Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8036I23.3 |
| Conread position: | 1-295 |
| Cow position: | chr25:23420585-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 206 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 92, 106 |
| Conread position: | 1-402 |
| Cow position: | chr25:33157187-33156787 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 390, 0 |
| Conread position: | 1-406 |
| Cow position: | chr25:33127836-33128241 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-427 |
| Cow position: | chr25:34732070-34731646 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 265 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 80, 104 |
| Conread position: | 1-452 |
| Cow position: | chr25:34769670-34769219 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 101 |
| Conread position: | 1-473 |
| Cow position: | chr25:33144883-33145354 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 156 |
| Conread position: | 1-489 |
| Cow position: | chr25:33157271-33156781 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 17 |
| Conread position: | 1-527 |
| Cow position: | chr25:34447056-34447588 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 448, 439 |
| Conread position: | 2-225 |
| Cow position: | chr25:327042-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-246 |
| Cow position: | chr25:414740-414501 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 92, 45 |
| Conread position: | 2-425 |
| Cow position: | chr25:25652391-25652814 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 269, 250 |
| Conread position: | 2-454 |
| Cow position: | chr25:34446889-34447341 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 2-456 |
| Cow position: | chr25:34763281-34763732 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 251, 171 |
| Conread position: | 2-504 |
| Cow position: | chr25:34732321-34731815 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 79, 101 |
| Conread position: | 2-527 |
| Cow position: | chr25:33157438-33156907 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 347, 339 |
| Conread position: | 3-307 |
| Cow position: | chr25:34447562-34447857 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 9-425 |
| Cow position: | chr25:25652231-25652646 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 83, 6 |
| Conread position: | 13-256 |
| Cow position: | chr25:25653074-25653317 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-309 |
| Cow position: | chr25:22236043-22236339 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 247, 235 |
| Conread position: | 13-423 |
| Cow position: | chr25:34763043-34763450 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 262, 101 |
| Conread position: | 13-426 |
| Cow position: | chr25:25652486-25652899 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 265 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 13-426 |
| Cow position: | chr25:25652822-25653235 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 13-426 |
| Cow position: | chr25:34763208-34763618 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 248, 0 |
| Conread position: | 13-446 |
| Cow position: | chr25:33127680-33128113 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 13-450 |
| Cow position: | chr25:25652570-25653006 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 100, 93 |
| Conread position: | 13-451 |
| Cow position: | chr25:25652738-25653176 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 240, 259 |
| Conread position: | 13-457 |
| Cow position: | chr25:33144979-33145420 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 13-515 |
| Cow position: | chr25:33157343-33156836 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 89 |
| Conread position: | 13-516 |
| Cow position: | chr25:33157511-33157003 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 445, 0 |
| Conread position: | 13-526 |
| Cow position: | chr25:34447152-34447671 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 89 |
| Conread position: | 14-229 |
| Cow position: | chr25:34733962-34733747 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 95 |
| Conread position: | 14-313 |
| Cow position: | chr25:22235960-22236259 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 235, 264 |
| Conread position: | 14-425 |
| Cow position: | chr25:36801338-36801749 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 87 |
| Conread position: | 14-456 |
| Cow position: | chr25:326376-326818 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 59, 40 |
| Conread position: | 14-482 |
| Cow position: | chr25:34769741-34769272 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 441, 460 |
| Conread position: | 15-213 |
| Cow position: | chr25:34763543-34763741 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-237 |
| Cow position: | chr25:36801759-36801977 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 85 |
| Conread position: | 15-338 |
| Cow position: | chr25:18642207-18641881 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 79, 97 |
| Conread position: | 15-419 |
| Cow position: | chr25:36801099-36801491 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 237, 0 |
| Conread position: | 15-423 |
| Cow position: | chr25:36800679-36801087 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-425 |
| Cow position: | chr25:33298611-33299021 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 88 |
| Conread position: | 15-425 |
| Cow position: | chr25:33299031-33299441 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 237 |
| Conread position: | 15-425 |
| Cow position: | chr25:33306250-33305842 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 159, 62 |
| Conread position: | 15-425 |
| Cow position: | chr25:36800595-36801005 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-426 |
| Cow position: | chr25:33127766-33128177 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-426 |
| Cow position: | chr25:34762877-34763285 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 245, 0 |
| Conread position: | 15-444 |
| Cow position: | chr25:33305916-33305494 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 284 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 159, 80 |
