Cow genome map

Conread name: Ss1.1-Pig4-TMW8036I23.3

Conread position: 1-380
Cow position: chr8:6957962-6957586 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 238
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 245, 175

Conread position: 1-424
Cow position: chr8:55580940-55581363 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 17

Conread position: 1-481
Cow position: chr8:48407428-48406947 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 9

Conread position: 2-260
Cow position: chr8:48406587-48406329 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 2-642
Cow position: chr8:48407007-48406363 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 287

Conread position: 13-516
Cow position: chr8:55581036-55581544 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 81

Conread position: 15-497
Cow position: chr8:46816009-46816496 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 312

Conread position: 17-482
Cow position: chr8:45201489-45201954 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 6

Conread position: 17-503
Cow position: chr8:46816264-46816754 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 439, 13

Conread position: 17-524
Cow position: chr8:46816768-46817280 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 9

Conread position: 19-391
Cow position: chr8:6958027-6957657 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 248
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 230, 5

Conread position: 21-256
Cow position: chr8:46817107-46817343 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 73, 86

Conread position: 21-509
Cow position: chr8:48407576-48407082 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 435, 0

Conread position: 22-299
Cow position: chr8:55581465-55581742 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 85, 72

Conread position: 22-518
Cow position: chr8:46816352-46816853 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 237

Conread position: 24-427
Cow position: chr8:55581299-55581702 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 73

Conread position: 26-247
Cow position: chr8:48406479-48406258 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 155, 162

Conread position: 28-335
Cow position: chr8:45201667-45201974 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 66, 72

Conread position: 28-518
Cow position: chr8:46815935-46816433 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 29-410
Cow position: chr8:48407148-48406767 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 64

Conread position: 29-421
Cow position: chr8:45201584-45201976 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 29-454
Cow position: chr8:48407232-48406807 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 231

Conread position: 29-466
Cow position: chr8:46816947-46817386 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 0

Conread position: 29-467
Cow position: chr8:55581220-55581660 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 424, 0

Conread position: 29-493
Cow position: chr8:45201248-45201715 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 333

Conread position: 29-497
Cow position: chr8:48407484-48407012 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 65

Conread position: 29-502
Cow position: chr8:48406728-48406253 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 8

Conread position: 29-503
Cow position: chr8:46816191-46816670 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 82

Conread position: 29-504
Cow position: chr8:46816527-46817007 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 71

Conread position: 29-517
Cow position: chr8:45201416-45201909 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 78

Conread position: 29-518
Cow position: chr8:45201080-45201574 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 0

Conread position: 29-518
Cow position: chr8:45201164-45201658 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 226

Conread position: 29-519
Cow position: chr8:46816695-46817190 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 82

Conread position: 29-521
Cow position: chr8:46816863-46817360 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 226

Conread position: 29-527
Cow position: chr8:48407316-48406812 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 0

Conread position: 30-497
Cow position: chr8:45200829-45201300 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 72

Conread position: 30-505
Cow position: chr8:55580885-55581365 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 71

Conread position: 30-506
Cow position: chr8:45200913-45201394 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 17

Conread position: 30-517
Cow position: chr8:46816108-46816600 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 222

Conread position: 30-518
Cow position: chr8:45201333-45201826 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 56

Conread position: 32-504
Cow position: chr8:45200999-45201476 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 68

Conread position: 34-503
Cow position: chr8:55580805-55581279 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 29

Conread position: 58-516
Cow position: chr8:55580745-55581208 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 41

Conread position: 61-474
Cow position: chr8:48407620-48407205 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 285

Conread position: 68-420
Cow position: chr8:6958063-6957712 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 0

Conread position: 72-517
Cow position: chr8:45200787-45201237 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 276
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 384, 0

Conread position: 118-650
Cow position: chr8:48407647-48407111 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 57

Conread position: 156-454
Cow position: chr8:6958059-6957762 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 278, 0

Conread position: 240-466
Cow position: chr8:6958059-6957831 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 83, 87

Show alignments to all cow chromosomes.