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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8036I23.3
        

               
Conread position:
               
1-161
               

               
Cow position:
               
chr18:43119614-43119454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr18:40324091-40323918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr18:43053422-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr18:53586206-53585972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
180, 176
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr18:51400989-51401226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
114, 109
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr18:42674612-42674365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
183, 176
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr18:52428762-52429010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr18:52433943-52434191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr18:51367474-51367218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
90, 97
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr18:42959683-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:44240550-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 8
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr18:42837395-42837095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 24
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:56247364-56247042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr18:14453083-14452752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
250, 0
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr18:49032421-49032091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr18:53560467-53560797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
188, 183
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr18:52011902-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr18:53610010-53609674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
114, 109
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr18:41948639-41948303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 108
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr18:51367558-51367220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr18:42984851-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr18:43022362-43021979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr18:42744176-42743789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 24
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr18:41198368-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 102
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr18:44184345-44183953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr18:42792513-42792912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr18:33063977-33063576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 259
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr18:53635335-53634935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 110
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr18:56128830-56129230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 110
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr18:51789184-51788770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 186
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr18:52447985-52448405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 17
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr18:56494133-56494551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 353
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr18:44253770-44253349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
387, 0
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr18:40085899-40085463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 108
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr18:40306794-40307217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 326
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr18:56493881-56494304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
92, 106
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr18:53636007-53635583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 327
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr18:52012406-52011981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr18:53610430-53610005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 24
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr18:56128326-56128751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
92, 100
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr18:56316254-56316679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 17
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr18:56330150-56329725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr18:52012154-52011707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 178
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:52012238-52011788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 175
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:56329898-56329448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 108
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr18:44240382-44240835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 114
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr18:42837563-42837109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr18:43048691-43048239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 108
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr18:14453899-14453444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
372, 368
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr18:33064229-33063774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr18:42674864-42674408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 110
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr18:56316170-56316626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 100
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr18:44253195-44252743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 78
               

               
Conread position:
               
1-470
               

               
Cow position:
               
chr18:44184429-44183958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 97
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr18:52012070-52011596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 349
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr18:42960262-42959784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr18:43174899-43174427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 108
               

               
Conread position:
               
1-493
               

               
Cow position:
               
chr18:42985187-42984692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
1-493
               

               
Cow position:
               
chr18:51839356-51838861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
456, 0
               

               
Conread position:
               
1-496
               

               
Cow position:
               
chr18:40086309-40085821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
455, 101
               

               
Conread position:
               
1-497
               

               
Cow position:
               
chr18:43093633-43093133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 114
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr18:33064397-33063902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
365, 354
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr18:40086899-40086402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 124
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr18:44253686-44253204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 313
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr18:50049186-50048679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr18:41949227-41948718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
456, 0
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr18:42674948-42674439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 182
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr18:43022530-43022021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 8
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr18:44184765-44184256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr18:44184849-44184340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 97
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr18:44240298-44240807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr18:51789856-51789347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
455, 0
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr18:52427754-52428263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 326
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr18:52428174-52428683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 96
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr18:52433103-52433612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 326
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr18:52433355-52433864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 96
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr18:40086650-40086135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 49
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr18:52428426-52428943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr18:52433607-52434124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:52012322-52011804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 340
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:55017917-55018436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 185
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:43175235-43174715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:51789687-51789168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 10
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:52447145-52447665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 214
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:52447397-52447917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:44153994-44153492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr18:56247776-56247263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:42744428-42743906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 110
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:53586878-53586356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 352
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr18:43022698-43022168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
1-526
               

               
Cow position:
               
chr18:42675368-42674837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
441, 427
               

               
Conread position:
               
1-526
               

               
Cow position:
               
chr18:42837815-42837284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
455, 0
               

               
Conread position:
               
1-526
               

               
Cow position:
               
chr18:42985271-42984740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 8
               

               
Conread position:
               
1-526
               

               
Cow position:
               
chr18:44254018-44253491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
455, 120
               

               
Conread position:
               
1-527
               

               
Cow position:
               
chr18:33064901-33064369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 271
               

               
Conread position:
               
1-534
               

               
Cow position:
               
chr18:44154417-44153875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 428
               

               
Conread position:
               
1-535
               

               
Cow position:
               
chr18:51969060-51969580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
103, 93
               

               
Conread position:
               
1-650
               

               
Cow position:
               
chr18:42960094-42959450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
1-650
               

               
Cow position:
               
chr18:43023034-43022381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 8
               

               
Conread position:
               
1-650
               

               
Cow position:
               
chr18:43175487-43174834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 24
               

               
Conread position:
               
1-706
               

               
Cow position:
               
chr18:40324679-40323965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 24
               

               
Conread position:
               
1-706
               

               
Cow position:
               
chr18:42744512-42743798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 257
               

               
Conread position:
               
1-706
               

               
Cow position:
               
chr18:42985523-42984809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 24
               

               
Conread position:
               
1-706
               

               
Cow position:
               
chr18:52447229-52447943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
416, 434
               

               
Conread position:
               
1-713
               

               
Cow position:
               
chr18:42837899-42837178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
455, 531
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr18:51765120-51764909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
113, 97
               

               
Conread position:
               
2-353
               

               
Cow position:
               
chr18:51789015-51788665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
329, 0
               

               
Conread position:
               
2-353
               

               
Cow position:
               
chr18:51812258-51811907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr18:44240467-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr18:51839523-51839133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
113, 108
               

               
Conread position:
               
2-418
               

               
Cow position:
               
chr18:40324342-40323927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 96
               

               
Conread position:
               
2-418
               

               
Cow position:
               
chr18:53586709-53586293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
175, 184
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr18:44253111-44252699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr18:53525814-53526236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 277
               

               
Conread position:
               
2-425
               

               
Cow position:
               
chr18:50059333-50058910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 253
               

               
Conread position:
               
2-426
               

               
Cow position:
               
chr18:42724550-42724126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
260, 249
               

               
Conread position:
               
2-442
               

               
Cow position:
               
chr18:42791085-42791526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr18:33064984-33064532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr18:42693506-42693055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
112, 92
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr18:42693926-42693474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
24, 29
               

               
Conread position:
               
2-470
               

               
Cow position:
               
chr18:43119949-43119479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 91
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr18:33064816-33064342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 92
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr18:41948806-41948332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 91
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr18:55523346-55523829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
91, 108
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr18:43167830-43168324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
455, 0
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr18:51766044-51765550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 61
               

               
Conread position:
               
2-497
               

               
Cow position:
               
chr18:40075145-40075644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 264
               

               
Conread position:
               
2-497
               

               
Cow position:
               
chr18:53509360-53509859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 270
               

               
Conread position:
               
2-503
               

               
Cow position:
               
chr18:51368396-51367890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 110
               

               
Conread position:
               
2-505
               

               
Cow position:
               
chr18:42960345-42959837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 107
               

               
Conread position:
               
2-505
               

               
Cow position:
               
chr18:43175570-43175062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
2-506
               

               
Cow position:
               
chr18:52433020-52433529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr18:43120117-43119598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
2-518
               

               
Cow position:
               
chr18:52427671-52428192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
2-523
               

               
Cow position:
               
chr18:53586373-53585855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 271
               

               
Conread position:
               
2-669
               

               
Cow position:
               
chr18:53586625-53585950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 185
               

               
Conread position:
               
2-713
               

               
Cow position:
               
chr18:42744595-42743875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
454, 532
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr18:44397728-44397503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
91, 103
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr18:40307049-40307343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 8
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr18:54980439-54980747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
159, 125
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr18:51751792-51751470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
101, 93
               

               
Conread position:
               
3-368
               

               
Cow position:
               
chr18:50849130-50849495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
112, 88
               

               
Conread position:
               
3-400
               

               
Cow position:
               
chr18:14453729-14453329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
242, 262
               

               
Conread position:
               
3-411
               

               
Cow position:
               
chr18:14453165-14452756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
333, 319
               

               
Conread position:
               
3-416
               

               
Cow position:
               
chr18:55018423-55018838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
3-418
               

               
Cow position:
               
chr18:56434010-56434415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
243, 8
               

               
Conread position:
               
3-421
               

               
Cow position:
               
chr18:54993531-54993947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
357, 363
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr18:51367640-51367219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 108
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr18:54993195-54993615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 0
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr18:55008850-55009271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-427
               

