Cow genome map
Conread name: | Ss1.1-Pig4-TMW8036I23.3 |
Conread position: | 1-387 |
Cow position: | chr7:11600817-11600430 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 176 |
Conread position: | 1-426 |
Cow position: | chr7:1014973-1015398 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-426 |
Cow position: | chr7:8277798-8278223 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 282 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 21, 29 |
Conread position: | 1-495 |
Cow position: | chr7:3180319-3180814 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 17 |
Conread position: | 1-497 |
Cow position: | chr7:42879158-42878657 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 23 |
Conread position: | 1-503 |
Cow position: | chr7:3179899-3180406 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 10 |
Conread position: | 1-503 |
Cow position: | chr7:8243504-8244009 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 108 |
Conread position: | 1-516 |
Cow position: | chr7:11601069-11600549 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 445, 0 |
Conread position: | 1-527 |
Cow position: | chr7:3180067-3180599 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 14 |
Conread position: | 13-514 |
Cow position: | chr7:18390292-18390798 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 83 |
Conread position: | 15-481 |
Cow position: | chr7:11601139-11600672 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 333, 326 |
Conread position: | 15-503 |
Cow position: | chr7:42878808-42878315 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 440, 0 |
Conread position: | 17-516 |
Cow position: | chr7:1014653-1015157 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 323, 340 |
Conread position: | 18-426 |
Cow position: | chr7:11600884-11600476 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 19-173 |
Cow position: | chr7:1440110-1440264 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 115 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 88, 67 |
Conread position: | 19-233 |
Cow position: | chr7:42878468-42878251 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 150 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 75, 96 |
Conread position: | 19-276 |
Cow position: | chr7:1438469-1438726 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 171 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 19-425 |
Cow position: | chr7:18390046-18390452 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 228, 246 |
Conread position: | 19-493 |
Cow position: | chr7:1014908-1015384 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 438, 7 |
Conread position: | 19-504 |
Cow position: | chr7:1439522-1440012 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 65 |
Conread position: | 21-429 |
Cow position: | chr7:8324956-8325363 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 9 |
Conread position: | 22-359 |
Cow position: | chr7:1438388-1438724 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 224 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 60, 82 |
Conread position: | 22-427 |
Cow position: | chr7:1015078-1015485 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 381, 0 |
Conread position: | 22-474 |
Cow position: | chr7:42879221-42878767 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 87 |
Conread position: | 22-475 |
Cow position: | chr7:42878717-42878262 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 434, 0 |
Conread position: | 22-503 |
Cow position: | chr7:42878969-42878483 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 87 |
Conread position: | 22-516 |
Cow position: | chr7:1438138-1438635 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 299 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 432, 51 |
Conread position: | 22-516 |
Cow position: | chr7:11601216-11600717 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 155 |
Conread position: | 24-516 |
Cow position: | chr7:3179838-3180335 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 71 |
Conread position: | 27-442 |
Cow position: | chr7:28846567-28846982 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 255 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 95, 77 |
Conread position: | 28-339 |
Cow position: | chr7:11434587-11434283 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 207 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 88, 49 |
Conread position: | 28-504 |
Cow position: | chr7:8325214-8325695 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 234 |
Conread position: | 28-516 |
Cow position: | chr7:3180178-3180671 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 239, 227 |
Conread position: | 29-178 |
Cow position: | chr7:11434425-11434276 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 109 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 29-256 |
Cow position: | chr7:1440036-1440264 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 165 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 218, 0 |
Conread position: | 29-299 |
Cow position: | chr7:8325887-8326160 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 199 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 170, 150 |
Conread position: | 29-339 |
Cow position: | chr7:8325803-8326113 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 158 |
Conread position: | 29-424 |
Cow position: | chr7:1438311-1438706 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 253 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 134, 148 |
Conread position: | 29-424 |
Cow position: | chr7:1439869-1440263 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 338, 103 |
Conread position: | 29-424 |
Cow position: | chr7:8325635-8326030 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 80 |
Conread position: | 29-425 |
Cow position: | chr7:1439448-1439846 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 262 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 62, 71 |
Conread position: | 29-425 |
Cow position: | chr7:8277658-8278054 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 68 |
Conread position: | 29-425 |
Cow position: | chr7:8277910-8278306 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 57 |
Conread position: | 29-426 |
Cow position: | chr7:8243029-8243425 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 253 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 83, 87 |
Conread position: | 29-429 |
Cow position: | chr7:8242861-8243261 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 261 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 87, 69 |
Conread position: | 29-429 |
Cow position: | chr7:8325383-8325783 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 61 |
Conread position: | 29-452 |
Cow position: | chr7:8243700-8244118 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 280 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 312, 299 |
Conread position: | 29-455 |