| Conread position: | 15-489 |
| Cow position: | chr25:33306333-33305859 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 320 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 95, 46 |
| Conread position: | 15-502 |
| Cow position: | chr25:33298527-33299020 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 32 |
| Conread position: | 15-502 |
| Cow position: | chr25:33306661-33306179 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 26 |
| Conread position: | 15-504 |
| Cow position: | chr25:326713-327214 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 315 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 14, 10 |
| Conread position: | 16-295 |
| Cow position: | chr25:326546-326825 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 98, 90 |
| Conread position: | 17-305 |
| Cow position: | chr25:33145148-33145436 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-425 |
| Cow position: | chr25:33298697-33299105 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 87 |
| Conread position: | 17-497 |
| Cow position: | chr25:34433575-34434050 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 303 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 88, 7 |
| Conread position: | 19-307 |
| Cow position: | chr25:326975-327263 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 91 |
| Conread position: | 19-419 |
| Cow position: | chr25:33298867-33299267 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 81 |
| Conread position: | 19-419 |
| Cow position: | chr25:33299455-33299851 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 74 |
| Conread position: | 19-424 |
| Cow position: | chr25:23420435-23420840 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-425 |
| Cow position: | chr25:33299287-33299693 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 78 |
| Conread position: | 19-425 |
| Cow position: | chr25:36801511-36801917 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 83 |
| Conread position: | 19-453 |
| Cow position: | chr25:36800851-36801285 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 88 |
| Conread position: | 19-454 |
| Cow position: | chr25:33298783-33299218 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 81 |
| Conread position: | 19-454 |
| Cow position: | chr25:36801187-36801610 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 287 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 96, 91 |
| Conread position: | 19-493 |
| Cow position: | chr25:34732472-34731995 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 296 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 79, 74 |
| Conread position: | 19-496 |
| Cow position: | chr25:34769820-34769340 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 436, 0 |
| Conread position: | 19-682 |
| Cow position: | chr25:34446990-34447662 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 236 |
| Conread position: | 20-379 |
| Cow position: | chr25:23420520-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-452 |
| Cow position: | chr25:34433493-34433921 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 113 |
| Conread position: | 21-425 |
| Cow position: | chr25:36801429-36801833 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 79 |
| Conread position: | 22-335 |
| Cow position: | chr25:414803-414496 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 227, 51 |
| Conread position: | 22-419 |
| Cow position: | chr25:36800938-36801335 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 80 |
| Conread position: | 22-425 |
| Cow position: | chr25:33299122-33299525 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 79 |
| Conread position: | 22-425 |
| Cow position: | chr25:33305264-33304866 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 272 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 218, 146 |
| Conread position: | 22-454 |
| Cow position: | chr25:34762968-34763397 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 54 |
| Conread position: | 24-474 |
| Cow position: | chr25:23420356-23420808 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 80 |
| Conread position: | 25-454 |
| Cow position: | chr25:33305426-33305003 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 22 |
| Conread position: | 26-370 |
| Cow position: | chr25:34714177-34714521 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 89, 84 |
| Conread position: | 26-456 |
| Cow position: | chr25:34713925-34714355 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 276 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 64, 74 |
| Conread position: | 26-516 |
| Cow position: | chr25:34769897-34769402 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 430, 0 |
| Conread position: | 27-379 |
| Cow position: | chr25:36801603-36801955 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 63, 73 |
| Conread position: | 27-424 |
| Cow position: | chr25:22235889-22236285 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 256 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 226, 238 |
| Conread position: | 27-425 |
| Cow position: | chr25:25652920-25653318 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 153, 149 |
| Conread position: | 27-504 |
| Cow position: | chr25:34447250-34447730 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 423, 447 |
| Conread position: | 28-425 |
| Cow position: | chr25:33299380-33299777 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 72 |
| Conread position: | 28-497 |
| Cow position: | chr25:33299212-33299685 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 72 |
| Conread position: | 29-334 |
| Cow position: | chr25:36801689-36801990 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 270, 0 |
| Conread position: | 29-454 |
| Cow position: | chr25:34714096-34714521 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 78, 67 |
| Conread position: | 29-516 |
| Cow position: | chr25:34770146-34769654 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 21 |
| Conread position: | 29-634 |