               
Cow position:
               
chr18:54967995-54968417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
95, 36
               

               
Conread position:
               
3-431
               

               
Cow position:
               
chr18:33065151-33064723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
3-436
               

               
Cow position:
               
chr18:52012486-52012055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
3-454
               

               
Cow position:
               
chr18:54967827-54968276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 200
               

               
Conread position:
               
3-454
               

               
Cow position:
               
chr18:54980103-54980554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-454
               

               
Cow position:
               
chr18:54993447-54993898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 162
               

               
Conread position:
               
3-466
               

               
Cow position:
               
chr18:43022444-43021979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
3-472
               

               
Cow position:
               
chr18:56433839-56434303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 178
               

               
Conread position:
               
3-473
               

               
Cow position:
               
chr18:53509529-53509999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
3-473
               

               
Cow position:
               
chr18:53525983-53526453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
3-489
               

               
Cow position:
               
chr18:51789266-51788777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
442, 453
               

               
Conread position:
               
3-493
               

               
Cow position:
               
chr18:51812509-51812016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
442, 453
               

               
Conread position:
               
3-497
               

               
Cow position:
               
chr18:44253277-44252789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
472, 162
               

               
Conread position:
               
3-503
               

               
Cow position:
               
chr18:44184595-44184089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 112
               

               
Conread position:
               
3-504
               

               
Cow position:
               
chr18:54993111-54993617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
3-505
               

               
Cow position:
               
chr18:40086141-40085641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
3-505
               

               
Cow position:
               
chr18:42985017-42984510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
3-505
               

               
Cow position:
               
chr18:43175065-43174558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
3-505
               

               
Cow position:
               
chr18:44184679-44184172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
453, 0
               

               
Conread position:
               
3-505
               

               
Cow position:
               
chr18:44239880-44240387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
3-508
               

               
Cow position:
               
chr18:41948973-41948464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
3-514
               

               
Cow position:
               
chr18:43175317-43174801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
444, 436
               

               
Conread position:
               
3-517
               

               
Cow position:
               
chr18:51368143-51367625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
3-521
               

               
Cow position:
               
chr18:41197530-41198053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
432, 412
               

               
Conread position:
               
3-525
               

               
Cow position:
               
chr18:41949309-41948781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
453, 0
               

               
Conread position:
               
3-527
               

               
Cow position:
               
chr18:56493712-56494245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
3-655
               

               
Cow position:
               
chr18:40324761-40324105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 255
               

               
Conread position:
               
4-418
               

               
Cow position:
               
chr18:54979852-54980266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 97
               

               
Conread position:
               
4-418
               

               
Cow position:
               
chr18:55018172-55018586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 175
               

               
Conread position:
               
4-505
               

               
Cow position:
               
chr18:42985101-42984594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 12
               

               
Conread position:
               
6-402
               

               
Cow position:
               
chr18:51873580-51873970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
72, 10
               

               
Conread position:
               
8-504
               

               
Cow position:
               
chr18:54992864-54993364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 270
               

               
Conread position:
               
9-400
               

               
Cow position:
               
chr18:33092809-33092418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
93, 98
               

               
Conread position:
               
11-415
               

               
Cow position:
               
chr18:51812417-51812013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-418
               

               
Cow position:
               
chr18:56434344-56434751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
165, 177
               

               
Conread position:
               
12-322
               

               
Cow position:
               
chr18:56316517-56316827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
167, 156
               

               
Conread position:
               
12-457
               

               
Cow position:
               
chr18:42984923-42984479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
12-517
               

               
Cow position:
               
chr18:51752287-51751777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 98
               

               
Conread position:
               
13-192
               

               
Cow position:
               
chr18:56328962-56328779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
13-223
               

               
Cow position:
               
chr18:40075492-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-236
               

               
Cow position:
               
chr18:51873749-51873972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-257
               

               
Cow position:
               
chr18:56129010-56129253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
13-261
               

               
Cow position:
               
chr18:55075137-55075386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
142, 173
               

               
Conread position:
               
13-297
               

               
Cow position:
               
chr18:56267411-56267127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
253, 242
               

               
Conread position:
               
13-316
               

               
Cow position:
               
chr18:53572027-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 36
               

               
Conread position:
               
13-342
               

               
Cow position:
               
chr18:53635155-53634828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
13-385
               

               
Cow position:
               
chr18:56329212-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
13-396
               

               
Cow position:
               
chr18:49032325-49031945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 91
               

               
Conread position:
               
13-398
               

               
Cow position:
               
chr18:49022863-49023248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
234, 249
               

               
Conread position:
               
13-420
               

               
Cow position:
               
chr18:14453803-14453395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
402, 0
               

               
Conread position:
               
13-422
               

               
Cow position:
               
chr18:53610082-53609674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 308
               

               
Conread position:
               
13-424
               

               
Cow position:
               
chr18:40306554-40306965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-424
               

               
Cow position:
               
chr18:49022695-49023106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
182, 173
               

               
Conread position:
               
13-426
               

               
Cow position:
               
chr18:40075240-40075653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
49, 41
               

               
Conread position:
               
13-426
               

               
Cow position:
               
chr18:56128758-56129171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
13-437
               

               
Cow position:
               
chr18:51400665-51401089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 97
               

               
Conread position:
               
13-437
               

               
Cow position:
               
chr18:51752034-51751610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 338
               

               
Conread position:
               
13-452
               

               
Cow position:
               
chr18:53560143-53560582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 259
               

               
Conread position:
               
13-457
               

               
Cow position:
               
chr18:40306890-40307334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 79
               

               
Conread position:
               
13-473
               

               
Cow position:
               
chr18:49033249-49032787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 241
               

               
Conread position:
               
13-496
               

               
Cow position:
               
chr18:56494061-56494544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-503
               

               
Cow position:
               
chr18:44398390-44397895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 249
               

               
Conread position:
               
13-505
               

               
Cow position:
               
chr18:40306470-40306967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 83
               

               
Conread position:
               
13-505
               

               
Cow position:
               
chr18:52447745-52448242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 89
               

               
Conread position:
               
13-517
               

               
Cow position:
               
chr18:52447073-52447582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 12
               

               
Conread position:
               
14-391
               

               
Cow position:
               
chr18:40075325-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
82, 93
               

               
Conread position:
               
14-394
               

               
Cow position:
               
chr18:51400750-51401130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 80
               

               
Conread position:
               
14-418
               

               
Cow position:
               
chr18:22634690-22635094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
47, 40
               

               
Conread position:
               
14-425
               

               
Cow position:
               
chr18:40075073-40075484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
14-426
               

               
Cow position:
               
chr18:56316435-56316847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 241
               

               
Conread position:
               
14-442
               

               
Cow position:
               
chr18:49032492-49032064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 258
               

               
Conread position:
               
14-473
               

               
Cow position:
               
chr18:49032660-49032199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 264
               

               
Conread position:
               
14-517
               

               
Cow position:
               
chr18:51368468-51367960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
445, 0
               

               
Conread position:
               
14-524
               

               
Cow position:
               
chr18:53559892-53560408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 82
               

               
Conread position:
               
14-526
               

               
Cow position:
               
chr18:49032744-49032226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 244
               

               
Conread position:
               
15-223
               

               
Cow position:
               
chr18:50021590-50021381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
100, 86
               

               
Conread position:
               
15-256
               

               
Cow position:
               
chr18:53498695-53498938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
133, 159
               

               
Conread position:
               
15-312
               

               
Cow position:
               
chr18:1418305-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
232, 259
               

               
Conread position:
               
15-313
               

               
Cow position:
               
chr18:56316604-56316902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
15-414
               

               
Cow position:
               
chr18:42693577-42693179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
231, 267
               

               
Conread position:
               
15-416
               

               
Cow position:
               
chr18:42693997-42693596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
99, 95
               

               
Conread position:
               
15-416
               

               
Cow position:
               
chr18:54967254-54967655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
87, 96
               

               
Conread position:
               
15-418
               

               
Cow position:
               
chr18:52446834-52447226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
15-424
               

               
Cow position:
               
chr18:53560229-53560638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
15-425
               

               
Cow position:
               
chr18:50245709-50246118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
45, 6
               

