Cow genome map

Conread name: Ss1.1-Pig4-TMW8036I23.3

Conread position: 1-416
Cow position:
Alignm length: 417
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 260

Conread position: 1-428
Cow position:
Alignm length: 430
Alignm identity: 266
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 114, 92

Conread position: 1-524
Cow position:
Alignm length: 531
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 114

Conread position: 2-300
Cow position:
Alignm length: 299
Alignm identity: 206
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 2-453
Cow position:
Alignm length: 453
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 254

Conread position: 2-454
Cow position:
Alignm length: 453
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-519
Cow position:
Alignm length: 528
Alignm identity: 340
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 26, 34

Conread position: 3-454
Cow position:
Alignm length: 456
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 106

Conread position: 3-497
Cow position:
Alignm length: 501
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 253

Conread position: 8-425
Cow position:
Alignm length: 421
Alignm identity: 255
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 68, 6

Conread position: 14-313
Cow position:
Alignm length: 301
Alignm identity: 188
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 235, 270

Conread position: 14-384
Cow position:
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 96

Conread position: 14-424
Cow position:
Alignm length: 414
Alignm identity: 259
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 241, 258

Conread position: 14-452
Cow position:
Alignm length: 440
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 242

Conread position: 15-416
Cow position:
Alignm length: 406
Alignm identity: 243
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 79, 97

Conread position: 15-426
Cow position:
Alignm length: 415
Alignm identity: 247
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 16

Conread position: 15-516
Cow position:
Alignm length: 509
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 94

Conread position: 15-518
Cow position:
Alignm length: 510
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 17-457
Cow position:
Alignm length: 443
Alignm identity: 281
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 81, 7

Conread position: 19-473
Cow position:
Alignm length: 458
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 315

Conread position: 22-425
Cow position:
Alignm length: 405
Alignm identity: 261
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 300, 306

Conread position: 29-335
Cow position:
Alignm length: 308
Alignm identity: 209
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 224, 69

Conread position: 29-416
Cow position:
Alignm length: 391
Alignm identity: 245
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 166, 157

Conread position: 29-442
Cow position:
Alignm length: 416
Alignm identity: 275
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 33

Conread position: 29-452
Cow position:
Alignm length: 426
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 100

Conread position: 29-457
Cow position:
Alignm length: 430
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 323

Conread position: 30-415
Cow position:
Alignm length: 392
Alignm identity: 247
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 64, 73

Conread position: 31-393
Cow position:
Alignm length: 366
Alignm identity: 246
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 91, 44

Conread position: 31-428
Cow position:
Alignm length: 398
Alignm identity: 253
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 198, 0

Conread position: 35-426
Cow position:
Alignm length: 393
Alignm identity: 249
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 338, 334

Conread position: 35-426
Cow position:
Alignm length: 396
Alignm identity: 254
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 270, 262

Conread position: 38-507
Cow position:
Alignm length: 478
Alignm identity: 300
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 143, 139

Conread position: 42-414
Cow position:
Alignm length: 378
Alignm identity: 233
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 61

Conread position: 42-426
Cow position:
Alignm length: 387
Alignm identity: 236
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 171, 179

Conread position: 42-473
Cow position:
Alignm length: 435
Alignm identity: 279
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 205, 214

Conread position: 51-418
Cow position:
Alignm length: 368
Alignm identity: 235
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 51-428
Cow position:
Alignm length: 381
Alignm identity: 236
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 62, 54

Conread position: 75-426
Cow position:
Alignm length: 352
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 204-504
Cow position:
Alignm length: 310
Alignm identity: 209
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 5, 31

Show alignments to all cow chromosomes.