Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8036I19.3
        

               Conread position:
               422-890
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               317
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               499-860
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               18, 24
               

               Conread position:
               499-890
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               48, 236
               

               Conread position:
               500-867
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               10, 30
               

               Conread position:
               501-879
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 21
               

               Conread position:
               502-890
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 54
               

               Conread position:
               503-674
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 70
               

               Conread position:
               503-768
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               42, 19
               

               Conread position:
               503-788
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               108, 19
               

               Conread position:
               503-846
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 19
               

               Conread position:
               503-874
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               269
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               61, 19
               

               Conread position:
               503-876
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               503-876
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 20
               

               Conread position:
               503-879
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               254
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               106, 19
               

               Conread position:
               503-890
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 47
               

               Conread position:
               504-815
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               118, 18
               

               Conread position:
               504-815
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               87, 9
               

               Conread position:
               504-816
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               100, 23
               

               Conread position:
               504-889
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               272
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               105, 14
               

               Conread position:
               504-890
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               271
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               102, 9
               

               Conread position:
               505-693
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               505-837
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 17
               

               Conread position:
               505-862
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               117, 17
               

               Conread position:
               505-875
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               505-876
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               508-647
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               99, 14
               

               Conread position:
               508-678
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               40, 12
               

               Conread position:
               508-858
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               509-815
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               98, 18
               

               Conread position:
               510-860
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 17
               

               Conread position:
               512-699
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               96, 10
               

               Conread position:
               512-831
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               95, 10
               

               Conread position:
               512-876
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               12, 64
               

               Conread position:
               512-876
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               250
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               151, 15
               

               Conread position:
               513-794
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               111, 14
               

               Conread position:
               513-885
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               262
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               109, 9
               

               Conread position:
               514-851
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               88, 8
               

               Conread position:
               514-876
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               265
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               72, 8
               

               Conread position:
               515-874
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               263
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               38, 7
               

               Conread position:
               515-893
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               92, 7
               

               Conread position:
               516-876
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               103, 11
               

               Conread position:
               517-860
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               72, 54
               

               Conread position:
               519-874
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               252
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               7, 54
               

               Conread position:
               519-874
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               252
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               7, 55
               

               Conread position:
               520-893
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               263
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               6, 25
               

               Conread position:
               522-725
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               142, 14
               

               Conread position:
               522-774
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               85, 50
               

               Conread position:
               522-815
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               85, 21
               

               Conread position:
               522-820
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               89, 38
               

               Conread position:
               522-837
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               22, 31
               

               Conread position:
               522-875
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               61, 21
               

               Conread position:
               522-890
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               259
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               67, 55
               

               Conread position:
               524-892
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               255
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               525-776
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               525-874
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               84, 48
               

               Conread position:
               525-876
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               258
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               82, 35
               

               Conread position:
               525-876
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               245
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               80, 20
               

               Conread position:
               525-884
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 11
               

               Conread position:
               527-786
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 45
               

               Conread position:
               530-877
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               92, 29
               

               Conread position:
               533-815
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               56, 38
               

               Conread position:
               534-860
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               31, 16
               

               Conread position:
               534-880
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               15, 21
               

               Conread position:
               540-850
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               11, 31
               

               Conread position:
               547-821
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               67, 25
               

               Conread position:
               548-876
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               82, 24
               

               Conread position:
               549-890
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               247
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               58, 5
               

               Conread position:
               554-853
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               554-890
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 18
               

               Conread position:
               555-850
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               52, 17
               

               Conread position:
               555-874
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               555-876
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               43, 18
               

               Conread position:
               557-824
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               557-834
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 11
               

               Conread position:
               557-874
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               54, 16
               

               Conread position:
               560-833
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               47, 12
               

               Conread position:
               560-850
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 30
               

               Conread position:
               560-875
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               47, 12
               

               Conread position:
               560-888
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 12
               

               Conread position:
               560-893
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               57, 46
               

               Conread position:
               560-893
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               251
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               24, 13
               

               Conread position:
               561-831
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               563-890
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               141, 9
               

               Conread position:
               571-859
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               39, 8
               

               Conread position:
               571-893
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               65, 38
               

               Conread position:
               575-876
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               32, 73
               

               Conread position:
               577-876
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 47
               

               Conread position:
               578-876
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               578-876
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               29, 109
               

               Conread position:
               583-876
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               24, 267
               

               Conread position:
               583-890
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               24, 70
               

               Conread position:
               584-875
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 69
               

               Conread position:
               587-890
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               75, 24
               

               Conread position:
               594-860
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               35, 46
               

               Conread position:
               618-877
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               72, 95
               

               Conread position:
               631-877
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               632-876
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               31, 207
               

               Conread position:
               662-876
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 52
               

               Conread position:
               719-899
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               720-875
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               142, 10
               
Show alignments to all cow chromosomes.