               
Conread position:
               
15-426
               

               
Cow position:
               
chr18:1418137-1418548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 32
               

               
Conread position:
               
15-426
               

               
Cow position:
               
chr18:50098942-50099353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
259, 239
               

               
Conread position:
               
15-427
               

               
Cow position:
               
chr18:53635657-53635245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 260
               

               
Conread position:
               
15-427
               

               
Cow position:
               
chr18:56128256-56128668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 100
               

               
Conread position:
               
15-427
               

               
Cow position:
               
chr18:56128508-56128920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 251
               

               
Conread position:
               
15-442
               

               
Cow position:
               
chr18:50281810-50282236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
234, 8
               

               
Conread position:
               
15-451
               

               
Cow position:
               
chr18:53587116-53586680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
15-454
               

               
Cow position:
               
chr18:54979779-54980218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
428, 424
               

               
Conread position:
               
15-454
               

               
Cow position:
               
chr18:56329799-56329361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
15-470
               

               
Cow position:
               
chr18:53635405-53634949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 372
               

               
Conread position:
               
15-473
               

               
Cow position:
               
chr18:49032995-49032535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 87
               

               
Conread position:
               
15-479
               

               
Cow position:
               
chr18:40324833-40324368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
442, 459
               

               
Conread position:
               
15-497
               

               
Cow position:
               
chr18:40306640-40307126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
434, 0
               

               
Conread position:
               
15-497
               

               
Cow position:
               
chr18:41197710-41198196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 244
               

               
Conread position:
               
15-497
               

               
Cow position:
               
chr18:50059488-50059002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 169
               

               
Conread position:
               
15-497
               

               
Cow position:
               
chr18:50099110-50099596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 92
               

               
Conread position:
               
15-505
               

               
Cow position:
               
chr18:43093367-43092872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 243
               

               
Conread position:
               
15-505
               

               
Cow position:
               
chr18:52432949-52433444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 80
               

               
Conread position:
               
15-506
               

               
Cow position:
               
chr18:52427600-52428096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 80
               

               
Conread position:
               
15-508
               

               
Cow position:
               
chr18:50083333-50083830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
15-517
               

               
Cow position:
               
chr18:41198298-41198806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
441, 0
               

               
Conread position:
               
15-518
               

               
Cow position:
               
chr18:41197794-41198302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 86
               

               
Conread position:
               
15-518
               

               
Cow position:
               
chr18:42792023-42792531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 240
               

               
Conread position:
               
15-518
               

               
Cow position:
               
chr18:53560313-53560817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 81
               

               
Conread position:
               
15-521
               

               
Cow position:
               
chr18:42791603-42792114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
15-524
               

               
Cow position:
               
chr18:53498020-53498538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
232, 259
               

               
Conread position:
               
16-305
               

               
Cow position:
               
chr18:44397799-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-400
               

               
Cow position:
               
chr18:53571947-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 38
               

               
Conread position:
               
16-454
               

               
Cow position:
               
chr18:49022615-49023052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 8
               

               
Conread position:
               
16-493
               

               
Cow position:
               
chr18:51789421-51788941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 248
               

               
Conread position:
               
16-519
               

               
Cow position:
               
chr18:42791436-42791944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 99
               

               
Conread position:
               
16-524
               

               
Cow position:
               
chr18:53559978-53560492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 94
               

               
Conread position:
               
17-424
               

               
Cow position:
               
chr18:14453966-14453561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
17-424
               

               
Cow position:
               
chr18:41948706-41948302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 7
               

               
Conread position:
               
17-424
               

               
Cow position:
               
chr18:51367709-51367303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
17-425
               

               
Cow position:
               
chr18:50083839-50084247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
17-426
               

               
Cow position:
               
chr18:50245962-50246371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 98
               

               
Conread position:
               
17-454
               

               
Cow position:
               
chr18:50848809-50849245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
17-456
               

               
Cow position:
               
chr18:50295242-50295680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
232, 6
               

               
Conread position:
               
17-474
               

               
Cow position:
               
chr18:42791942-42792400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 13
               

               
Conread position:
               
17-499
               

               
Cow position:
               
chr18:41948874-41948396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
439, 7
               

               
Conread position:
               
17-504
               

               
Cow position:
               
chr18:43120269-43119779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 7
               

               
Conread position:
               
17-505
               

               
Cow position:
               
chr18:41949042-41948550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 7
               

               
Conread position:
               
17-505
               

               
Cow position:
               
chr18:42744663-42744171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
439, 9
               

               
Conread position:
               
17-505
               

               
Cow position:
               
chr18:44240063-44240555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 9
               

               
Conread position:
               
17-505
               

               
Cow position:
               
chr18:52427937-52428431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 172
               

               
Conread position:
               
17-505
               

               
Cow position:
               
chr18:52433286-52433780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 257
               

               
Conread position:
               
17-515
               

               
Cow position:
               
chr18:55018017-55018520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
425, 421
               

               
Conread position:
               
17-515
               

               
Cow position:
               
chr18:55066889-55066386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
442, 0
               

               
Conread position:
               
17-516
               

               
Cow position:
               
chr18:55008696-55009200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
175, 180
               

               
Conread position:
               
17-519
               

               
Cow position:
               
chr18:43022765-43022259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 7
               

               
Conread position:
               
17-520
               

               
Cow position:
               
chr18:55018354-55018867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
344, 6
               

               
Conread position:
               
17-521
               

               
Cow position:
               
chr18:50848555-50849065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 84
               

               
Conread position:
               
17-706
               

               
Cow position:
               
chr18:43175134-43174446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 7
               

               
Conread position:
               
17-706
               

               
Cow position:
               
chr18:52447580-52448279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 83
               

               
Conread position:
               
18-396
               

               
Cow position:
               
chr18:1418225-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
18-413
               

               
Cow position:
               
chr18:43119848-43119454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 6
               

               
Conread position:
               
18-418
               

               
Cow position:
               
chr18:50295494-50295893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
76, 97
               

               
Conread position:
               
18-418
               

               
Cow position:
               
chr18:54979446-54979846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
75, 97
               

               
Conread position:
               
18-426
               

               
Cow position:
               
chr18:1418056-1418464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 237
               

               
Conread position:
               
18-444
               

               
Cow position:
               
chr18:51874194-51874620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 236
               

               
Conread position:
               
18-454
               

               
Cow position:
               
chr18:54992706-54993142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
424, 420
               

               
Conread position:
               
18-489
               

               
Cow position:
               
chr18:51765525-51765050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
5, 173
               

               
Conread position:
               
18-503
               

               
Cow position:
               
chr18:33064548-33064057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 254
               

               
Conread position:
               
18-503
               

               
Cow position:
               
chr18:43093448-43092958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 82
               

               
Conread position:
               
18-505
               

               
Cow position:
               
chr18:43093940-43093460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 169
               

               
Conread position:
               
18-505
               

               
Cow position:
               
chr18:43120016-43119525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 7
               

               
Conread position:
               
18-518
               

               
Cow position:
               
chr18:44253916-44253416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 6
               

               
Conread position:
               
18-536
               

               
Cow position:
               
chr18:54979698-54980220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
177, 168
               

               
Conread position:
               
18-706
               

               
Cow position:
               
chr18:51812998-51812301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
438, 519
               

               
Conread position:
               
19-230
               

               
Cow position:
               
chr18:42827711-42827922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
197, 202
               

               
Conread position:
               
19-329
               

               
Cow position:
               
chr18:44153574-44153267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
19-334
               

               
Cow position:
               
chr18:56316692-56317007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-392
               

               
Cow position:
               
chr18:56267489-56267116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
73, 80
               

               
Conread position:
               
19-415
               

               
Cow position:
               
chr18:42693657-42693261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
247, 240
               

               
Conread position:
               
19-415
               

               
Cow position:
               
chr18:50030676-50030282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 255
               

               
Conread position:
               
19-416
               

               
Cow position:
               
chr18:49022283-49022678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
83, 95
               

               
Conread position:
               
19-427
               

               
Cow position:
               
chr18:53635905-53635497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
247, 235
               

               
Conread position:
               
19-428
               

               
Cow position:
               
chr18:43093195-43092787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 239
               

               
Conread position:
               
