Cow genome map

Conread name: Ss1.1-Pig4-TMW8036I23.3

Conread position: 1-387
Cow position:
Alignm length: 389
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 176

Conread position: 1-426
Cow position:
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-426
Cow position:
Alignm length: 434
Alignm identity: 282
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 21, 29

Conread position: 1-495
Cow position:
Alignm length: 500
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 17

Conread position: 1-497
Cow position:
Alignm length: 505
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 23

Conread position: 1-503
Cow position:
Alignm length: 509
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 10

Conread position: 1-503
Cow position:
Alignm length: 511
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 108

Conread position: 1-516
Cow position:
Alignm length: 521
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 445, 0

Conread position: 1-527
Cow position:
Alignm length: 537
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 14

Conread position: 13-514
Cow position:
Alignm length: 508
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 83

Conread position: 15-481
Cow position:
Alignm length: 470
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 326

Conread position: 15-503
Cow position:
Alignm length: 494
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 440, 0

Conread position: 17-516
Cow position:
Alignm length: 506
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 340

Conread position: 18-426
Cow position:
Alignm length: 409
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 19-173
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 88, 67

Conread position: 19-233
Cow position:
Alignm length: 219
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 96

Conread position: 19-276
Cow position:
Alignm length: 258
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 19-425
Cow position:
Alignm length: 409
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 246

Conread position: 19-493
Cow position:
Alignm length: 478
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 438, 7

Conread position: 19-504
Cow position:
Alignm length: 496
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 65

Conread position: 21-429
Cow position:
Alignm length: 414
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 9

Conread position: 22-359
Cow position:
Alignm length: 339
Alignm identity: 224
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 60, 82

Conread position: 22-427
Cow position:
Alignm length: 408
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 381, 0

Conread position: 22-474
Cow position:
Alignm length: 458
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 87

Conread position: 22-475
Cow position:
Alignm length: 456
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 434, 0

Conread position: 22-503
Cow position:
Alignm length: 488
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 87

Conread position: 22-516
Cow position:
Alignm length: 500
Alignm identity: 299
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 432, 51

Conread position: 22-516
Cow position:
Alignm length: 502
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 155

Conread position: 24-516
Cow position:
Alignm length: 499
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 71

Conread position: 27-442
Cow position:
Alignm length: 420
Alignm identity: 255
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 95, 77

Conread position: 28-339
Cow position:
Alignm length: 314
Alignm identity: 207
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 88, 49

Conread position: 28-504
Cow position:
Alignm length: 488
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 234

Conread position: 28-516
Cow position:
Alignm length: 496
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 227

Conread position: 29-178
Cow position:
Alignm length: 150
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 29-256
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 218, 0

Conread position: 29-299
Cow position:
Alignm length: 278
Alignm identity: 199
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 170, 150

Conread position: 29-339
Cow position:
Alignm length: 315
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 158

Conread position: 29-424
Cow position:
Alignm length: 397
Alignm identity: 253
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 134, 148

Conread position: 29-424
Cow position:
Alignm length: 397
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 103

Conread position: 29-424
Cow position:
Alignm length: 404
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 80

Conread position: 29-425
Cow position:
Alignm length: 403
Alignm identity: 262
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 62, 71

Conread position: 29-425
Cow position:
Alignm length: 400
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 68

Conread position: 29-425
Cow position:
Alignm length: 406
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 57

Conread position: 29-426
Cow position:
Alignm length: 402
Alignm identity: 253
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 83, 87

Conread position: 29-429
Cow position:
Alignm length: 406
Alignm identity: 261
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 87, 69

Conread position: 29-429
Cow position:
Alignm length: 406
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 61

Conread position: 29-452
Cow position:
Alignm length: 427
Alignm identity: 280
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 312, 299

Conread position: 29-455
Cow position:
Alignm length: 428
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 298

Conread position: 29-473
Cow position:
Alignm length: 448
Alignm identity: 286
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 78, 73

Conread position: 29-493
Cow position:
Alignm length: 475
Alignm identity: 307
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 86, 70

Conread position: 29-496
Cow position:
Alignm length: 477
Alignm identity: 309
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 73, 63

Conread position: 29-497
Cow position:
Alignm length: 476
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 71

Conread position: 29-497
Cow position:
Alignm length: 475
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 71

Conread position: 29-503
Cow position:
Alignm length: 486
Alignm identity: 300
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 170, 157

Conread position: 29-508
Cow position:
Alignm length: 493
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 70

Conread position: 29-508
Cow position:
Alignm length: 488
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 149

Conread position: 29-515
Cow position:
Alignm length: 493
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 72

Conread position: 29-516
Cow position:
Alignm length: 493
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 0

Conread position: 29-521
Cow position:
Alignm length: 503
Alignm identity: 318
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 86, 80

Conread position: 29-524
Cow position:
Alignm length: 504
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 78

Conread position: 30-315
Cow position:
Alignm length: 288
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 249, 225

Conread position: 30-426
Cow position:
Alignm length: 397
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-429
Cow position:
Alignm length: 404
Alignm identity: 265
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 86, 68

Conread position: 30-431
Cow position:
Alignm length: 405
Alignm identity: 258
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 225, 251

Conread position: 30-477
Cow position:
Alignm length: 452
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 64

Conread position: 30-481
Cow position:
Alignm length: 455
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 311

Conread position: 30-494
Cow position:
Alignm length: 472
Alignm identity: 306
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 79, 85

Conread position: 30-679
Cow position:
Alignm length: 666
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 68

Conread position: 31-426
Cow position:
Alignm length: 401
Alignm identity: 258
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 84, 67

Conread position: 31-473
Cow position:
Alignm length: 446
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 230

Conread position: 34-362
Cow position:
Alignm length: 331
Alignm identity: 221
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 73, 60

Conread position: 35-426
Cow position:
Alignm length: 393
Alignm identity: 247
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 314, 306

Conread position: 35-517
Cow position:
Alignm length: 493
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 74

Conread position: 37-424
Cow position:
Alignm length: 390
Alignm identity: 250
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 71, 78

Conread position: 42-429
Cow position:
Alignm length: 393
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 55

Conread position: 43-500
Cow position:
Alignm length: 459
Alignm identity: 281
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 157, 134

Conread position: 44-429
Cow position:
Alignm length: 392
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 228

Conread position: 52-454
Cow position:
Alignm length: 405
Alignm identity: 259
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 132, 139

Conread position: 53-508
Cow position:
Alignm length: 467
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 44

Conread position: 57-426
Cow position:
Alignm length: 375
Alignm identity: 241
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 58, 42

Conread position: 79-424
Cow position:
Alignm length: 355
Alignm identity: 240
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 15, 185

Conread position: 87-506
Cow position:
Alignm length: 426
Alignm identity: 254
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 96-424
Cow position:
Alignm length: 331
Alignm identity: 220
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 274

Conread position: 105-493
Cow position:
Alignm length: 393
Alignm identity: 247
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 159, 150

Conread position: 106-474
Cow position:
Alignm length: 371
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 0

Conread position: 114-521
Cow position:
Alignm length: 414
Alignm identity: 259
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 133, 146

Conread position: 129-497
Cow position:
Alignm length: 375
Alignm identity: 240
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 132-429
Cow position:
Alignm length: 303
Alignm identity: 200
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 63, 43

Conread position: 140-496
Cow position:
Alignm length: 364
Alignm identity: 241
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 68, 37

Conread position: 150-527
Cow position:
Alignm length: 384
Alignm identity: 254
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 306, 0

Show alignments to all cow chromosomes.