Cow genome map
Conread name: | Ss1.1-Pig4-TMW8036I23.3 |
Conread position: | 1-228 |
Cow position: | chr19:23597486-23597713 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 158 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-307 |
Cow position: | chr19:23614813-23615117 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 212 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 292, 0 |
Conread position: | 1-314 |
Cow position: | chr19:20635260-20634950 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 206 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 277, 0 |
Conread position: | 1-373 |
Cow position: | chr19:14940697-14941069 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 26 |
Conread position: | 1-425 |
Cow position: | chr19:14959852-14959444 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 14 |
Conread position: | 1-427 |
Cow position: | chr19:20677568-20677994 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 321, 326 |
Conread position: | 1-429 |
Cow position: | chr19:20677736-20678164 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 109 |
Conread position: | 1-474 |
Cow position: | chr19:23613973-23614448 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 263, 254 |
Conread position: | 1-493 |
Cow position: | chr19:14940361-14940856 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 24 |
Conread position: | 1-493 |
Cow position: | chr19:23613805-23614300 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 455, 0 |
Conread position: | 1-497 |
Cow position: | chr19:23614477-23614977 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 267, 260 |
Conread position: | 1-507 |
Cow position: | chr19:20678240-20678748 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 452, 494 |
Conread position: | 1-516 |
Cow position: | chr19:20677904-20678424 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 14 |
Conread position: | 1-537 |
Cow position: | chr19:43570187-43569651 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 101 |
Conread position: | 2-454 |
Cow position: | chr19:14960269-14959819 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 341, 104 |
Conread position: | 2-516 |
Cow position: | chr19:23597151-23597670 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 359, 352 |
Conread position: | 3-296 |
Cow position: | chr19:14940783-14941076 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 196 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-497 |
Cow position: | chr19:23613723-23614221 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 363, 352 |
Conread position: | 9-456 |
Cow position: | chr19:23614653-23615100 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 96 |
Conread position: | 13-309 |
Cow position: | chr19:14959115-14958819 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 203 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 265, 248 |
Conread position: | 13-385 |
Cow position: | chr19:14959193-14958827 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 346, 74 |
Conread position: | 13-454 |
Cow position: | chr19:14960174-14959737 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 312, 21 |
Conread position: | 13-474 |
Cow position: | chr19:14960342-14959881 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 443, 188 |
Conread position: | 13-496 |
Cow position: | chr19:14940457-14940943 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 314 |
Conread position: | 14-402 |
Cow position: | chr19:23649940-23650328 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 11 |
Conread position: | 15-351 |
Cow position: | chr19:14948332-14947996 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 15-473 |
Cow position: | chr19:14940543-14941003 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 86 |
Conread position: | 16-303 |
Cow position: | chr19:23650194-23650481 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 231, 245 |
Conread position: | 16-518 |
Cow position: | chr19:23649522-23650029 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 88 |
Conread position: | 17-503 |
Cow position: | chr19:14940042-14940533 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 438, 7 |
Conread position: | 17-505 |
Cow position: | chr19:23614578-23615070 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 438, 7 |
Conread position: | 18-426 |
Cow position: | chr19:23650028-23650436 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 91 |
Conread position: | 18-583 |
Cow position: | chr19:23614074-23614642 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 440, 510 |
Conread position: | 19-314 |
Cow position: | chr19:20678510-20678802 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 203 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 96, 79 |
Conread position: | 19-392 |
Cow position: | chr19:23650113-23650486 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 19-493 |
Cow position: | chr19:23649861-23650338 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 437, 0 |
Conread position: | 19-497 |
Cow position: | chr19:23614327-23614809 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 328, 319 |
Conread position: | 22-256 |
Cow position: | chr19:14916188-14916419 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 161 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 110, 38 |
Conread position: | 22-456 |
Cow position: | chr19:23597255-23597689 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-527 |
Cow position: | chr19:23649444-23649955 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 434, 0 |
Conread position: | 22-650 |
Cow position: | chr19:23613406-23614038 (view UCSC Genome Browser custom track) |
Alignm length: | 636 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 434, 506 |
Conread position: | 24-493 |
Cow position: | chr19:43570322-43569860 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 300, 45 |
Conread position: | 24-516 |
Cow position: | chr19:14960415-14959920 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 242, 230 |
Conread position: | 26-307 |
Cow position: | chr19:14959591-14959310 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 89 |
Conread position: | 26-516 |
Cow position: | chr19:23596926-23597418 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 109 |
Conread position: | 28-466 |