19-454
               

               
Cow position:
               
chr18:44397964-44397529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-456
               

               
Cow position:
               
chr18:56128680-56129117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 85
               

               
Conread position:
               
19-457
               

               
Cow position:
               
chr18:43168099-43168537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 81
               

               
Conread position:
               
19-474
               

               
Cow position:
               
chr18:53635485-53635029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 96
               

               
Conread position:
               
19-497
               

               
Cow position:
               
chr18:42675433-42674952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
437, 5
               

               
Conread position:
               
19-503
               

               
Cow position:
               
chr18:42675014-42674525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
437, 0
               

               
Conread position:
               
19-515
               

               
Cow position:
               
chr18:40306308-40306809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 246
               

               
Conread position:
               
19-515
               

               
Cow position:
               
chr18:56329376-56328875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
439, 0
               

               
Conread position:
               
19-516
               

               
Cow position:
               
chr18:42792195-42792697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 81
               

               
Conread position:
               
19-518
               

               
Cow position:
               
chr18:54979615-54980119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
175, 167
               

               
Conread position:
               
19-526
               

               
Cow position:
               
chr18:44240148-44240661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
439, 0
               

               
Conread position:
               
19-529
               

               
Cow position:
               
chr18:51812829-51812315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
439, 509
               

               
Conread position:
               
19-556
               

               
Cow position:
               
chr18:49033327-49032793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 239
               

               
Conread position:
               
20-454
               

               
Cow position:
               
chr18:52446759-52447178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
89, 5
               

               
Conread position:
               
20-474
               

               
Cow position:
               
chr18:14453316-14452860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
432, 0
               

               
Conread position:
               
20-504
               

               
Cow position:
               
chr18:43023098-43022610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 9
               

               
Conread position:
               
20-518
               

               
Cow position:
               
chr18:42744742-42744242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
433, 16
               

               
Conread position:
               
21-249
               

               
Cow position:
               
chr18:42693152-42692925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
139, 152
               

               
Conread position:
               
21-418
               

               
Cow position:
               
chr18:55008534-55008929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
158, 22
               

               
Conread position:
               
21-424
               

               
Cow position:
               
chr18:56128430-56128833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 180
               

               
Conread position:
               
21-430
               

               
Cow position:
               
chr18:33092965-33092556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 78
               

               
Conread position:
               
21-447
               

               
Cow position:
               
chr18:53635735-53635309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 180
               

               
Conread position:
               
21-457
               

               
Cow position:
               
chr18:42827461-42827897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 306
               

               
Conread position:
               
22-226
               

               
Cow position:
               
chr18:50271939-50272143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
22-295
               

               
Cow position:
               
chr18:50021667-50021394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
244, 233
               

               
Conread position:
               
22-310
               

               
Cow position:
               
chr18:50100041-50100329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
22-311
               

               
Cow position:
               
chr18:56316779-56317068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
193, 198
               

               
Conread position:
               
22-319
               

               
Cow position:
               
chr18:55066632-55066335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
159, 148
               

               
Conread position:
               
22-339
               

               
Cow position:
               
chr18:49022956-49023273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
69, 75
               

               
Conread position:
               
22-349
               

               
Cow position:
               
chr18:56128935-56129260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
197, 0
               

               
Conread position:
               
22-375
               

               
Cow position:
               
chr18:50246471-50246824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
72, 87
               

               
Conread position:
               
22-405
               

               
Cow position:
               
chr18:43168186-43168567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 71
               

               
Conread position:
               
22-418
               

               
Cow position:
               
chr18:54966925-54967321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
260, 237
               

               
Conread position:
               
22-418
               

               
Cow position:
               
chr18:55523450-55523846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
240, 230
               

               
Conread position:
               
22-422
               

               
Cow position:
               
chr18:52011965-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
22-425
               

               
Cow position:
               
chr18:50022261-50021855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
68, 81
               

               
Conread position:
               
22-425
               

               
Cow position:
               
chr18:50031008-50030606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 70
               

               
Conread position:
               
22-425
               

               
Cow position:
               
chr18:50058809-50058408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 83
               

               
Conread position:
               
22-425
               

               
Cow position:
               
chr18:50059061-50058658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 93
               

               
Conread position:
               
22-425
               

               
Cow position:
               
chr18:50099369-50099772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 83
               

               
Conread position:
               
22-426
               

               
Cow position:
               
chr18:50048829-50048425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
80, 89
               

               
Conread position:
               
22-426
               

               
Cow position:
               
chr18:50246135-50246539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
73, 88
               

               
Conread position:
               
22-426
               

               
Cow position:
               
chr18:50246303-50246707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 167
               

               
Conread position:
               
22-454
               

               
Cow position:
               
chr18:50030927-50030490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 87
               

               
Conread position:
               
22-474
               

               
Cow position:
               
chr18:51400338-51400792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 232
               

               
Conread position:
               
22-474
               

               
Cow position:
               
chr18:51765856-51765402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
399, 417
               

               
Conread position:
               
22-497
               

               
Cow position:
               
chr18:41198221-41198700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 78
               

               
Conread position:
               
22-503
               

               
Cow position:
               
chr18:50058893-50058409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 251
               

               
Conread position:
               
22-503
               

               
Cow position:
               
chr18:50099033-50099519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 154
               

               
Conread position:
               
22-505
               

               
Cow position:
               
chr18:41949374-41948886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
433, 0
               

               
Conread position:
               
22-511
               

               
Cow position:
               
chr18:50271603-50272097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 234
               

               
Conread position:
               
22-515
               

               
Cow position:
               
chr18:49033156-49032658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 5
               

               
Conread position:
               
22-517
               

               
Cow position:
               
chr18:1417976-1418476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 193
               

               
Conread position:
               
22-518
               

               
Cow position:
               
chr18:40324490-40323989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 155
               

               
Conread position:
               
22-519
               

               
Cow position:
               
chr18:50271519-50272020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 232
               

               
Conread position:
               
22-527
               

               
Cow position:
               
chr18:42837962-42837451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
431, 0
               

               
Conread position:
               
22-628
               

               
Cow position:
               
chr18:43120349-43119739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 71
               

               
Conread position:
               
22-715
               

               
Cow position:
               
chr18:41949122-41948420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 87
               

               
Conread position:
               
24-261
               

               
Cow position:
               
chr18:43119675-43119438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
181, 177
               

               
Conread position:
               
24-319
               

               
Cow position:
               
chr18:52428701-52428996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-319
               

               
Cow position:
               
chr18:52433882-52434177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-402
               

               
Cow position:
               
chr18:52428617-52428995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 237
               

               
Conread position:
               
24-402
               

               
Cow position:
               
chr18:52433798-52434176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 237
               

               
Conread position:
               
24-426
               

               
Cow position:
               
chr18:40306229-40306631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
349, 345
               

               
Conread position:
               
24-426
               

               
Cow position:
               
chr18:50048995-50048593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 332
               

               
Conread position:
               
24-470
               

               
Cow position:
               
chr18:52428365-52428813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 303
               

               
Conread position:
               
24-470
               

               
Cow position:
               
chr18:52433546-52433994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 303
               

               
Conread position:
               
24-481
               

               
Cow position:
               
chr18:43120506-43120057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
432, 95
               

               
Conread position:
               
24-493
               

               
Cow position:
               
chr18:33064039-33063569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
24-504
               

               
Cow position:
               
chr18:44239733-44240218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
24-505
               

               
Cow position:
               
chr18:43167936-43168422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 235
               

               
Conread position:
               
24-505
               

               
Cow position:
               
chr18:52428113-52428599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 235
               

               
Conread position:
               
24-505
               

               
Cow position:
               
chr18:52428281-52428767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 68
               

               
Conread position:
               
24-505
               

               
Cow position:
               
chr18:52433210-52433696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 75
               

               
Conread position:
               
24-505
               

               
Cow position:
               
chr18:55008453-55008937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
235, 99
               

               
Conread position:
               
24-506
               

               
Cow position:
               
chr18:52427861-52428348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 78
               

               
Conread position:
               
24-517
               

               
Cow position:
               
chr18:52447336-52447834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 23
               

               
Conread position:
               
24-518
               

               
Cow position:
               
chr18:43168020-43168519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
431, 0
               

               
Conread position:
               
24-518
               

               
Cow position:
               
chr18:44184910-44184411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 155
               

               
Conread position:
               
