Cow genome map
Conread name: | Ss1.1-Pig4-TMW8036I23.3 |
Conread position: | 1-380 |
Cow position: | chr8:6957962-6957586 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 238 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 245, 175 |
Conread position: | 1-424 |
Cow position: | chr8:55580940-55581363 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 17 |
Conread position: | 1-481 |
Cow position: | chr8:48407428-48406947 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 9 |
Conread position: | 2-260 |
Cow position: | chr8:48406587-48406329 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 178 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-642 |
Cow position: | chr8:48407007-48406363 (view UCSC Genome Browser custom track) |
Alignm length: | 650 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 294, 287 |
Conread position: | 13-516 |
Cow position: | chr8:55581036-55581544 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 81 |
Conread position: | 15-497 |
Cow position: | chr8:46816009-46816496 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 306, 312 |
Conread position: | 17-482 |
Cow position: | chr8:45201489-45201954 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 6 |
Conread position: | 17-503 |
Cow position: | chr8:46816264-46816754 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 439, 13 |
Conread position: | 17-524 |
Cow position: | chr8:46816768-46817280 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 9 |
Conread position: | 19-391 |
Cow position: | chr8:6958027-6957657 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 248 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 230, 5 |
Conread position: | 21-256 |
Cow position: | chr8:46817107-46817343 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 171 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 73, 86 |
Conread position: | 21-509 |
Cow position: | chr8:48407576-48407082 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 435, 0 |
Conread position: | 22-299 |
Cow position: | chr8:55581465-55581742 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 191 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 85, 72 |
Conread position: | 22-518 |
Cow position: | chr8:46816352-46816853 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 244, 237 |
Conread position: | 24-427 |
Cow position: | chr8:55581299-55581702 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 73 |
Conread position: | 26-247 |
Cow position: | chr8:48406479-48406258 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 160 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 155, 162 |
Conread position: | 28-335 |
Cow position: | chr8:45201667-45201974 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 210 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 66, 72 |
Conread position: | 28-518 |
Cow position: | chr8:46815935-46816433 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 29-410 |
Cow position: | chr8:48407148-48406767 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 64 |
Conread position: | 29-421 |
Cow position: | chr8:45201584-45201976 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 29-454 |
Cow position: | chr8:48407232-48406807 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 231 |
Conread position: | 29-466 |
Cow position: | chr8:46816947-46817386 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 427, 0 |
Conread position: | 29-467 |
Cow position: | chr8:55581220-55581660 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 424, 0 |
Conread position: | 29-493 |
Cow position: | chr8:45201248-45201715 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 338, 333 |
Conread position: | 29-497 |
Cow position: | chr8:48407484-48407012 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 65 |
Conread position: | 29-502 |
Cow position: | chr8:48406728-48406253 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 8 |
Conread position: | 29-503 |
Cow position: | chr8:46816191-46816670 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 82 |
Conread position: | 29-504 |
Cow position: | chr8:46816527-46817007 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 71 |
Conread position: | 29-517 |
Cow position: | chr8:45201416-45201909 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 78 |
Conread position: | 29-518 |
Cow position: | chr8:45201080-45201574 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 427, 0 |
Conread position: | 29-518 |
Cow position: | chr8:45201164-45201658 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 237, 226 |
Conread position: | 29-519 |
Cow position: | chr8:46816695-46817190 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 82 |
Conread position: | 29-521 |
Cow position: | chr8:46816863-46817360 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 237, 226 |
Conread position: | 29-527 |
Cow position: | chr8:48407316-48406812 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 427, 0 |
Conread position: | 30-497 |
Cow position: | chr8:45200829-45201300 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 72 |
Conread position: | 30-505 |
Cow position: | chr8:55580885-55581365 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 71 |
Conread position: | 30-506 |
Cow position: | chr8:45200913-45201394 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 17 |
Conread position: | 30-517 |
Cow position: | chr8:46816108-46816600 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 234, 222 |
Conread position: | 30-518 |
Cow position: | chr8:45201333-45201826 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 56 |
Conread position: | 32-504 |
Cow position: | chr8:45200999-45201476 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 68 |
Conread position: | 34-503 |
Cow position: | chr8:55580805-55581279 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 29 |
Conread position: | 58-516 |
Cow position: | chr8:55580745-55581208 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 41 |
Conread position: | 61-474 |
Cow position: | chr8:48407620-48407205 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 275, 285 |
Conread position: | 68-420 |
Cow position: | chr8:6958063-6957712 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 0 |
Conread position: | 72-517 |
Cow position: | chr8:45200787-45201237 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 276 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 384, 0 |
Conread position: | 118-650 |
Cow position: | chr8:48407647-48407111 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 57 |
Conread position: | 156-454 |
Cow position: | chr8:6958059-6957762 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 201 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 278, 0 |
Conread position: | 240-466 |
Cow position: | chr8:6958059-6957831 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 162 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 83, 87 |
Show alignments to all cow chromosomes.