Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8036I23.3 |
| Conread position: | 1-228 |
| Cow position: | chr13:56334094-56334321 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-497 |
| Cow position: | chr13:39984017-39984517 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 455, 0 |
| Conread position: | 1-510 |
| Cow position: | chr13:39984185-39984699 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 456, 0 |
| Conread position: | 3-451 |
| Cow position: | chr13:56317382-56317822 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 181, 90 |
| Conread position: | 15-207 |
| Cow position: | chr13:56291983-56291790 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 75, 85 |
| Conread position: | 15-312 |
| Cow position: | chr13:22125396-22125693 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 15-457 |
| Cow position: | chr13:22124976-22125418 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 11 |
| Conread position: | 19-493 |
| Cow position: | chr13:56292304-56291837 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 75 |
| Conread position: | 20-503 |
| Cow position: | chr13:39983868-39984356 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 302 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 436, 0 |
| Conread position: | 24-396 |
| Cow position: | chr13:56333940-56334321 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 24-497 |
| Cow position: | chr13:56333520-56333996 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 431, 0 |
| Conread position: | 27-295 |
| Cow position: | chr13:39984631-39984899 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 164, 156 |
| Conread position: | 27-337 |
| Cow position: | chr13:39984547-39984857 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-453 |
| Cow position: | chr13:56333859-56334294 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 182, 351 |
| Conread position: | 27-485 |
| Cow position: | chr13:56292884-56292433 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 281 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 67, 30 |
| Conread position: | 29-414 |
| Cow position: | chr13:39930793-39931176 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 65, 71 |
| Conread position: | 29-426 |
| Cow position: | chr13:39930709-39931106 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 270 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 53, 71 |
| Conread position: | 29-426 |
| Cow position: | chr13:39984129-39984526 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-426 |
| Cow position: | chr13:39984465-39984862 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 324 |
| Conread position: | 29-507 |
| Cow position: | chr13:39984297-39984780 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 428, 0 |
| Conread position: | 29-518 |
| Cow position: | chr13:56333693-56334196 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 230 |
| Conread position: | 33-428 |
| Cow position: | chr13:39930629-39931024 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 266 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 41-503 |
| Cow position: | chr13:39983973-39984440 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 415, 0 |
| Conread position: | 41-512 |
| Cow position: | chr13:39983721-39984197 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 416, 0 |
| Conread position: | 42-416 |
| Cow position: | chr13:24162811-24163187 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 6, 74 |
| Conread position: | 52-426 |
| Cow position: | chr13:39983816-39984190 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 42, 49 |
| Conread position: | 61-493 |
| Cow position: | chr13:56292436-56292006 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 287 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 33, 39 |
| Conread position: | 115-428 |
| Cow position: | chr13:39930627-39930940 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 48, 56 |
| Conread position: | 197-426 |
| Cow position: | chr13:56317929-56318158 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 152, 134 |
Show alignments to all cow chromosomes.