Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8036I19.3 |
| Conread position: | 422-818 |
| Cow position: | chr8:19906992-19907386 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 499-876 |
| Cow position: | chr8:47587636-47587989 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 256 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 142, 23 |
| Conread position: | 500-681 |
| Cow position: | chr8:49555426-49555609 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 501-804 |
| Cow position: | chr8:33031956-33031655 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 112, 7 |
| Conread position: | 502-859 |
| Cow position: | chr8:25495567-25495927 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 161, 20 |
| Conread position: | 502-860 |
| Cow position: | chr8:44445811-44445437 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 76 |
| Conread position: | 502-882 |
| Cow position: | chr8:53872264-53872650 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 105, 11 |
| Conread position: | 503-771 |
| Cow position: | chr8:44333065-44332794 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 138, 24 |
| Conread position: | 503-874 |
| Cow position: | chr8:12082466-12082849 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 503-876 |
| Cow position: | chr8:52644380-52643994 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 108, 26 |
| Conread position: | 504-815 |
| Cow position: | chr8:14711643-14711958 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 504-860 |
| Cow position: | chr8:57630488-57630125 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 103, 27 |
| Conread position: | 504-876 |
| Cow position: | chr8:49048202-49047822 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 107, 18 |
| Conread position: | 504-890 |
| Cow position: | chr8:8479617-8480008 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 108, 9 |
| Conread position: | 505-860 |
| Cow position: | chr8:44446179-44445817 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 72, 16 |
| Conread position: | 506-850 |
| Cow position: | chr8:21821375-21821730 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 20, 72 |
| Conread position: | 506-872 |
| Cow position: | chr8:18458587-18458207 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 264 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 79, 8 |
| Conread position: | 508-834 |
| Cow position: | chr8:21120953-21121290 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 37, 20 |
| Conread position: | 508-890 |
| Cow position: | chr8:13824524-13824911 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 18, 66 |
| Conread position: | 510-810 |
| Cow position: | chr8:35865296-35865597 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 97, 61 |
| Conread position: | 510-868 |
| Cow position: | chr8:35192842-35192477 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 263 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 97, 9 |
| Conread position: | 510-871 |
| Cow position: | chr8:25367866-25368236 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 44, 29 |
| Conread position: | 512-796 |
| Cow position: | chr8:41300224-41299933 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 145, 10 |
| Conread position: | 512-800 |
| Cow position: | chr8:29690020-29689718 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 93, 15 |
| Conread position: | 512-844 |
| Cow position: | chr8:47970933-47970587 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 95, 10 |
| Conread position: | 512-877 |
| Cow position: | chr8:30401849-30402228 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 102, 10 |
| Conread position: | 513-860 |
| Cow position: | chr8:32165026-32164670 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 86, 8 |
| Conread position: | 515-848 |
| Cow position: | chr8:46050807-46050492 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 155, 7 |
| Conread position: | 515-886 |
| Cow position: | chr8:13213935-13214324 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 14, 58 |
| Conread position: | 522-669 |
| Cow position: | chr8:41123951-41124101 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 85, 49 |
| Conread position: | 522-828 |
| Cow position: | chr8:32796383-32796688 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 89, 23 |
| Conread position: | 522-890 |
| Cow position: | chr8:43136067-43135704 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 89, 32 |
| Conread position: | 525-801 |
| Cow position: | chr8:46979597-46979881 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 48 |
| Conread position: | 525-861 |
| Cow position: | chr8:43239432-43239084 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 30, 25 |
| Conread position: | 525-876 |
| Cow position: | chr8:29887432-29887774 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 253 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 82, 47 |
| Conread position: | 525-892 |
| Cow position: | chr8:22062671-22062306 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 97, 35 |
| Conread position: | 528-862 |
| Cow position: | chr8:18630311-18630645 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 14, 63 |
| Conread position: | 528-890 |
| Cow position: | chr8:37846743-37846378 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 258 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 79, 22 |
| Conread position: | 536-873 |
| Cow position: | chr8:37269284-37268925 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 13, 259 |
| Conread position: | 547-875 |
| Cow position: | chr8:6036882-6037217 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 554-850 |
| Cow position: | chr8:31836247-31835955 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 19 |
| Conread position: | 555-857 |
| Cow position: | chr8:17893295-17892989 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 17 |
| Conread position: | 555-875 |
| Cow position: | chr8:4937800-4938131 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 556-840 |
| Cow position: | chr8:41042889-41043180 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 556-876 |
| Cow position: | chr8:57046624-57046299 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 108, 16 |
| Conread position: | 557-890 |
| Cow position: | chr8:46807067-46807413 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 86, 15 |
| Conread position: | 559-899 |
| Cow position: | chr8:13971479-13971140 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 24, 13 |
| Conread position: | 560-816 |
| Cow position: | chr8:28667588-28667320 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 10 |
| Conread position: | 560-876 |
| Cow position: | chr8:43729119-43729443 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 567-890 |
| Cow position: | chr8:11654420-11654088 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 10, 57 |
| Conread position: | 571-875 |
| Cow position: | chr8:28293152-28293464 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 37, 67 |
| Conread position: | 571-882 |
| Cow position: | chr8:47213199-47213525 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 27, 204 |
| Conread position: | 573-876 |
| Cow position: | chr8:28335499-28335818 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 33, 252 |
| Conread position: | 575-890 |
| Cow position: | chr8:11667196-11667523 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 260 |
| Conread position: | 583-891 |
| Cow position: | chr8:32127443-32127754 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 77 |
| Conread position: | 584-890 |
| Cow position: | chr8:49674902-49674596 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 586-893 |
| Cow position: | chr8:31261410-31261095 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 10, 208 |
| Conread position: | 592-900 |
| Cow position: | chr8:38864996-38864683 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 19 |
| Conread position: | 610-858 |
| Cow position: | chr8:45568036-45568298 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 177 |
| Conread position: | 610-876 |
| Cow position: | chr8:52213645-52213922 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 101 |
| Conread position: | 611-873 |
| Cow position: | chr8:53989151-53989428 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 55, 49 |
| Conread position: | 624-876 |
| Cow position: | chr8:95596-95334 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 39, 96 |
| Conread position: | 625-877 |
| Cow position: | chr8:54530519-54530783 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 42 |
| Conread position: | 632-877 |
| Cow position: | chr8:53875454-53875703 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 31, 61 |
| Conread position: | 719-876 |
| Cow position: | chr8:52786295-52786133 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 153 |
Show alignments to all cow chromosomes.