Cow genome map

Conread name: Ss1.1-Pig4-TMW8036I23.3

Conread position: 1-228
Cow position: chr19:23597486-23597713 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-307
Cow position: chr19:23614813-23615117 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 292, 0

Conread position: 1-314
Cow position: chr19:20635260-20634950 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 277, 0

Conread position: 1-373
Cow position: chr19:14940697-14941069 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 26

Conread position: 1-425
Cow position: chr19:14959852-14959444 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 14

Conread position: 1-427
Cow position: chr19:20677568-20677994 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 326

Conread position: 1-429
Cow position: chr19:20677736-20678164 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 109

Conread position: 1-474
Cow position: chr19:23613973-23614448 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 254

Conread position: 1-493
Cow position: chr19:14940361-14940856 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 24

Conread position: 1-493
Cow position: chr19:23613805-23614300 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 455, 0

Conread position: 1-497
Cow position: chr19:23614477-23614977 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 260

Conread position: 1-507
Cow position: chr19:20678240-20678748 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 452, 494

Conread position: 1-516
Cow position: chr19:20677904-20678424 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 14

Conread position: 1-537
Cow position: chr19:43570187-43569651 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 101

Conread position: 2-454
Cow position: chr19:14960269-14959819 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 104

Conread position: 2-516
Cow position: chr19:23597151-23597670 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 352

Conread position: 3-296
Cow position: chr19:14940783-14941076 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 3-497
Cow position: chr19:23613723-23614221 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 352

Conread position: 9-456
Cow position: chr19:23614653-23615100 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 96

Conread position: 13-309
Cow position: chr19:14959115-14958819 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 265, 248

Conread position: 13-385
Cow position: chr19:14959193-14958827 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 74

Conread position: 13-454
Cow position: chr19:14960174-14959737 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 21

Conread position: 13-474
Cow position: chr19:14960342-14959881 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 443, 188

Conread position: 13-496
Cow position: chr19:14940457-14940943 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 314

Conread position: 14-402
Cow position: chr19:23649940-23650328 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 11

Conread position: 15-351
Cow position: chr19:14948332-14947996 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-473
Cow position: chr19:14940543-14941003 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 86

Conread position: 16-303
Cow position: chr19:23650194-23650481 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 245

Conread position: 16-518
Cow position: chr19:23649522-23650029 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 88

Conread position: 17-503
Cow position: chr19:14940042-14940533 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 438, 7

Conread position: 17-505
Cow position: chr19:23614578-23615070 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 438, 7

Conread position: 18-426
Cow position: chr19:23650028-23650436 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 91

Conread position: 18-583
Cow position: chr19:23614074-23614642 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 440, 510

Conread position: 19-314
Cow position: chr19:20678510-20678802 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 96, 79

Conread position: 19-392
Cow position: chr19:23650113-23650486 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 19-493
Cow position: chr19:23649861-23650338 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 437, 0

Conread position: 19-497
Cow position: chr19:23614327-23614809 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 319

Conread position: 22-256
Cow position: chr19:14916188-14916419 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 110, 38

Conread position: 22-456
Cow position: chr19:23597255-23597689 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-527
Cow position: chr19:23649444-23649955 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 434, 0

Conread position: 22-650
Cow position: chr19:23613406-23614038 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 434, 506

Conread position: 24-493
Cow position: chr19:43570322-43569860 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 45

Conread position: 24-516
Cow position: chr19:14960415-14959920 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 230

Conread position: 26-307
Cow position: chr19:14959591-14959310 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 89

Conread position: 26-516
Cow position: chr19:23596926-23597418 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 109

Conread position: 28-466
Cow position: chr19:14940640-14941078 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 81

Conread position: 29-393
Cow position: chr19:14959670-14959308 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 19

Conread position: 29-396
Cow position: chr19:23597346-23597713 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 83

Conread position: 29-402
Cow position: chr19:20635400-20635027 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 153

Conread position: 29-410
Cow position: chr19:23614757-23615136 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 312

Conread position: 29-424
Cow position: chr19:20678100-20678495 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 336

Conread position: 29-426
Cow position: chr19:23614421-23614818 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 29-428
Cow position: chr19:14916028-14916422 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 270
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 53, 68

Conread position: 29-505
Cow position: chr19:14940305-14940786 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 227

Conread position: 29-505
Cow position: chr19:23614253-23614734 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 429, 0

Conread position: 30-380
Cow position: chr19:14948401-14948051 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-426
Cow position: chr19:20635483-20635087 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 64

Conread position: 30-454
Cow position: chr19:14959419-14959010 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 72

Conread position: 30-456
Cow position: chr19:14948484-14948059 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 80

Conread position: 30-474
Cow position: chr19:43570242-43569796 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 426, 0

Conread position: 30-487
Cow position: chr19:23597095-23597555 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 0

Conread position: 30-493
Cow position: chr19:20677513-20677979 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 147

Conread position: 30-496
Cow position: chr19:23613918-23614387 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 0

Conread position: 30-505
Cow position: chr19:14940222-14940702 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 422, 0

Conread position: 30-505
Cow position: chr19:23613666-23614146 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 0

Conread position: 30-505
Cow position: chr19:23649704-23650184 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 244

Conread position: 30-527
Cow position: chr19:23649788-23650291 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 0

Conread position: 33-457
Cow position: chr19:14959257-14958839 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 138

Conread position: 35-493
Cow position: chr19:23649289-23649750 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 80

Conread position: 35-504
Cow position: chr19:20678022-20678496 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 143

Conread position: 35-504
Cow position: chr19:20678190-20678664 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 141

Conread position: 35-505
Cow position: chr19:20635646-20635171 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 0

Conread position: 41-322
Cow position: chr19:20635304-20635023 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 41-554
Cow position: chr19:14915955-14916470 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 327
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 59, 16

Conread position: 41-650
Cow position: chr19:20677440-20678053 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 137

Conread position: 46-418
Cow position: chr19:20636118-20635755 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 228
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 48-516
Cow position: chr19:14939988-14940461 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 207

Conread position: 51-525
Cow position: chr19:23649389-23649869 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 0

Conread position: 51-589
Cow position: chr19:23613351-23613891 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 474

Conread position: 52-515
Cow position: chr19:23596868-23597333 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 296
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 405, 165

Conread position: 72-474
Cow position: chr19:14959711-14959309 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 60

Conread position: 107-529
Cow position: chr19:14915857-14916278 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 268
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 42, 58

Conread position: 114-426
Cow position: chr19:23649284-23649596 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 193
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 114-505
Cow position: chr19:20635735-20635339 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 248
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 338, 0

Conread position: 130-518
Cow position: chr19:14960477-14960086 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 0

Conread position: 133-706
Cow position: chr19:14939987-14940571 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 404

Conread position: 142-505
Cow position: chr19:20677373-20677741 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 230
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 232, 212

Conread position: 145-516
Cow position: chr19:43570452-43570087 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 244
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 43

Conread position: 218-505
Cow position: chr19:23613350-23613642 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 238, 0

Show alignments to all cow chromosomes.