Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8036I19.3
        

               Conread position:
               484-764
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               95, 19
               

               Conread position:
               498-788
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               109, 10
               

               Conread position:
               499-815
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               123, 9
               

               Conread position:
               500-860
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 23
               

               Conread position:
               501-877
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               106, 52
               

               Conread position:
               503-784
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               23, 69
               

               Conread position:
               503-876
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               23, 70
               

               Conread position:
               503-890
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               11, 20
               

               Conread position:
               504-682
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               164, 18
               

               Conread position:
               504-899
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               273
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               107, 48
               

               Conread position:
               505-682
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               102, 9
               

               Conread position:
               505-860
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               13, 70
               

               Conread position:
               505-880
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               257
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               51, 23
               

               Conread position:
               507-882
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 38
               

               Conread position:
               507-889
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               276
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               19, 66
               

               Conread position:
               512-876
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               95, 15
               

               Conread position:
               513-893
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 9
               

               Conread position:
               514-876
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               92, 8
               

               Conread position:
               518-877
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               89, 55
               

               Conread position:
               519-876
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               94, 52
               

               Conread position:
               519-899
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               270
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               14, 55
               

               Conread position:
               521-860
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               105, 46
               

               Conread position:
               522-815
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               85, 50
               

               Conread position:
               522-816
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               88, 24
               

               Conread position:
               522-859
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               136, 50
               

               Conread position:
               522-876
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               244
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               28, 52
               

               Conread position:
               522-877
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               65, 17
               

               Conread position:
               525-796
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               92, 19
               

               Conread position:
               525-854
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               66, 35
               

               Conread position:
               525-876
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               82, 47
               

               Conread position:
               526-875
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               133, 47
               

               Conread position:
               526-876
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               138, 73
               

               Conread position:
               526-877
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               34, 24
               

               Conread position:
               528-890
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               38, 27
               

               Conread position:
               530-890
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               532-807
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               74, 40
               

               Conread position:
               534-876
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               77, 38
               

               Conread position:
               534-890
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               112, 39
               

               Conread position:
               535-877
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               72, 20
               

               Conread position:
               539-809
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               67, 33
               

               Conread position:
               546-850
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               5, 25
               

               Conread position:
               548-875
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               7, 26
               

               Conread position:
               552-893
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               68, 20
               

               Conread position:
               555-816
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 18
               

               Conread position:
               555-853
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               225
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               55, 17
               

               Conread position:
               555-876
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               56, 17
               

               Conread position:
               556-876
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               557-875
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               45, 85
               

               Conread position:
               558-876
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               558-876
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               560-809
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               47, 12
               

               Conread position:
               560-864
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               560-876
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               103, 12
               

               Conread position:
               560-890
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               47, 12
               

               Conread position:
               561-886
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 11
               

               Conread position:
               562-876
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               45, 10
               

               Conread position:
               564-853
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 8
               

               Conread position:
               570-883
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               91, 38
               

               Conread position:
               571-876
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               36, 70
               

               Conread position:
               576-899
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 119
               

               Conread position:
               582-863
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 25
               

               Conread position:
               601-879
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               212
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               57, 11
               

               Conread position:
               610-839
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               12, 169
               

               Conread position:
               611-885
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               11, 104
               

               Conread position:
               618-876
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               45, 73
               

               Conread position:
               618-877
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 75
               

               Conread position:
               621-875
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               42, 50
               

               Conread position:
               621-893
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               31, 142
               

               Conread position:
               631-876
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               22, 157
               

               Conread position:
               631-876
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               632-899
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               634-839
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               691-877
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 45
               

               Conread position:
               712-876
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               19, 35
               
Show alignments to all cow chromosomes.