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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8036M17.3
        

               
Conread position:
               
361-671
               

               
Cow position:
               
chr4:45765113-45764801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
25, 203
               

               
Conread position:
               
382-661
               

               
Cow position:
               
chr4:61080150-61080430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
116, 40
               

               
Conread position:
               
383-678
               

               
Cow position:
               
chr4:43324971-43324682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
384-684
               

               
Cow position:
               
chr4:32859127-32858812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
38, 95
               

               
Conread position:
               
385-684
               

               
Cow position:
               
chr4:59889673-59889375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
51, 17
               

               
Conread position:
               
386-615
               

               
Cow position:
               
chr4:1047365-1047132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
386-683
               

               
Cow position:
               
chr4:1369160-1368868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
218, 36
               

               
Conread position:
               
386-683
               

               
Cow position:
               
chr4:27288206-27287907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
64, 118
               

               
Conread position:
               
386-684
               

               
Cow position:
               
chr4:10541335-10541043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
82, 70
               

               
Conread position:
               
387-600
               

               
Cow position:
               
chr4:61625663-61625451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
387-608
               

               
Cow position:
               
chr4:64790864-64791087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
63, 110
               

               
Conread position:
               
387-623
               

               
Cow position:
               
chr4:21843620-21843380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-623
               

               
Cow position:
               
chr4:54931706-54931472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
387-632
               

               
Cow position:
               
chr4:26911681-26911930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
387-635
               

               
Cow position:
               
chr4:30699934-30700184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 165
               

               
Conread position:
               
387-636
               

               
Cow position:
               
chr4:25116449-25116204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
63, 43
               

               
Conread position:
               
387-636
               

               
Cow position:
               
chr4:31485082-31484829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-636
               

               
Cow position:
               
chr4:41131247-41130994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-650
               

               
Cow position:
               
chr4:13328583-13328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-654
               

               
Cow position:
               
chr4:38909400-38909671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
387-657
               

               
Cow position:
               
chr4:17471342-17471606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
189, 46
               

               
Conread position:
               
387-657
               

               
Cow position:
               
chr4:41288015-41287757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
387-658
               

               
Cow position:
               
chr4:3252644-3252377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-660
               

               
Cow position:
               
chr4:27292990-27292712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
49, 35
               

               
Conread position:
               
387-660
               

               
Cow position:
               
chr4:30540767-30540490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-660
               

               
Cow position:
               
chr4:33831530-33831253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-660
               

               
Cow position:
               
chr4:34176084-34175805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 160
               

               
Conread position:
               
387-660
               

               
Cow position:
               
chr4:64181172-64180900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 129
               

               
Conread position:
               
387-661
               

               
Cow position:
               
chr4:3849499-3849776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
387-664
               

               
Cow position:
               
chr4:35929382-35929664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-669
               

               
Cow position:
               
chr4:61952396-61952674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
387-671
               

               
Cow position:
               
chr4:19236969-19237255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
387-671
               

               
Cow position:
               
chr4:22850771-22850487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
217, 35
               

               
Conread position:
               
387-671
               

               
Cow position:
               
chr4:67600768-67600487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-675
               

               
Cow position:
               
chr4:25983189-25983478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-676
               

               
Cow position:
               
chr4:41957661-41957954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-678
               

               
Cow position:
               
chr4:36899277-36899572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-680
               

               
Cow position:
               
chr4:3474576-3474868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-680
               

               
Cow position:
               
chr4:16363100-16363397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:606505-606803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:1028331-1028025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:3355037-3354744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
217, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:4086463-4086172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:4185078-4185374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:4850241-4850539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:7214877-7214578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:7779300-7779598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:9040846-9041144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 37
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:10403815-10403517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:10424392-10424690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:15617594-15617892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:16832650-16832352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
98, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:17068208-17067915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
217, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:18004614-18004912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:18330986-18331284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:19049161-19049459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:20789694-20789984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
44, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:26886023-26885725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:35144645-35144347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:36073921-36074218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:38583781-38584075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
70, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:40697567-40697269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:41472930-41472632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:47949439-47949141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:48375701-48375999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:54696131-54695834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 138
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:54972950-54973247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:60580230-60579932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:62907121-62906824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:62962460-62962162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:65842993-65842700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:66174423-66174123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr4:68880413-68880715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:1927735-1927436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:6266314-6266017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:10122306-10122605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:17033601-17033302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:19956925-19957226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:20616818-20616519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:21341973-21342272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:23304441-23304142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:25596585-25596287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:26875008-26874709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:27177728-27178026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:33020732-33020433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:33171056-33171355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:33629132-33628833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:38564794-38564495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:40217738-40218037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:41961796-41962095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:43316749-43316450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:47115735-47116035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
63, 252
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:47263677-47263976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:48029758-48030057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:54810947-54810648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:57987644-57987942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
63, 193
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:60224972-60224676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:60855660-60855959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:65581415-65581718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-682
               

