Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8036I23.3 |
| Conread position: | 1-399 |
| Cow position: | chr24:17070661-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-411 |
| Cow position: | chr24:17077891-17077482 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 393, 0 |
| Conread position: | 1-454 |
| Cow position: | chr24:17070577-17071030 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-456 |
| Cow position: | chr24:17078143-17077688 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-474 |
| Cow position: | chr24:17036092-17035617 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 455, 0 |
| Conread position: | 1-477 |
| Cow position: | chr24:17035672-17035194 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 457, 0 |
| Conread position: | 1-481 |
| Cow position: | chr24:17035840-17035359 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 434, 417 |
| Conread position: | 1-527 |
| Cow position: | chr24:17078227-17077696 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 455, 0 |
| Conread position: | 1-650 |
| Cow position: | chr24:17036512-17035859 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 2-204 |
| Cow position: | chr24:16986465-16986670 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 2-320 |
| Cow position: | chr24:17013199-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 304, 0 |
| Conread position: | 3-426 |
| Cow position: | chr24:17035502-17035079 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-493 |
| Cow position: | chr24:17035586-17035093 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 252 |
| Conread position: | 3-516 |
| Cow position: | chr24:17035754-17035236 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 455, 0 |
| Conread position: | 3-589 |
| Cow position: | chr24:17036426-17035837 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 455, 532 |
| Conread position: | 13-473 |
| Cow position: | chr24:17036248-17035786 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 444, 0 |
| Conread position: | 13-516 |
| Cow position: | chr24:17070505-17071013 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 445, 0 |
| Conread position: | 13-516 |
| Cow position: | chr24:17078047-17077539 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 443, 0 |
| Conread position: | 14-516 |
| Cow position: | chr24:17035995-17035488 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 164 |
| Conread position: | 14-516 |
| Cow position: | chr24:17070422-17070929 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 442, 0 |
| Conread position: | 19-528 |
| Cow position: | chr24:17035402-17034897 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 241 |
| Conread position: | 24-516 |
| Cow position: | chr24:17078288-17077791 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 234 |
| Conread position: | 29-710 |
| Cow position: | chr24:17036148-17035458 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 321, 312 |
| Conread position: | 30-475 |
| Cow position: | chr24:17035895-17035450 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 298 |
| Conread position: | 30-525 |
| Cow position: | chr24:17036564-17036066 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 11 |
| Conread position: | 34-393 |
| Cow position: | chr24:17013147-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 114-516 |
| Cow position: | chr24:17070353-17070761 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 271 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 16, 62 |
| Conread position: | 117-515 |
| Cow position: | chr24:17078363-17077960 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 338, 0 |
| Conread position: | 118-454 |
| Cow position: | chr24:17013147-17013483 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-360 |
| Cow position: | chr24:16986445-16986655 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.