Cow position: | chr19:14940640-14941078 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 81 |
Conread position: | 29-393 |
Cow position: | chr19:14959670-14959308 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 334, 19 |
Conread position: | 29-396 |
Cow position: | chr19:23597346-23597713 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 83 |
Conread position: | 29-402 |
Cow position: | chr19:20635400-20635027 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 153 |
Conread position: | 29-410 |
Cow position: | chr19:23614757-23615136 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 320, 312 |
Conread position: | 29-424 |
Cow position: | chr19:20678100-20678495 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 344, 336 |
Conread position: | 29-426 |
Cow position: | chr19:23614421-23614818 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 29-428 |
Cow position: | chr19:14916028-14916422 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 270 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 53, 68 |
Conread position: | 29-505 |
Cow position: | chr19:14940305-14940786 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 227 |
Conread position: | 29-505 |
Cow position: | chr19:23614253-23614734 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 429, 0 |
Conread position: | 30-380 |
Cow position: | chr19:14948401-14948051 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 30-426 |
Cow position: | chr19:20635483-20635087 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 64 |
Conread position: | 30-454 |
Cow position: | chr19:14959419-14959010 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 72 |
Conread position: | 30-456 |
Cow position: | chr19:14948484-14948059 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 334, 80 |
Conread position: | 30-474 |
Cow position: | chr19:43570242-43569796 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 426, 0 |
Conread position: | 30-487 |
Cow position: | chr19:23597095-23597555 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 427, 0 |
Conread position: | 30-493 |
Cow position: | chr19:20677513-20677979 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 147 |
Conread position: | 30-496 |
Cow position: | chr19:23613918-23614387 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 428, 0 |
Conread position: | 30-505 |
Cow position: | chr19:14940222-14940702 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 422, 0 |
Conread position: | 30-505 |
Cow position: | chr19:23613666-23614146 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 428, 0 |
Conread position: | 30-505 |
Cow position: | chr19:23649704-23650184 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 244 |
Conread position: | 30-527 |
Cow position: | chr19:23649788-23650291 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 428, 0 |
Conread position: | 33-457 |
Cow position: | chr19:14959257-14958839 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 288, 138 |
Conread position: | 35-493 |
Cow position: | chr19:23649289-23649750 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 80 |
Conread position: | 35-504 |
Cow position: | chr19:20678022-20678496 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 143 |
Conread position: | 35-504 |
Cow position: | chr19:20678190-20678664 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 141 |
Conread position: | 35-505 |
Cow position: | chr19:20635646-20635171 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 0 |
Conread position: | 41-322 |
Cow position: | chr19:20635304-20635023 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 194 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 41-554 |
Cow position: | chr19:14915955-14916470 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 327 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 59, 16 |
Conread position: | 41-650 |
Cow position: | chr19:20677440-20678053 (view UCSC Genome Browser custom track) |
Alignm length: | 620 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 137 |
Conread position: | 46-418 |
Cow position: | chr19:20636118-20635755 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 228 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 48-516 |
Cow position: | chr19:14939988-14940461 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 207 |
Conread position: | 51-525 |
Cow position: | chr19:23649389-23649869 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 405, 0 |
Conread position: | 51-589 |
Cow position: | chr19:23613351-23613891 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 405, 474 |
Conread position: | 52-515 |
Cow position: | chr19:23596868-23597333 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 296 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 405, 165 |
Conread position: | 72-474 |
Cow position: | chr19:14959711-14959309 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 60 |
Conread position: | 107-529 |
Cow position: | chr19:14915857-14916278 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 268 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 42, 58 |
Conread position: | 114-426 |
Cow position: | chr19:23649284-23649596 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 193 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 114-505 |
Cow position: | chr19:20635735-20635339 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 248 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 338, 0 |
Conread position: | 130-518 |
Cow position: | chr19:14960477-14960086 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 345, 0 |
Conread position: | 133-706 |
Cow position: | chr19:14939987-14940571 (view UCSC Genome Browser custom track) |
Alignm length: | 590 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 404 |
Conread position: | 142-505 |
Cow position: | chr19:20677373-20677741 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 230 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 232, 212 |
Conread position: | 145-516 |
Cow position: | chr19:43570452-43570087 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 244 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 30, 43 |
Conread position: | 218-505 |
Cow position: | chr19:23613350-23613642 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 202 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 238, 0 |
Show alignments to all cow chromosomes.