| Cow position: | chr25:34770062-34769453 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 427, 505 |
| Conread position: | 30-291 |
| Cow position: | chr25:366788-367049 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-419 |
| Cow position: | chr25:33305819-33305433 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 60, 70 |
| Conread position: | 30-419 |
| Cow position: | chr25:36800778-36801167 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 79 |
| Conread position: | 30-425 |
| Cow position: | chr25:33298962-33299357 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 234 |
| Conread position: | 30-425 |
| Cow position: | chr25:36800526-36800921 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 64, 70 |
| Conread position: | 30-454 |
| Cow position: | chr25:25652335-25652759 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 328, 320 |
| Conread position: | 30-455 |
| Cow position: | chr25:34713845-34714270 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 265 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 60, 70 |
| Conread position: | 32-425 |
| Cow position: | chr25:36800444-36800837 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 237 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 33-380 |
| Cow position: | chr25:326479-326826 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 22, 29 |
| Conread position: | 34-250 |
| Cow position: | chr25:34433003-34433219 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 41-503 |
| Cow position: | chr25:33305972-33305513 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 305 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 42-426 |
| Cow position: | chr25:3664006-3664390 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 211, 223 |
| Conread position: | 44-424 |
| Cow position: | chr25:34732615-34732234 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 306, 297 |
| Conread position: | 51-379 |
| Cow position: | chr25:34732104-34731776 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 200, 218 |
| Conread position: | 51-380 |
| Cow position: | chr25:366725-367054 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 186, 203 |
| Conread position: | 51-397 |
| Cow position: | chr25:346448-346794 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 234 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 186, 197 |
| Conread position: | 51-424 |
| Cow position: | chr25:33298479-33298852 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 221 |
| Conread position: | 51-428 |
| Cow position: | chr25:22235829-22236206 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 64, 49 |
| Conread position: | 51-454 |
| Cow position: | chr25:25652188-25652591 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 49 |
| Conread position: | 54-527 |
| Cow position: | chr25:34714037-34714516 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 40, 50 |
| Conread position: | 63-547 |
| Cow position: | chr25:33127645-33128128 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 49 |
| Conread position: | 72-425 |
| Cow position: | chr25:34446875-34447228 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 46, 53 |
| Conread position: | 72-497 |
| Cow position: | chr25:23420320-23420748 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 29 |
| Conread position: | 72-521 |
| Cow position: | chr25:33144870-33145321 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 169 |
| Conread position: | 75-393 |
| Cow position: | chr25:326947-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 36 |
| Conread position: | 75-427 |
| Cow position: | chr25:34762853-34763202 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 164, 180 |
| Conread position: | 98-339 |
| Cow position: | chr25:34432983-34433224 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 99-444 |
| Cow position: | chr25:18642207-18641860 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 106, 101 |
| Conread position: | 99-515 |
| Cow position: | chr25:34770160-34769739 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 39 |
| Conread position: | 109-427 |
| Cow position: | chr25:414800-414488 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 140, 48 |
| Conread position: | 117-425 |
| Cow position: | chr25:33298389-33298685 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 151, 64 |
| Conread position: | 126-454 |
| Cow position: | chr25:33298470-33298798 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 223, 231 |
| Conread position: | 130-424 |
| Cow position: | chr25:326918-327212 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 117, 131 |
| Conread position: | 130-453 |
| Cow position: | chr25:346443-346766 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 132-426 |
| Cow position: | chr25:33144846-33145137 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 172, 166 |
| Conread position: | 134-426 |
| Cow position: | chr25:22235828-22236120 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 112, 138 |
| Conread position: | 135-398 |
| Cow position: | chr25:34762829-34763092 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 131, 113 |
| Conread position: | 135-451 |
| Cow position: | chr25:366725-367041 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 135-453 |
| Cow position: | chr25:34732104-34731786 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 115, 132 |
| Conread position: | 150-424 |
| Cow position: | chr25:34433224-34433495 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 229, 147 |
| Conread position: | 153-379 |
| Cow position: | chr25:18641406-18641186 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 179-447 |
| Cow position: | chr25:33157513-33157245 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 182-402 |
| Cow position: | chr25:34432983-34433203 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 84, 72 |
| Conread position: | 190-454 |
| Cow position: | chr25:34433495-34433756 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 57, 74 |
| Conread position: | 212-464 |
| Cow position: | chr25:34732615-34732363 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 48 |
Show alignments to all cow chromosomes.