Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8036I23.3 |
| Conread position: | 1-416 |
| Cow position: | chr2:82799477-82799892 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 260 |
| Conread position: | 1-428 |
| Cow position: | chr2:86465805-86466230 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 114, 92 |
| Conread position: | 1-524 |
| Cow position: | chr2:78755203-78755728 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 114 |
| Conread position: | 2-300 |
| Cow position: | chr2:82800150-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-453 |
| Cow position: | chr2:82799562-82800013 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 254 |
| Conread position: | 2-454 |
| Cow position: | chr2:82799814-82800266 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-519 |
| Cow position: | chr2:78754298-78754814 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 340 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 3-454 |
| Cow position: | chr2:78755873-78756323 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 106 |
| Conread position: | 3-497 |
| Cow position: | chr2:82799647-82800146 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 253 |
| Conread position: | 8-425 |
| Cow position: | chr2:86464890-86465305 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 14-313 |
| Cow position: | chr2:48689410-48689111 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 235, 270 |
| Conread position: | 14-384 |
| Cow position: | chr2:82800078-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 96 |
| Conread position: | 14-424 |
| Cow position: | chr2:86465482-86465892 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 241, 258 |
| Conread position: | 14-452 |
| Cow position: | chr2:82799994-82800432 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 242 |
| Conread position: | 15-416 |
| Cow position: | chr2:5874965-5874564 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 79, 97 |
| Conread position: | 15-426 |
| Cow position: | chr2:86465567-86465978 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 15-516 |
| Cow position: | chr2:78755384-78755887 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 94 |
| Conread position: | 15-518 |
| Cow position: | chr2:78754881-78755388 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 17-457 |
| Cow position: | chr2:78755720-78756159 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 281 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 81, 7 |
| Conread position: | 19-473 |
| Cow position: | chr2:82799747-82800203 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 315 |
| Conread position: | 22-425 |
| Cow position: | chr2:86465154-86465557 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 261 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 300, 306 |
| Conread position: | 29-335 |
| Cow position: | chr2:48689478-48689173 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 224, 69 |
| Conread position: | 29-416 |
| Cow position: | chr2:5875119-5874732 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 245 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 166, 157 |
| Conread position: | 29-442 |
| Cow position: | chr2:78754409-78754816 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 29-452 |
| Cow position: | chr2:78755565-78755986 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 100 |
| Conread position: | 29-457 |
| Cow position: | chr2:78754811-78755239 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 323 |
| Conread position: | 30-415 |
| Cow position: | chr2:5874530-5874145 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 64, 73 |
| Conread position: | 31-393 |
| Cow position: | chr2:78756070-78756428 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 246 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 91, 44 |
| Conread position: | 31-428 |
| Cow position: | chr2:78754243-78754638 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 198, 0 |
| Conread position: | 35-426 |
| Cow position: | chr2:86465335-86465726 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 338, 334 |
| Conread position: | 35-426 |
| Cow position: | chr2:86465671-86466062 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 270, 262 |
| Conread position: | 38-507 |
| Cow position: | chr2:78754166-78754638 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 300 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 143, 139 |
| Conread position: | 42-414 |
| Cow position: | chr2:5874686-5874314 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 61 |
| Conread position: | 42-426 |
| Cow position: | chr2:86465762-86466146 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 171, 179 |
| Conread position: | 42-473 |
| Cow position: | chr2:82799938-82800371 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 279 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 205, 214 |
| Conread position: | 51-418 |
| Cow position: | chr2:86465267-86465634 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 51-428 |
| Cow position: | chr2:48689540-48689164 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 62, 54 |
| Conread position: | 75-426 |
| Cow position: | chr2:82799467-82799818 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 204-504 |
| Cow position: | chr2:82799427-82799733 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 5, 31 |
Show alignments to all cow chromosomes.