24-524
               

               
Cow position:
               
chr18:41198139-41198645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
429, 0
               

               
Conread position:
               
24-524
               

               
Cow position:
               
chr18:56247837-56247339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 5
               

               
Conread position:
               
25-349
               

               
Cow position:
               
chr18:42724275-42723951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
83, 87
               

               
Conread position:
               
25-396
               

               
Cow position:
               
chr18:44397874-44397503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
25-418
               

               
Cow position:
               
chr18:53509299-53509692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 302
               

               
Conread position:
               
25-424
               

               
Cow position:
               
chr18:53525753-53526152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 302
               

               
Conread position:
               
25-427
               

               
Cow position:
               
chr18:53636067-53635665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
25-427
               

               
Cow position:
               
chr18:56128098-56128500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
229, 256
               

               
Conread position:
               
25-493
               

               
Cow position:
               
chr18:42790941-42791412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 90
               

               
Conread position:
               
25-510
               

               
Cow position:
               
chr18:44398126-44397636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 77
               

               
Conread position:
               
25-650
               

               
Cow position:
               
chr18:42675176-42674547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
431, 491
               

               
Conread position:
               
26-219
               

               
Cow position:
               
chr18:40307155-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
26-308
               

               
Cow position:
               
chr18:40075421-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
26-425
               

               
Cow position:
               
chr18:53610489-53610090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
244, 249
               

               
Conread position:
               
26-474
               

               
Cow position:
               
chr18:44398293-44397843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 70
               

               
Conread position:
               
26-503
               

               
Cow position:
               
chr18:40075001-40075483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
120, 112
               

               
Conread position:
               
26-504
               

               
Cow position:
               
chr18:42960483-42960006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
430, 138
               

               
Conread position:
               
26-505
               

               
Cow position:
               
chr18:44398209-44397725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 75
               

               
Conread position:
               
26-519
               

               
Cow position:
               
chr18:41197973-41198470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
428, 493
               

               
Conread position:
               
27-374
               

               
Cow position:
               
chr18:51765263-51764916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
27-425
               

               
Cow position:
               
chr18:55497643-55497245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
219, 245
               

               
Conread position:
               
27-426
               

               
Cow position:
               
chr18:51839246-51838847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 88
               

               
Conread position:
               
27-442
               

               
Cow position:
               
chr18:42959816-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
27-511
               

               
Cow position:
               
chr18:51765431-51764942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
67, 76
               

               
Conread position:
               
27-517
               

               
Cow position:
               
chr18:51400427-51400922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
28-242
               

               
Cow position:
               
chr18:51838993-51838779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
87, 68
               

               
Conread position:
               
28-355
               

               
Cow position:
               
chr18:50030751-50030420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 73
               

               
Conread position:
               
28-382
               

               
Cow position:
               
chr18:40306989-40307343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
60, 68
               

               
Conread position:
               
28-452
               

               
Cow position:
               
chr18:53560074-53560498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 244
               

               
Conread position:
               
28-517
               

               
Cow position:
               
chr18:50848483-50848977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 60
               

               
Conread position:
               
28-518
               

               
Cow position:
               
chr18:51765766-51765271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
351, 344
               

               
Conread position:
               
28-522
               

               
Cow position:
               
chr18:33093042-33092543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
408, 398
               

               
Conread position:
               
28-526
               

               
Cow position:
               
chr18:52446920-52447424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 152
               

               
Conread position:
               
29-307
               

               
Cow position:
               
chr18:50282075-50282353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 84
               

               
Conread position:
               
29-333
               

               
Cow position:
               
chr18:42792625-42792929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
73, 82
               

               
Conread position:
               
29-339
               

               
Cow position:
               
chr18:42827637-42827952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
65, 71
               

               
Conread position:
               
29-346
               

               
Cow position:
               
chr18:50083935-50084252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 85
               

               
Conread position:
               
29-399
               

               
Cow position:
               
chr18:55523961-55524331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
29-403
               

               
Cow position:
               
chr18:56248176-56247810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
298, 12
               

               
Conread position:
               
29-415
               

               
Cow position:
               
chr18:49021716-49022103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
369, 0
               

               
Conread position:
               
29-418
               

               
Cow position:
               
chr18:54992801-54993190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
243, 223
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:1417815-1418210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
145, 155
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:54967184-54967579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 168
               

               
Conread position:
               
29-425
               

               
Cow position:
               
chr18:50099880-50100276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
238, 230
               

               
Conread position:
               
29-425
               

               
Cow position:
               
chr18:50295421-50295817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 73
               

               
Conread position:
               
29-426
               

               
Cow position:
               
chr18:50022338-50021938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
80, 63
               

               
Conread position:
               
29-426
               

               
Cow position:
               
chr18:50083767-50084164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 80
               

               
Conread position:
               
29-426
               

               
Cow position:
               
chr18:54967016-54967413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
164, 156
               

               
Conread position:
               
29-426
               

               
Cow position:
               
chr18:56329702-56329305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 77
               

               
Conread position:
               
29-430
               

               
Cow position:
               
chr18:50251148-50251549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
66, 80
               

               
Conread position:
               
29-446
               

               
Cow position:
               
chr18:50048654-50048243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
65, 86
               

               
Conread position:
               
29-451
               

               
Cow position:
               
chr18:56434446-56434867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
176, 172
               

               
Conread position:
               
29-453
               

               
Cow position:
               
chr18:55018113-55018537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 232
               

               
Conread position:
               
29-454
               

               
Cow position:
               
chr18:50848736-50849161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 46
               

               
Conread position:
               
29-454
               

               
Cow position:
               
chr18:55008792-55009217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 85
               

               
Conread position:
               
29-454
               

               
Cow position:
               
chr18:56330038-56329613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 77
               

               
Conread position:
               
29-457
               

               
Cow position:
               
chr18:49021632-49022060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
60, 68
               

               
Conread position:
               
29-457
               

               
Cow position:
               
chr18:53498541-53498970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
287, 345
               

               
Conread position:
               
29-473
               

               
Cow position:
               
chr18:42791281-42791727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
29-473
               

               
Cow position:
               
chr18:42792121-42792567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
29-474
               

               
Cow position:
               
chr18:42791701-42792148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 76
               

               
Conread position:
               
29-474
               

               
Cow position:
               
chr18:50099712-50100159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
62, 77
               

               
Conread position:
               
29-489
               

               
Cow position:
               
chr18:50251067-50251527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
294, 66
               

               
Conread position:
               
29-493
               

               
Cow position:
               
chr18:44239990-44240457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 78
               

               
Conread position:
               
29-493
               

               
Cow position:
               
chr18:51812651-51812184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
427, 0
               

               
Conread position:
               
29-497
               

               
Cow position:
               
chr18:1417899-1418371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 67
               

               
Conread position:
               
29-497
               

               
Cow position:
               
chr18:41197640-41198112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 71
               

               
Conread position:
               
29-497
               

               
Cow position:
               
chr18:50059642-50059170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 71
               

               
Conread position:
               
29-499
               

               
Cow position:
               
chr18:43120669-43120211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
163, 146
               

               
Conread position:
               
29-503
               

               
Cow position:
               
chr18:50083683-50084162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 86
               

               
Conread position:
               
29-503
               

               
Cow position:
               
chr18:50246058-50246537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
152, 158
               

               
Conread position:
               
29-503
               

               
Cow position:
               
chr18:50848148-50848627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
147, 156
               

               
Conread position:
               
29-504
               

               
Cow position:
               
chr18:41198060-41198540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 230
               

               
Conread position:
               
29-505
               

               
Cow position:
               
chr18:22634539-22635018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
29-505
               

               
Cow position:
               
chr18:43022586-43022105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 64
               

               
Conread position:
               
29-505
               

               
Cow position:
               
chr18:44240242-44240723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 78
               

               
Conread position:
               
29-505
               

               
Cow position:
               
chr18:51368705-51368224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
103, 66
               

               
Conread position:
               
29-506
               

               
Cow position:
               
chr18:50246394-50246873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 80
               

               
Conread position:
               
29-516
               

               
Cow position:
               
chr18:43093521-43093029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 398
               

               
Conread position:
               
29-516
               

               
Cow position:
               
chr18:43120174-43119682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
428, 0
               

