Cow genome map

Conread name: Ss1.1-Pig4-TMW8036I23.3

Conread position: 1-477
Cow position: chr17:22452345-22451867 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 455, 0

Conread position: 1-493
Cow position: chr17:22499107-22498612 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 455, 0

Conread position: 1-493
Cow position: chr17:22499275-22498780 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 340

Conread position: 1-503
Cow position: chr17:22552732-22552225 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 25

Conread position: 1-504
Cow position: chr17:22552648-22552140 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 29

Conread position: 1-516
Cow position: chr17:22499023-22498512 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 477, 0

Conread position: 1-516
Cow position: chr17:22589814-22589294 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 110

Conread position: 2-401
Cow position: chr17:22452008-22451609 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 258
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 28

Conread position: 2-425
Cow position: chr17:41440834-41440411 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 254
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 29, 23

Conread position: 3-507
Cow position: chr17:22590232-22589723 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 441, 0

Conread position: 13-498
Cow position: chr17:22452249-22451760 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 247

Conread position: 15-504
Cow position: chr17:22590136-22589642 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 94

Conread position: 19-235
Cow position: chr17:22551706-22551490 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 71, 81

Conread position: 19-473
Cow position: chr17:22452411-22451955 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 437, 0

Conread position: 22-426
Cow position: chr17:22552207-22551803 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 93

Conread position: 22-454
Cow position: chr17:22553047-22552615 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 78

Conread position: 22-496
Cow position: chr17:22499170-22498693 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 155

Conread position: 28-413
Cow position: chr17:22551865-22551480 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 72

Conread position: 28-547
Cow position: chr17:22473397-22473914 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 66

Conread position: 29-321
Cow position: chr17:22498743-22498460 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 207, 0

Conread position: 29-424
Cow position: chr17:22552788-22552393 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 229

Conread position: 29-454
Cow position: chr17:22552116-22551691 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 29-503
Cow position: chr17:22552032-22551553 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 86

Conread position: 29-503
Cow position: chr17:22552956-22552477 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 86

Conread position: 29-505
Cow position: chr17:22473233-22473711 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 30

Conread position: 29-527
Cow position: chr17:22552368-22551865 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 81

Conread position: 29-706
Cow position: chr17:22499331-22498645 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 312

Conread position: 30-247
Cow position: chr17:22473735-22473953 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 189, 0

Conread position: 30-389
Cow position: chr17:22452064-22451705 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 85

Conread position: 30-426
Cow position: chr17:22552871-22552475 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 85

Conread position: 30-453
Cow position: chr17:22551947-22551524 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 57

Conread position: 30-456
Cow position: chr17:22589869-22589443 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 311

Conread position: 30-467
Cow position: chr17:22473483-22473922 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 426, 0

Conread position: 30-477
Cow position: chr17:22589701-22589252 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 79

Conread position: 30-505
Cow position: chr17:22590289-22589809 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 239

Conread position: 30-517
Cow position: chr17:22552283-22551791 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 426, 0

Conread position: 31-474
Cow position: chr17:22553122-22552677 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 238

Conread position: 34-493
Cow position: chr17:22473319-22473781 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 67

Conread position: 37-392
Cow position: chr17:22589526-22589173 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 228
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 148, 140

Conread position: 46-504
Cow position: chr17:22499398-22498935 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 0

Conread position: 85-454
Cow position: chr17:22452513-22452144 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 184
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 261, 248

Conread position: 105-521
Cow position: chr17:22590298-22589877 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 0

Conread position: 109-505
Cow position: chr17:22499419-22499018 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 13

Conread position: 178-503
Cow position: chr17:22553143-22552813 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 210
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 69, 82

Conread position: 183-653
Cow position: chr17:22590304-22589830 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 297
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 273, 342

Show alignments to all cow chromosomes.