Cow genome map

Conread name: Ss1.1-Pig4-TMW8036I23.3

Conread position: 1-322
Cow position:
Alignm length: 323
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 314

Conread position: 1-396
Cow position:
Alignm length: 397
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 0

Conread position: 1-423
Cow position:
Alignm length: 429
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 108

Conread position: 1-425
Cow position:
Alignm length: 428
Alignm identity: 253
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 8

Conread position: 1-426
Cow position:
Alignm length: 427
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 100

Conread position: 1-426
Cow position:
Alignm length: 427
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 25

Conread position: 1-426
Cow position:
Alignm length: 427
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 261

Conread position: 1-426
Cow position:
Alignm length: 428
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 253

Conread position: 1-426
Cow position:
Alignm length: 427
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 24

Conread position: 1-426
Cow position:
Alignm length: 431
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 29

Conread position: 1-426
Cow position:
Alignm length: 429
Alignm identity: 259
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 183, 187

Conread position: 1-429
Cow position:
Alignm length: 434
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 14

Conread position: 1-454
Cow position:
Alignm length: 454
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-497
Cow position:
Alignm length: 502
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 108

Conread position: 1-503
Cow position:
Alignm length: 509
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 8

Conread position: 1-505
Cow position:
Alignm length: 513
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 24

Conread position: 1-506
Cow position:
Alignm length: 512
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 110

Conread position: 1-507
Cow position:
Alignm length: 512
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 455, 0

Conread position: 1-517
Cow position:
Alignm length: 522
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 454, 0

Conread position: 1-526
Cow position:
Alignm length: 532
Alignm identity: 319
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 246, 255

Conread position: 1-527
Cow position:
Alignm length: 534
Alignm identity: 334
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 281, 277

Conread position: 1-527
Cow position:
Alignm length: 536
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 257

Conread position: 1-541
Cow position:
Alignm length: 553
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 24

Conread position: 1-713
Cow position:
Alignm length: 726
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 455, 533

Conread position: 2-388
Cow position:
Alignm length: 389
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 29

Conread position: 2-418
Cow position:
Alignm length: 418
Alignm identity: 264
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 244, 280

Conread position: 2-425
Cow position:
Alignm length: 426
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 253

Conread position: 2-426
Cow position:
Alignm length: 426
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 113

Conread position: 2-426
Cow position:
Alignm length: 427
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 29

Conread position: 2-426
Cow position:
Alignm length: 430
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 10

Conread position: 2-426
Cow position:
Alignm length: 429
Alignm identity: 279
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 20, 28

Conread position: 2-426
Cow position:
Alignm length: 430
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 29

Conread position: 2-429
Cow position:
Alignm length: 430
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 23

Conread position: 2-443
Cow position:
Alignm length: 443
Alignm identity: 273
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 20, 29

Conread position: 2-472
Cow position:
Alignm length: 479
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 29

Conread position: 2-642
Cow position:
Alignm length: 650
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 22

Conread position: 3-442
Cow position:
Alignm length: 443
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 24

Conread position: 3-505
Cow position:
Alignm length: 509
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 22

Conread position: 3-505
Cow position:
Alignm length: 509
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 104

Conread position: 6-443
Cow position:
Alignm length: 440
Alignm identity: 274
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 16, 25

Conread position: 6-518
Cow position:
Alignm length: 520
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 108

Conread position: 9-515
Cow position:
Alignm length: 513
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 7

Conread position: 11-713
Cow position:
Alignm length: 718
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 96

Conread position: 12-387
Cow position:
Alignm length: 376
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 12-442
Cow position:
Alignm length: 433
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 344

Conread position: 13-296
Cow position:
Alignm length: 284
Alignm identity: 180
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 13-305
Cow position:
Alignm length: 293
Alignm identity: 193
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 13-308
Cow position:
Alignm length: 299
Alignm identity: 196
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 183, 175

Conread position: 13-309
Cow position:
Alignm length: 297
Alignm identity: 196
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 13-353
Cow position:
Alignm length: 342
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 12