               
Conread position:
               
29-517
               

               
Cow position:
               
chr18:52447509-52448002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 73
               

               
Conread position:
               
29-518
               

               
Cow position:
               
chr18:41197892-41198386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
29-518
               

               
Cow position:
               
chr18:42791533-42792027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 226
               

               
Conread position:
               
29-518
               

               
Cow position:
               
chr18:42827385-42827879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 71
               

               
Conread position:
               
29-518
               

               
Cow position:
               
chr18:51367782-51367288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 80
               

               
Conread position:
               
29-521
               

               
Cow position:
               
chr18:50848904-50849401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
29-521
               

               
Cow position:
               
chr18:51367949-51367453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 140
               

               
Conread position:
               
29-521
               

               
Cow position:
               
chr18:51789492-51788995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
426, 0
               

               
Conread position:
               
29-522
               

               
Cow position:
               
chr18:33064621-33064123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 326
               

               
Conread position:
               
29-524
               

               
Cow position:
               
chr18:43022838-43022337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 80
               

               
Conread position:
               
29-621
               

               
Cow position:
               
chr18:44253335-44252750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 230
               

               
Conread position:
               
29-650
               

               
Cow position:
               
chr18:42960150-42959534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 322
               

               
Conread position:
               
30-225
               

               
Cow position:
               
chr18:50282160-50282355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 85
               

               
Conread position:
               
30-260
               

               
Cow position:
               
chr18:51969816-51970046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
30-278
               

               
Cow position:
               
chr18:51812146-51811898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
30-279
               

               
Cow position:
               
chr18:51874458-51874707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
238, 229
               

               
Conread position:
               
30-295
               

               
Cow position:
               
chr18:22634958-22635223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 79
               

               
Conread position:
               
30-295
               

               
Cow position:
               
chr18:42674667-42674402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
30-298
               

               
Cow position:
               
chr18:49023048-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 67
               

               
Conread position:
               
30-301
               

               
Cow position:
               
chr18:56434699-56434970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
134, 55
               

               
Conread position:
               
30-321
               

               
Cow position:
               
chr18:55524046-55524337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
30-335
               

               
Cow position:
               
chr18:51969741-51970037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
30-360
               

               
Cow position:
               
chr18:51874374-51874704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
30-384
               

               
Cow position:
               
chr18:55066708-55066354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
313, 319
               

               
Conread position:
               
30-385
               

               
Cow position:
               
chr18:42837450-42837095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
30-394
               

               
Cow position:
               
chr18:50271779-50272143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
30-397
               

               
Cow position:
               
chr18:56316367-56316734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
252, 248
               

               
Conread position:
               
30-398
               

               
Cow position:
               
chr18:42827554-42827922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
30-400
               

               
Cow position:
               
chr18:14453222-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
30-400
               

               
Cow position:
               
chr18:33092872-33092502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 230
               

               
Conread position:
               
30-402
               

               
Cow position:
               
chr18:51838720-51838353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
234, 130
               

               
Conread position:
               
30-402
               

               
Cow position:
               
chr18:51969657-51970020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 150
               

               
Conread position:
               
30-403
               

               
Cow position:
               
chr18:51400850-51401223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 157
               

               
Conread position:
               
30-412
               

               
Cow position:
               
chr18:56434111-56434493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
217, 231
               

               
Conread position:
               
30-417
               

               
Cow position:
               
chr18:53525926-53526313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 158
               

               
Conread position:
               
30-418
               

               
Cow position:
               
chr18:53509472-53509860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 158
               

               
Conread position:
               
30-418
               

               
Cow position:
               
chr18:54992634-54993022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
164, 156
               

               
Conread position:
               
30-418
               

               
Cow position:
               
chr18:54993054-54993442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
151, 147
               

               
Conread position:
               
30-418
               

               
Cow position:
               
chr18:55523542-55523930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
67, 76
               

               
Conread position:
               
30-418
               

               
Cow position:
               
chr18:56434279-56434667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
74, 83
               

               
Conread position:
               
30-421
               

               
Cow position:
               
chr18:50281740-50282131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
66, 77
               

               
Conread position:
               
30-424
               

               
Cow position:
               
chr18:33064704-33064310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 80
               

               
Conread position:
               
30-424
               

               
Cow position:
               
chr18:50849073-50849468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
306, 316
               

               
Conread position:
               
30-424
               

               
Cow position:
               
chr18:51765932-51765538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
30-424
               

               
Cow position:
               
chr18:55067044-55066650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
30-424
               

               
Cow position:
               
chr18:56128187-56128581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 244
               

               
Conread position:
               
30-425
               

               
Cow position:
               
chr18:22634790-22635184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
64, 90
               

               
Conread position:
               
30-425
               

               
Cow position:
               
chr18:53598324-53597937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
145, 31
               

               
Conread position:
               
30-425
               

               
Cow position:
               
chr18:56316115-56316510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 304
               

               
Conread position:
               
30-426
               

               
Cow position:
               
chr18:50022508-50022109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
74, 83
               

               
Conread position:
               
30-426
               

               
Cow position:
               
chr18:50083516-50083912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 298
               

               
Conread position:
               
30-426
               

               
Cow position:
               
chr18:50083600-50083996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 224
               

               
Conread position:
               
30-426
               

               
Cow position:
               
chr18:50271443-50271839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
144, 158
               

               
Conread position:
               
30-426
               

               
Cow position:
               
chr18:50281908-50282304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
64, 85
               

               
Conread position:
               
30-426
               

               
Cow position:
               
chr18:50848233-50848629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 96
               

               
Conread position:
               
30-426
               

               
Cow position:
               
chr18:56329533-56329137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
30-427
               

               
Cow position:
               
chr18:53610317-53609920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
232, 228
               

               
Conread position:
               
30-427
               

               
Cow position:
               
chr18:54967353-54967746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
334, 0
               

               
Conread position:
               
30-428
               

               
Cow position:
               
chr18:51969575-51969962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 39
               

               
Conread position:
               
30-438
               

               
Cow position:
               
chr18:50059389-50058981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 243
               

               
Conread position:
               
30-442
               

               
Cow position:
               
chr18:51812314-51811904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
237, 224
               

               
Conread position:
               
30-451
               

               
Cow position:
               
chr18:56434195-56434616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
133, 152
               

               
Conread position:
               
30-452
               

               
Cow position:
               
chr18:53587017-53586595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 147
               

               
Conread position:
               
30-453
               

               
Cow position:
               
chr18:55008961-55009382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
30-454
               

               
Cow position:
               
chr18:42792458-42792882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 297
               

               
Conread position:
               
30-454
               

               
Cow position:
               
chr18:50021830-50021403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
64, 70
               

               
Conread position:
               
30-454
               

               
Cow position:
               
chr18:50059221-50058797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 239
               

               
Conread position:
               
30-454
               

               
Cow position:
               
chr18:50848989-50849413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 225
               

               
Conread position:
               
30-454
               

               
Cow position:
               
chr18:53559824-53560248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
85, 73
               

               
Conread position:
               
30-454
               

               
Cow position:
               
chr18:54968104-54968528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
151, 138
               

               
Conread position:
               
30-454
               

               
Cow position:
               
chr18:55066960-55066536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 249
               

               
Conread position:
               
30-454
               

               
Cow position:
               
chr18:56329617-56329193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
398, 407
               

               
Conread position:
               
30-456
               

               
Cow position:
               
chr18:50059725-50059299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
30-456
               

               
Cow position:
               
chr18:51368200-51367775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 70
               

               
Conread position:
               
30-456
               

               
Cow position:
               
chr18:53610149-53609723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 69
               

               
Conread position:
               
30-457
               

               
Cow position:
               
chr18:49032560-49032133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
30-457
               

               
Cow position:
               
chr18:56247498-56247078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
30-458
               

               
Cow position:
               
chr18:55523710-55524138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
159, 140
               

               
Conread position:
               
30-469
               

               
Cow position:
               
chr18:53586933-53586492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 155
               

               
Conread position:
               
30-470
               

               
Cow position:
               
chr18:54980298-54980737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
300, 272
               

               
Conread position:
               
30-473
               

               
Cow position:
               
chr18:44153720-44153289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 50
               

               
Conread position:
               
