Conread position: | 525-873 |
Cow position: | chr5:70104540-70104195 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 228 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 133, 47 |
Conread position: | 525-876 |
Cow position: | chr5:69879661-69879291 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 241 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 27, 46 |
Conread position: | 525-877 |
Cow position: | chr5:64841318-64841671 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 239 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 16, 37 |
Conread position: | 526-828 |
Cow position: | chr5:44004060-44004370 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 203 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 95, 47 |
Conread position: | 530-876 |
Cow position: | chr5:61102389-61102023 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 246 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 42, 19 |
Conread position: | 531-876 |
Cow position: | chr5:50788792-50788444 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 248 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 14, 43 |
Conread position: | 540-890 |
Cow position: | chr5:31008685-31008334 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 239 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 116, 32 |
Conread position: | 555-815 |
Cow position: | chr5:41200978-41201244 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 195 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 62, 17 |
Conread position: | 555-873 |
Cow position: | chr5:60710396-60710731 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 218 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 48, 17 |
Conread position: | 555-876 |
Cow position: | chr5:46317307-46317633 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 217 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 108, 17 |
Conread position: | 557-876 |
Cow position: | chr5:20693121-20693441 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 209 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 49, 15 |
Conread position: | 558-889 |
Cow position: | chr5:66575394-66575046 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 245 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 53, 16 |
Conread position: | 560-769 |
Cow position: | chr5:17541359-17541145 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 147 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 47, 12 |
Conread position: | 560-828 |
Cow position: | chr5:58731501-58731767 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 188 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 12, 105 |
Conread position: | 560-875 |
Cow position: | chr5:24543322-24543647 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 220 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 50, 12 |
Conread position: | 560-876 |
Cow position: | chr5:27101384-27101056 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 218 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 103, 12 |
Conread position: | 560-876 |
Cow position: | chr5:74030057-74029724 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 227 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 47, 12 |
Conread position: | 560-899 |
Cow position: | chr5:22889995-22890348 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 244 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 51, 12 |
Conread position: | 562-890 |
Cow position: | chr5:18845337-18845003 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 249 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 44, 10 |
Conread position: | 563-876 |
Cow position: | chr5:25254821-25254505 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 209 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 44, 10 |
Conread position: | 573-876 |
Cow position: | chr5:51192750-51192435 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 225 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 575-876 |
Cow position: | chr5:70959416-70959723 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 207 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 36, 43 |
Conread position: | 581-887 |
Cow position: | chr5:64747373-64747683 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 208 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 36, 26 |
Conread position: | 583-875 |
Cow position: | chr5:32643729-32643438 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 204 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 22, 41 |
Conread position: | 610-876 |
Cow position: | chr5:62268637-62268358 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 197 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 12, 185 |
Conread position: | 610-877 |
Cow position: | chr5:62278802-62278526 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 181 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 621-859 |
Cow position: | chr5:54329361-54329124 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 165 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 42, 91 |
Conread position: | 631-876 |
Cow position: | chr5:4084049-4084304 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 176 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 32, 18 |
Conread position: | 631-883 |
Cow position: | chr5:69447948-69448209 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 176 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 729-890 |
Cow position: | chr5:35320077-35320238 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 119 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 119, 127 |
Conread position: | 744-876 |
Cow position: | chr5:56656726-56656862 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.