Cow genome map

Conread name: Ss1.1-Pig4-TMW8036I19.3

Conread position: 484-764
Cow position: chr7:15629811-15630097 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 95, 19

Conread position: 498-788
Cow position: chr7:6544338-6544623 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 109, 10

Conread position: 499-815
Cow position: chr7:32371240-32370937 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 212
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 123, 9

Conread position: 500-860
Cow position: chr7:48104296-48103938 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 236
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 23

Conread position: 501-877
Cow position: chr7:34247072-34247459 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 254
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 106, 52

Conread position: 503-784
Cow position: chr7:36274607-36274311 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 23, 69

Conread position: 503-876
Cow position: chr7:59460349-59459957 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 253
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 70

Conread position: 503-890
Cow position: chr7:36242394-36242013 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 269
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 20

Conread position: 504-682
Cow position: chr7:59019658-59019483 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 164, 18

Conread position: 504-899
Cow position: chr7:34949019-34949427 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 273
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 107, 48

Conread position: 505-682
Cow position: chr7:15844088-15843912 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 102, 9

Conread position: 505-860
Cow position: chr7:21000969-21001330 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 252
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 13, 70

Conread position: 505-880
Cow position: chr7:29460324-29459969 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 257
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 51, 23

Conread position: 507-882
Cow position: chr7:43218469-43218852 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 246
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 38

Conread position: 507-889
Cow position: chr7:59093956-59093553 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 276
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 19, 66

Conread position: 512-876
Cow position: chr7:34519338-34519696 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 258
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 95, 15

Conread position: 513-893
Cow position: chr7:41984739-41984354 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 9

Conread position: 514-876
Cow position: chr7:17001300-17001661 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 244
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 92, 8

Conread position: 518-877
Cow position: chr7:9803505-9803865 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 255
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 89, 55

Conread position: 519-876
Cow position: chr7:66246528-66246891 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 248
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 94, 52

Conread position: 519-899
Cow position: chr7:31638936-31638538 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 270
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 14, 55

Conread position: 521-860
Cow position: chr7:3468375-3468714 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 224
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 105, 46

Conread position: 522-815
Cow position: chr7:11590950-11590651 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 85, 50

Conread position: 522-816
Cow position: chr7:54350397-54350690 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 88, 24

Conread position: 522-859
Cow position: chr7:12316431-12316772 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 234
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 136, 50

Conread position: 522-876
Cow position: chr7:59216814-59216450 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 244
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 28, 52

Conread position: 522-877
Cow position: chr7:1780588-1780948 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 234
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 65, 17

Conread position: 525-796
Cow position: chr7:35343173-35342907 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 92, 19

Conread position: 525-854
Cow position: chr7:30680304-30679959 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 236
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 66, 35

Conread position: 525-876
Cow position: chr7:51414244-51413887 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 253
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 82, 47

Conread position: 526-875
Cow position: chr7:52322097-52321736 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 133, 47

Conread position: 526-876
Cow position: chr7:44722962-44723317 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 138, 73

Conread position: 526-877
Cow position: chr7:65262346-65262706 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 232
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 24

Conread position: 528-890
Cow position: chr7:17330026-17329661 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 259
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 38, 27

Conread position: 530-890
Cow position: chr7:34666320-34665945 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 250
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 35, 19

Conread position: 532-807
Cow position: chr7:23997121-23996839 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 74, 40

Conread position: 534-876
Cow position: chr7:11162148-11162504 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 77, 38

Conread position: 534-890
Cow position: chr7:21712738-21713093 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 240
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 112, 39

Conread position: 535-877
Cow position: chr7:47834390-47834036 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 72, 20

Conread position: 539-809
Cow position: chr7:29137564-29137292 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 67, 33

Conread position: 546-850
Cow position: chr7:37183249-37182927 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 5, 25

Conread position: 548-875
Cow position: chr7:13846473-13846141 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 220
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 7, 26

Conread position: 552-893
Cow position: chr7:40615352-40615009 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 236
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 68, 20

Conread position: 555-816
Cow position: chr7:63998300-63998571 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 18

Conread position: 555-853
Cow position: chr7:31297322-31297002 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 55, 17

Conread position: 555-876
Cow position: chr7:7890016-7890351 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 216
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 56, 17

Conread position: 556-876
Cow position: chr7:13456618-13456943 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 51, 16

Conread position: 557-875
Cow position: chr7:7078173-7078491 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 45, 85

Conread position: 558-876
Cow position: chr7:60177840-60178157 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 49, 15

Conread position: 558-876
Cow position: chr7:60188193-60187876 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 49, 15

Conread position: 560-809
Cow position: chr7:17010652-17010911 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 47, 12

Conread position: 560-864
Cow position: chr7:37674765-37675077 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 13

Conread position: 560-876
Cow position: chr7:34892617-34892935 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 222
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 103, 12

Conread position: 560-890
Cow position: chr7:42247238-42246918 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 12

Conread position: 561-886
Cow position: chr7:22654989-22655322 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 11

Conread position: 562-876
Cow position: chr7:8552286-8551968 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 10

Conread position: 564-853
Cow position: chr7:44478979-44479283 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 8

Conread position: 570-883
Cow position: chr7:10005942-10006263 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 91, 38

Conread position: 571-876
Cow position: chr7:11729984-11729664 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 36, 70

Conread position: 576-899
Cow position: chr7:3163567-3163903 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 215
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 119

Conread position: 582-863
Cow position: chr7:15342031-15341742 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 196
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 25

Conread position: 601-879
Cow position: chr7:22012793-22013078 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 57, 11

Conread position: 610-839
Cow position: chr7:36848020-36848260 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 169

Conread position: 611-885
Cow position: chr7:37158875-37159155 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 104

Conread position: 618-876
Cow position: chr7:5487503-5487771 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 73

Conread position: 618-877
Cow position: chr7:53056164-53056417 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 75

Conread position: 621-875
Cow position: chr7:59520622-59520372 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 50

Conread position: 621-893
Cow position: chr7:29404614-29404897 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 142

Conread position: 631-876
Cow position: chr7:1815021-1815276 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 22, 157

Conread position: 631-876
Cow position: chr7:38904899-38904643 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 632-899
Cow position: chr7:22180266-22180548 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 634-839
Cow position: chr7:54065070-54064853 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 691-877
Cow position: chr7:9529482-9529296 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 45

Conread position: 712-876
Cow position: chr7:19402415-19402582 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 35

Show alignments to all cow chromosomes.