30-473
               

               
Cow position:
               
chr18:49033064-49032619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
30-474
               

               
Cow position:
               
chr18:33064284-33063838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 231
               

               
Conread position:
               
30-474
               

               
Cow position:
               
chr18:42791870-42792316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 81
               

               
Conread position:
               
30-474
               

               
Cow position:
               
chr18:51368284-51367838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
428, 0
               

               
Conread position:
               
30-474
               

               
Cow position:
               
chr18:52447930-52448377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 71
               

               
Conread position:
               
30-476
               

               
Cow position:
               
chr18:51874129-51874569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 30
               

               
Conread position:
               
30-493
               

               
Cow position:
               
chr18:40074921-40075387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 192
               

               
Conread position:
               
30-493
               

               
Cow position:
               
chr18:43167774-43168240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
428, 0
               

               
Conread position:
               
30-493
               

               
Cow position:
               
chr18:51752185-51751717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
427, 0
               

               
Conread position:
               
30-496
               

               
Cow position:
               
chr18:50022085-50021610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
30-497
               

               
Cow position:
               
chr18:43093685-43093217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
424, 13
               

               
Conread position:
               
30-505
               

               
Cow position:
               
chr18:49032896-49032416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
428, 0
               

               
Conread position:
               
30-505
               

               
Cow position:
               
chr18:52428035-52428515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 62
               

               
Conread position:
               
30-505
               

               
Cow position:
               
chr18:52433468-52433948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 62
               

               
Conread position:
               
30-507
               

               
Cow position:
               
chr18:51789323-51788841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
30-509
               

               
Cow position:
               
chr18:54979962-54980445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
30-511
               

               
Cow position:
               
chr18:53559740-53560226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
217, 235
               

               
Conread position:
               
30-511
               

               
Cow position:
               
chr18:55523794-55524280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
151, 146
               

               
Conread position:
               
30-515
               

               
Cow position:
               
chr18:56315944-56316437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
30-516
               

               
Cow position:
               
chr18:44253825-44253335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
426, 0
               

               
Conread position:
               
30-516
               

               
Cow position:
               
chr18:49032812-49032321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
426, 0
               

               
Conread position:
               
30-516
               

               
Cow position:
               
chr18:56329953-56329462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
425, 0
               

               
Conread position:
               
30-517
               

               
Cow position:
               
chr18:42791786-42792278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
30-517
               

               
Cow position:
               
chr18:51400598-51401090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 81
               

               
Conread position:
               
30-517
               

               
Cow position:
               
chr18:55018282-55018775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
66, 77
               

               
Conread position:
               
30-521
               

               
Cow position:
               
chr18:42791198-42791694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 225
               

               
Conread position:
               
30-521
               

               
Cow position:
               
chr18:42792290-42792786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
426, 0
               

               
Conread position:
               
30-521
               

               
Cow position:
               
chr18:50848653-50849149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
30-521
               

               
Cow position:
               
chr18:51368536-51368040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 306
               

               
Conread position:
               
30-521
               

               
Cow position:
               
chr18:51789071-51788580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
237, 224
               

               
Conread position:
               
30-522
               

               
Cow position:
               
chr18:33064452-33063955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 157
               

               
Conread position:
               
30-527
               

               
Cow position:
               
chr18:33064116-33063613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 78
               

               
Conread position:
               
30-529
               

               
Cow position:
               
chr18:51789575-51789072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
428, 498
               

               
Conread position:
               
30-535
               

               
Cow position:
               
chr18:51765596-51765087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
77, 72
               

               
Conread position:
               
30-535
               

               
Cow position:
               
chr18:51812566-51812057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
30-544
               

               
Cow position:
               
chr18:51969323-51969840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
424, 291
               

               
Conread position:
               
30-706
               

               
Cow position:
               
chr18:42675255-42674570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 63
               

               
Conread position:
               
30-706
               

               
Cow position:
               
chr18:55017778-55018463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
228, 242
               

               
Conread position:
               
31-419
               

               
Cow position:
               
chr18:55008376-55008762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
316, 176
               

               
Conread position:
               
31-424
               

               
Cow position:
               
chr18:56434532-56434925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
61, 69
               

               
Conread position:
               
31-503
               

               
Cow position:
               
chr18:50059556-50059079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 229
               

               
Conread position:
               
31-505
               

               
Cow position:
               
chr18:52427532-52428011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 69
               

               
Conread position:
               
31-516
               

               
Cow position:
               
chr18:14454037-14453547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
31-518
               

               
Cow position:
               
chr18:52432881-52433373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 69
               

               
Conread position:
               
31-713
               

               
Cow position:
               
chr18:42985577-42984886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 232
               

               
Conread position:
               
32-526
               

               
Cow position:
               
chr18:44154470-44153968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 149
               

               
Conread position:
               
33-451
               

               
Cow position:
               
chr18:42694063-42693645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
82, 77
               

               
Conread position:
               
33-454
               

               
Cow position:
               
chr18:42693811-42693390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
33-454
               

               
Cow position:
               
chr18:53509224-53509644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 7
               

               
Conread position:
               
33-454
               

               
Cow position:
               
chr18:53525678-53526098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
57, 7
               

               
Conread position:
               
33-525
               

               
Cow position:
               
chr18:43175698-43175209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 98
               

               
Conread position:
               
34-424
               

               
Cow position:
               
chr18:50030831-50030436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
30, 83
               

               
Conread position:
               
34-454
               

               
Cow position:
               
chr18:49022800-49023220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
385, 401
               

               
Conread position:
               
34-505
               

               
Cow position:
               
chr18:44398453-44397977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 26
               

               
Conread position:
               
34-650
               

               
Cow position:
               
chr18:42675502-42674883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
422, 12
               

               
Conread position:
               
35-380
               

               
Cow position:
               
chr18:22634879-22635224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
212, 238
               

               
Conread position:
               
35-504
               

               
Cow position:
               
chr18:50058964-50058492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 323
               

               
Conread position:
               
35-1031
               

               
Cow position:
               
chr18:43048741-43047740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1025
               

               
Alignm identity:
               
843
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
443, 662
               

               
Conread position:
               
36-339
               

               
Cow position:
               
chr18:51873689-51873991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
36-424
               

               
Cow position:
               
chr18:40086948-40086564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
36-493
               

               
Cow position:
               
chr18:51766093-51765634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
409, 15
               

               
Conread position:
               
36-497
               

               
Cow position:
               
chr18:33093118-33092653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 295
               

               
Conread position:
               
36-505
               

               
Cow position:
               
chr18:43167612-43168086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
132, 140
               

               
Conread position:
               
37-402
               

               
Cow position:
               
chr18:43094088-43093724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 58
               

               
Conread position:
               
38-474
               

               
Cow position:
               
chr18:43094004-43093578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 57
               

               
Conread position:
               
38-505
               

               
Cow position:
               
chr18:54967109-54967581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
408, 436
               

               
Conread position:
               
38-526
               

               
Cow position:
               
chr18:51812894-51812400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 401
               

               
Conread position:
               
39-425
               

               
Cow position:
               
chr18:55497547-55497161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
154, 147
               

               
Conread position:
               
39-515
               

               
Cow position:
               
chr18:53635549-53635068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 147
               

               
Conread position:
               
39-515
               

               
Cow position:
               
chr18:56128616-56129097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
415, 0
               

               
Conread position:
               
39-516
               

               
Cow position:
               
chr18:53610224-53609742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 136
               

               
Conread position:
               
39-526
               

               
Cow position:
               
chr18:56494003-56494496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 233
               

               
Conread position:
               
40-418
               

               
Cow position:
               
chr18:54967696-54968072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
40-419
               

               
Cow position:
               
chr18:54980056-54980435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
40-518
               

               
Cow position:
               
chr18:54993400-54993879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 219
               

               
Conread position:
               
41-425
               

               
Cow position:
               
chr18:55523301-55523685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
206, 231
               

               
Conread position:
               
41-505
               

               
Cow position:
               
chr18:53497965-53498437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
316, 55
               

               
Conread position:
               
41-519
               

               
Cow position:
               
chr18:50848328-50848811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
53, 74
               

               
Conread position:
               
42-307
               

               
Cow position:
               
chr18:42693215-42692949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
42-330
               

               
Cow position:
               
chr18:42724594-42724306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
158, 144
               