Conread position: 13-361
Cow position:
Alignm length: 349
Alignm identity: 226
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 13-380
Cow position:
Alignm length: 368
Alignm identity: 240
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 13-424
Cow position:
Alignm length: 414
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 28

Conread position: 13-425
Cow position:
Alignm length: 415
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 261

Conread position: 13-426
Cow position:
Alignm length: 417
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 97

Conread position: 13-426
Cow position:
Alignm length: 416
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 81, 87

Conread position: 13-426
Cow position:
Alignm length: 415
Alignm identity: 267
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 269, 265

Conread position: 13-457
Cow position:
Alignm length: 448
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 87

Conread position: 13-457
Cow position:
Alignm length: 445
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 13-467
Cow position:
Alignm length: 458
Alignm identity: 273
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 19, 12

Conread position: 13-518
Cow position:
Alignm length: 513
Alignm identity: 323
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 5, 18

Conread position: 13-527
Cow position:
Alignm length: 526
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 13

Conread position: 14-426
Cow position:
Alignm length: 415
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 95

Conread position: 14-518
Cow position:
Alignm length: 512
Alignm identity: 318
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 100, 87

Conread position: 15-222
Cow position:
Alignm length: 208
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 15-336
Cow position:
Alignm length: 325
Alignm identity: 222
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 89, 77

Conread position: 15-402
Cow position:
Alignm length: 390
Alignm identity: 251
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 255, 267

Conread position: 15-418
Cow position:
Alignm length: 409
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 73

Conread position: 15-431
Cow position:
Alignm length: 421
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 13

Conread position: 15-443
Cow position:
Alignm length: 431
Alignm identity: 269
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 14

Conread position: 17-505
Cow position:
Alignm length: 497
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 13

Conread position: 19-473
Cow position:
Alignm length: 457
Alignm identity: 285
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 434, 54

Conread position: 19-493
Cow position:
Alignm length: 482
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 5

Conread position: 20-426
Cow position:
Alignm length: 408
Alignm identity: 263
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 11, 5

Conread position: 20-454
Cow position:
Alignm length: 438
Alignm identity: 276
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 262, 258

Conread position: 20-456
Cow position:
Alignm length: 440
Alignm identity: 282
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 73, 84

Conread position: 20-457
Cow position:
Alignm length: 440
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 10

Conread position: 20-497
Cow position:
Alignm length: 484
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 5

Conread position: 21-229
Cow position:
Alignm length: 210
Alignm identity: 144
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 92, 79

Conread position: 21-446
Cow position:
Alignm length: 428
Alignm identity: 259
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 93, 9

Conread position: 21-505
Cow position:
Alignm length: 493
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 72

Conread position: 25-245
Cow position:
Alignm length: 223
Alignm identity: 172
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 37, 85

Conread position: 26-309
Cow position:
Alignm length: 284
Alignm identity: 189
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 13, 0

Conread position: 27-457
Cow position:
Alignm length: 434
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 231

Conread position: 29-429
Cow position:
Alignm length: 401
Alignm identity: 241
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 29-442
Cow position:
Alignm length: 415
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 230

Conread position: 29-489
Cow position:
Alignm length: 464
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 446

Conread position: 29-527
Cow position:
Alignm length: 506
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 146

Conread position: 30-313
Cow position:
Alignm length: 285
Alignm identity: 189
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 238, 228

Conread position: 30-368
Cow position:
Alignm length: 339
Alignm identity: 214
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 30-393
Cow position:
Alignm length: 364
Alignm identity: 233
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 291, 0

Conread position: 30-417
Cow position:
Alignm length: 389
Alignm identity: 250
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 232, 51

Conread position: 30-425
Cow position:
Alignm length: 397
Alignm identity: 251
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 310, 317

Conread position: 30-426
Cow position:
Alignm length: 398
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 228

Conread position: 30-426
Cow position:
Alignm length: 401
Alignm identity: 254
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 64, 70

Conread position: 30-426
Cow position:
Alignm length: 401
Alignm identity: 253
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 64, 69