Cow position: | chr7:18390140-18390566 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 298 |
Conread position: | 29-473 |
Cow position: | chr7:1014335-1014775 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 286 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 78, 73 |
Conread position: | 29-493 |
Cow position: | chr7:8277574-8278041 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 307 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 86, 70 |
Conread position: | 29-496 |
Cow position: | chr7:8277406-8277876 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 309 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 73, 63 |
Conread position: | 29-497 |
Cow position: | chr7:42878878-42878406 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 71 |
Conread position: | 29-497 |
Cow position: | chr7:42879046-42878574 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 71 |
Conread position: | 29-503 |
Cow position: | chr7:8278246-8278716 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 300 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 170, 157 |
Conread position: | 29-508 |
Cow position: | chr7:8324795-8325279 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 70 |
Conread position: | 29-508 |
Cow position: | chr7:8325299-8325783 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 149 |
Conread position: | 29-515 |
Cow position: | chr7:3180263-3180754 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 72 |
Conread position: | 29-516 |
Cow position: | chr7:3179759-3180251 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 427, 0 |
Conread position: | 29-521 |
Cow position: | chr7:8243448-8243945 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 318 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 86, 80 |
Conread position: | 29-524 |
Cow position: | chr7:1014833-1015334 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 78 |
Conread position: | 30-315 |
Cow position: | chr7:11434508-11434223 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 190 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 249, 225 |
Conread position: | 30-426 |
Cow position: | chr7:18390225-18390621 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 30-429 |
Cow position: | chr7:11434753-11434361 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 265 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 86, 68 |
Conread position: | 30-431 |
Cow position: | chr7:8242946-8243347 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 258 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 225, 251 |
Conread position: | 30-477 |
Cow position: | chr7:1014750-1015199 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 64 |
Conread position: | 30-481 |
Cow position: | chr7:11600956-11600504 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 319, 311 |
Conread position: | 30-494 |
Cow position: | chr7:8277323-8277785 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 306 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 79, 85 |
Conread position: | 30-679 |
Cow position: | chr7:3180012-3180670 (view UCSC Genome Browser custom track) |
Alignm length: | 666 |
Alignm identity: | 454 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 68 |
Conread position: | 31-426 |
Cow position: | chr7:11434668-11434280 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 258 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 84, 67 |
Conread position: | 31-473 |
Cow position: | chr7:42879296-42878852 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 230 |
Conread position: | 34-362 |
Cow position: | chr7:18390481-18390809 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 221 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 73, 60 |
Conread position: | 35-426 |
Cow position: | chr7:1014257-1014648 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 247 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 314, 306 |
Conread position: | 35-517 |
Cow position: | chr7:8325473-8325960 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 74 |
Conread position: | 37-424 |
Cow position: | chr7:8278170-8278555 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 250 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 71, 78 |
Conread position: | 42-429 |
Cow position: | chr7:8325732-8326119 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 55 |
Conread position: | 43-500 |
Cow position: | chr7:11434824-11434377 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 281 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 157, 134 |
Conread position: | 44-429 |
Cow position: | chr7:8243379-8243764 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 228 |
Conread position: | 52-454 |
Cow position: | chr7:18389995-18390397 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 259 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 132, 139 |
Conread position: | 53-508 |
Cow position: | chr7:8324735-8325195 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 44 |
Conread position: | 57-426 |
Cow position: | chr7:8242805-8243174 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 241 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 58, 42 |
Conread position: | 79-424 |
Cow position: | chr7:1439410-1439762 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 240 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 15, 185 |
Conread position: | 87-506 |
Cow position: | chr7:18389945-18390370 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 254 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 96-424 |
Cow position: | chr7:1014233-1014562 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 220 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 20, 274 |
Conread position: | 105-493 |
Cow position: | chr7:1014159-1014550 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 247 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 159, 150 |
Conread position: | 106-474 |
Cow position: | chr7:42879305-42878935 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 350, 0 |
Conread position: | 114-521 |
Cow position: | chr7:1438312-1438724 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 259 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 133, 146 |
Conread position: | 129-497 |
Cow position: | chr7:42879368-42878994 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 240 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 132-429 |
Cow position: | chr7:8277257-8277554 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 200 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 63, 43 |
Conread position: | 140-496 |
Cow position: | chr7:8242804-8243163 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 241 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 68, 37 |
Conread position: | 150-527 |
Cow position: | chr7:3179712-3180095 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 254 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 306, 0 |
Show alignments to all cow chromosomes.