               
Conread position:
               
42-426
               

               
Cow position:
               
chr18:56329437-56329053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 220
               

               
Conread position:
               
42-473
               

               
Cow position:
               
chr18:55067116-55066683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
137, 144
               

               
Conread position:
               
42-496
               

               
Cow position:
               
chr18:51752340-51751884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
43-429
               

               
Cow position:
               
chr18:56493839-56494225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
46-424
               

               
Cow position:
               
chr18:56316047-56316424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
59, 68
               

               
Conread position:
               
48-393
               

               
Cow position:
               
chr18:51838786-51838443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
212, 0
               

               
Conread position:
               
49-396
               

               
Cow position:
               
chr18:49022229-49022576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
255, 249
               

               
Conread position:
               
51-317
               

               
Cow position:
               
chr18:43053456-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
51-425
               

               
Cow position:
               
chr18:56330184-56329810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
223, 207
               

               
Conread position:
               
51-497
               

               
Cow position:
               
chr18:50250922-50251368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
142, 63
               

               
Conread position:
               
51-516
               

               
Cow position:
               
chr18:40324881-40324411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
404, 0
               

               
Conread position:
               
52-419
               

               
Cow position:
               
chr18:49033378-49033011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
52-426
               

               
Cow position:
               
chr18:50281678-50282052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
129, 120
               

               
Conread position:
               
52-505
               

               
Cow position:
               
chr18:43167712-43168170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 58
               

               
Conread position:
               
53-418
               

               
Cow position:
               
chr18:50021720-50021357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
54-423
               

               
Cow position:
               
chr18:50295362-50295731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
127, 134
               

               
Conread position:
               
54-425
               

               
Cow position:
               
chr18:50083288-50083659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
267, 274
               

               
Conread position:
               
54-451
               

               
Cow position:
               
chr18:40306175-40306572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
55-503
               

               
Cow position:
               
chr18:51813046-51812592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
57-425
               

               
Cow position:
               
chr18:53610542-53610174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
57-504
               

               
Cow position:
               
chr18:41197500-41197952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 53
               

               
Conread position:
               
59-426
               

               
Cow position:
               
chr18:55497695-55497328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
201, 213
               

               
Conread position:
               
61-460
               

               
Cow position:
               
chr18:50295201-50295601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
64-425
               

               
Cow position:
               
chr18:53636112-53635751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 46
               

               
Conread position:
               
64-425
               

               
Cow position:
               
chr18:56128053-56128414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
31, 46
               

               
Conread position:
               
64-497
               

               
Cow position:
               
chr18:50098907-50099344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
184, 209
               

               
Conread position:
               
64-505
               

               
Cow position:
               
chr18:43175592-43175146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 269
               

               
Conread position:
               
64-505
               

               
Cow position:
               
chr18:51969039-51969467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
302, 195
               

               
Conread position:
               
64-516
               

               
Cow position:
               
chr18:51839545-51839088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
386, 377
               

               
Conread position:
               
66-521
               

               
Cow position:
               
chr18:53559692-53560152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
181, 206
               

               
Conread position:
               
72-339
               

               
Cow position:
               
chr18:55075112-55075380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
167, 236
               

               
Conread position:
               
72-394
               

               
Cow position:
               
chr18:49021090-49021415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
142, 185
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr18:51766137-51765790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
74-516
               

               
Cow position:
               
chr18:51789948-51789504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
173, 51
               

               
Conread position:
               
75-454
               

               
Cow position:
               
chr18:51400307-51400686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
98-650
               

               
Cow position:
               
chr18:44154489-44153930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 439
               

               
Conread position:
               
99-454
               

               
Cow position:
               
chr18:33065140-33064784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
99-516
               

               
Cow position:
               
chr18:42790847-42791269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
167, 153
               

               
Conread position:
               
101-505
               

               
Cow position:
               
chr18:43094187-43093784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
106, 26
               

               
Conread position:
               
104-719
               

               
Cow position:
               
chr18:40086964-40086339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 73
               

               
Conread position:
               
105-340
               

               
Cow position:
               
chr18:40087412-40087177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 124
               

               
Conread position:
               
106-505
               

               
Cow position:
               
chr18:42985586-42985182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 235
               

               
Conread position:
               
106-505
               

               
Cow position:
               
chr18:44184912-44184508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 241
               

               
Conread position:
               
106-505
               

               
Cow position:
               
chr18:44239731-44240135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 0
               

               
Conread position:
               
107-454
               

               
Cow position:
               
chr18:50059732-50059385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
142, 162
               

               
Conread position:
               
108-516
               

               
Cow position:
               
chr18:51813073-51812663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
348, 17
               

               
Conread position:
               
109-503
               

               
Cow position:
               
chr18:42790941-42791340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 150
               

               
Conread position:
               
111-451
               

               
Cow position:
               
chr18:49021630-49021970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-497
               

               
Cow position:
               
chr18:50271441-50271830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
137, 160
               

               
Conread position:
               
114-431
               

               
Cow position:
               
chr18:56330205-56329888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 145
               

               
Conread position:
               
114-503
               

               
Cow position:
               
chr18:51874045-51874432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
342, 114
               

               
Conread position:
               
115-426
               

               
Cow position:
               
chr18:42694065-42693753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
136, 146
               

               
Conread position:
               
116-426
               

               
Cow position:
               
chr18:49033398-49033088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
117-426
               

               
Cow position:
               
chr18:50031081-50030774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
233, 141
               

               
Conread position:
               
117-474
               

               
Cow position:
               
chr18:42960557-42960207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
349, 57
               

               
Conread position:
               
118-454
               

               
Cow position:
               
chr18:1417820-1418156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
140, 146
               

               
Conread position:
               
119-493
               

               
Cow position:
               
chr18:40324980-40324609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
7, 98
               

               
Conread position:
               
123-424
               

               
Cow position:
               
chr18:56128028-56128329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
143, 132
               

               
Conread position:
               
123-426
               

               
Cow position:
               
chr18:53636137-53635834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
123-456
               

               
Cow position:
               
chr18:56248245-56247919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
124-515
               

               
Cow position:
               
chr18:40306161-40306557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
334, 0
               

               
Conread position:
               
126-515
               

               
Cow position:
               
chr18:51400274-51400668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
253, 246
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr18:50250839-50251209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
227, 49
               

               
Conread position:
               
135-401
               

               
Cow position:
               
chr18:43053456-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
138-474
               

               
Cow position:
               
chr18:50083288-50083626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
120, 136
               

               
Conread position:
               
171-511
               

               
Cow position:
               
chr18:44254100-44253758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 89
               

               
Conread position:
               
183-457
               

               
Cow position:
               
chr18:50271428-50271702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
163, 173
               

               
Conread position:
               
189-505
               

               
Cow position:
               
chr18:44184913-44184592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 168
               

               
Conread position:
               
189-511
               

               
Cow position:
               
chr18:42985587-42985259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 0
               

               
Conread position:
               
189-518
               

               
Cow position:
               
chr18:42837963-42837629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
269, 0
               

               
Conread position:
               
192-497
               

               
Cow position:
               
chr18:50049251-50048938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
55, 168
               

               
Conread position:
               
192-503
               

               
Cow position:
               
chr18:44398463-44398147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
194-516
               

               
Cow position:
               
chr18:14454042-14453715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
179, 160
               

               
Conread position:
               
200-454
               

               
Cow position:
               
chr18:33093122-33092868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
210-424
               

               
Cow position:
               
chr18:51969018-51969231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
218-474
               

               
Cow position:
               
chr18:43053457-43053199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
238, 0
               

               
Conread position:
               
265-505
               

               
Cow position:
               
chr18:44184921-44184676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
102, 98
               

               
Conread position:
               
266-456
               

               
Cow position:
               
chr18:40086970-40086780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
89, 75
               

               
Conread position:
               
272-454
               

               
Cow position:
               
chr18:53636072-53635890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
51, 56
               

               
Conread position:
               
273-474
               

               
Cow position:
               
chr18:44239730-44239933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
164, 142
               

               
Conread position:
               
273-503
               

               
Cow position:
               
chr18:41949375-41949140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
282-517
               

               
Cow position:
               
chr18:44254073-44253837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 73
               
Show alignments to all cow chromosomes.