Conread position: 30-442
Cow position:
Alignm length: 416
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 81

Conread position: 30-442
Cow position:
Alignm length: 416
Alignm identity: 266
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 23, 42

Conread position: 30-454
Cow position:
Alignm length: 426
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 75

Conread position: 30-454
Cow position:
Alignm length: 428
Alignm identity: 273
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 236, 225

Conread position: 30-454
Cow position:
Alignm length: 426
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 344

Conread position: 30-454
Cow position:
Alignm length: 426
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 246

Conread position: 30-454
Cow position:
Alignm length: 427
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 222

Conread position: 30-454
Cow position:
Alignm length: 425
Alignm identity: 268
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 30-456
Cow position:
Alignm length: 428
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 71

Conread position: 30-473
Cow position:
Alignm length: 446
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 106

Conread position: 30-474
Cow position:
Alignm length: 450
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 84

Conread position: 30-493
Cow position:
Alignm length: 468
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 252

Conread position: 30-496
Cow position:
Alignm length: 472
Alignm identity: 299
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 69

Conread position: 30-507
Cow position:
Alignm length: 485
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 81

Conread position: 30-516
Cow position:
Alignm length: 495
Alignm identity: 315
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 217, 226

Conread position: 30-517
Cow position:
Alignm length: 493
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 425, 0

Conread position: 31-425
Cow position:
Alignm length: 395
Alignm identity: 247
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 31-437
Cow position:
Alignm length: 410
Alignm identity: 256
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 20

Conread position: 33-416
Cow position:
Alignm length: 386
Alignm identity: 231
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 216, 9

Conread position: 34-454
Cow position:
Alignm length: 423
Alignm identity: 264
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 315, 304

Conread position: 35-454
Cow position:
Alignm length: 424
Alignm identity: 270
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 64, 59

Conread position: 36-426
Cow position:
Alignm length: 394
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 307

Conread position: 36-426
Cow position:
Alignm length: 393
Alignm identity: 253
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 80, 69

Conread position: 36-464
Cow position:
Alignm length: 432
Alignm identity: 260
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 62, 57

Conread position: 37-536
Cow position:
Alignm length: 508
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 61

Conread position: 38-493
Cow position:
Alignm length: 459
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 418, 0

Conread position: 39-493
Cow position:
Alignm length: 460
Alignm identity: 281
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 237, 244

Conread position: 42-426
Cow position:
Alignm length: 386
Alignm identity: 236
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 52

Conread position: 42-426
Cow position:
Alignm length: 387
Alignm identity: 237
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 72, 64

Conread position: 42-426
Cow position:
Alignm length: 386
Alignm identity: 242
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 65, 52

Conread position: 42-427
Cow position:
Alignm length: 392
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 73

Conread position: 42-456
Cow position:
Alignm length: 415
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 42-513
Cow position:
Alignm length: 477
Alignm identity: 295
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 403, 0

Conread position: 42-513
Cow position:
Alignm length: 477
Alignm identity: 292
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 403, 0

Conread position: 46-426
Cow position:
Alignm length: 383
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 52

Conread position: 48-427
Cow position:
Alignm length: 380
Alignm identity: 244
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 51-532
Cow position:
Alignm length: 487
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 0

Conread position: 110-426
Cow position:
Alignm length: 321
Alignm identity: 205
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 160, 8

Conread position: 111-426
Cow position:
Alignm length: 316
Alignm identity: 190
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 112-426
Cow position:
Alignm length: 316
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 135, 160

Conread position: 119-306
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 125-454
Cow position:
Alignm length: 332
Alignm identity: 205
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 140, 129

Conread position: 189-650
Cow position:
Alignm length: 471
Alignm identity: 307
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 162, 152

Conread position: 195-426
Cow position:
Alignm length: 234
Alignm identity: 154
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 63

Conread position: 197-424
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 57, 69

Conread position: 219-515
Cow position:
Alignm length: 302
Alignm identity: 200
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 237, 0

Show alignments to all cow chromosomes.