Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8036I19.3
        

               Conread position:
               422-818
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 28
               

               Conread position:
               499-876
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               256
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               142, 23
               

               Conread position:
               500-681
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               27, 74
               

               Conread position:
               501-804
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               112, 7
               

               Conread position:
               502-859
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               161, 20
               

               Conread position:
               502-860
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 76
               

               Conread position:
               502-882
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               105, 11
               

               Conread position:
               503-771
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               138, 24
               

               Conread position:
               503-874
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               503-876
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               108, 26
               

               Conread position:
               504-815
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               38, 18
               

               Conread position:
               504-860
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               103, 27
               

               Conread position:
               504-876
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               107, 18
               

               Conread position:
               504-890
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               108, 9
               

               Conread position:
               505-860
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               252
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               506-850
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               246
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               20, 72
               

               Conread position:
               506-872
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               264
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               79, 8
               

               Conread position:
               508-834
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               37, 20
               

               Conread position:
               508-890
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               18, 66
               

               Conread position:
               510-810
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               97, 61
               

               Conread position:
               510-868
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               263
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               97, 9
               

               Conread position:
               510-871
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               44, 29
               

               Conread position:
               512-796
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               145, 10
               

               Conread position:
               512-800
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               221
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               93, 15
               

               Conread position:
               512-844
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               95, 10
               

               Conread position:
               512-877
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               102, 10
               

               Conread position:
               513-860
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               86, 8
               

               Conread position:
               515-848
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               155, 7
               

               Conread position:
               515-886
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               522-669
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               85, 49
               

               Conread position:
               522-828
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               89, 23
               

               Conread position:
               522-890
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               89, 32
               

               Conread position:
               525-801
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               82, 48
               

               Conread position:
               525-861
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               239
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               30, 25
               

               Conread position:
               525-876
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               253
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               82, 47
               

               Conread position:
               525-892
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               97, 35
               

               Conread position:
               528-862
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               528-890
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               258
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               79, 22
               

               Conread position:
               536-873
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               13, 259
               

               Conread position:
               547-875
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               60, 25
               

               Conread position:
               554-850
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 19
               

               Conread position:
               555-857
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               555-875
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               556-840
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               556-876
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               108, 16
               

               Conread position:
               557-890
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               86, 15
               

               Conread position:
               559-899
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               24, 13
               

               Conread position:
               560-816
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               64, 10
               

               Conread position:
               560-876
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               34, 17
               

               Conread position:
               567-890
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               234
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               10, 57
               

               Conread position:
               571-875
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               37, 67
               

               Conread position:
               571-882
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               27, 204
               

               Conread position:
               573-876
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               33, 252
               

               Conread position:
               575-890
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 260
               

               Conread position:
               583-891
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               28, 77
               

               Conread position:
               584-890
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 26
               

               Conread position:
               586-893
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               10, 208
               

               Conread position:
               592-900
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 19
               

               Conread position:
               610-858
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 177
               

               Conread position:
               610-876
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 101
               

               Conread position:
               611-873
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               55, 49
               

               Conread position:
               624-876
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               39, 96
               

               Conread position:
               625-877
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               66, 42
               

               Conread position:
               632-877
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               31, 61
               

               Conread position:
               719-876
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 153
               
Show alignments to all cow chromosomes.