               
Cow position:
               
chr4:67383181-67383476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:2263809-2263507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:3170182-3170480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:3284458-3284158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:4379284-4379573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
217, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:6487467-6487168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:7049163-7048870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:10135302-10135005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:12605971-12605680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:12840841-12841144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:17876857-17877158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:18336050-18335751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
63, 37
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:18813310-18813010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:20243056-20243356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:21297881-21297580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:23150757-23150459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:27337112-27337411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:27539566-27539862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:29530557-29530258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:30508099-30508398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:31562331-31562033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:33181388-33181086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:34700651-34700357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:34712717-34713016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:36026370-36026071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:37786202-37786499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:39645652-39645955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:40437350-40437065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
63, 43
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:43883993-43884293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:44901158-44901453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
63, 33
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:46711706-46711404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:54189670-54189964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:61242183-61242479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:61449413-61449713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
387-683
               

               
Cow position:
               
chr4:68795612-68795905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
51, 35
               

               
Conread position:
               
387-684
               

               
Cow position:
               
chr4:2139961-2140259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
63, 116
               

               
Conread position:
               
387-684
               

               
Cow position:
               
chr4:9391931-9391634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 242
               

               
Conread position:
               
387-684
               

               
Cow position:
               
chr4:19264580-19264869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
387-684
               

               
Cow position:
               
chr4:21056155-21056438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-684
               

               
Cow position:
               
chr4:65345346-65345056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 35
               

               
Conread position:
               
388-671
               

               
Cow position:
               
chr4:2349812-2349531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
211, 34
               

               
Conread position:
               
388-680
               

               
Cow position:
               
chr4:48205834-48205542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
62, 137
               

               
Conread position:
               
388-681
               

               
Cow position:
               
chr4:962687-962395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
388-681
               

               
Cow position:
               
chr4:11192856-11193156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
388-683
               

               
Cow position:
               
chr4:22316626-22316924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
61, 36
               

               
Conread position:
               
388-683
               

               
Cow position:
               
chr4:55670150-55670439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
389-682
               

               
Cow position:
               
chr4:358787-359081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
207, 33
               

               
Conread position:
               
389-683
               

               
Cow position:
               
chr4:41096881-41097171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
390-683
               

               
Cow position:
               
chr4:11100692-11100400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
393-683
               

               
Cow position:
               
chr4:20091009-20091300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
58, 90
               

               
Conread position:
               
394-681
               

               
Cow position:
               
chr4:15055709-15056001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
394-681
               

               
Cow position:
               
chr4:20658467-20658190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
56, 133
               

               
Conread position:
               
394-681
               

               
Cow position:
               
chr4:22074187-22073901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
210, 55
               

               
Conread position:
               
394-683
               

               
Cow position:
               
chr4:46667568-46667858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
52, 88
               

               
Conread position:
               
394-683
               

               
Cow position:
               
chr4:62569604-62569884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
396-624
               

               
Cow position:
               
chr4:23309433-23309659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
396-642
               

               
Cow position:
               
chr4:31588124-31587870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
51, 211
               

               
Conread position:
               
396-681
               

               
Cow position:
               
chr4:26399699-26399984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
396-682
               

               
Cow position:
               
chr4:44733531-44733818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
396-683
               

               
Cow position:
               
chr4:16641727-16642018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
396-683
               

               
Cow position:
               
chr4:17257543-17257824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 41
               

               
Conread position:
               
396-683
               

               
Cow position:
               
chr4:33148199-33148482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
399-675
               

               
Cow position:
               
chr4:34222862-34223135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
400-683
               

               
Cow position:
               
chr4:16606263-16605975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
403-683
               

               
Cow position:
               
chr4:26548387-26548668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 139
               

               
Conread position:
               
403-684
               

               
Cow position:
               
chr4:25823103-25822819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 142
               

               
Conread position:
               
405-639
               

               
Cow position:
               
chr4:995080-994842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
405-654
               

               
Cow position:
               
chr4:55539935-55539683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 154
               

               
Conread position:
               
405-655
               

               
Cow position:
               
chr4:42960600-42960846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
103, 42
               

               
Conread position:
               
405-661
               

               
Cow position:
               
chr4:8677718-8677979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
405-671
               

               
Cow position:
               
chr4:27996693-27996957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
45, 78
               

               
Conread position:
               
405-683
               

               
Cow position:
               
chr4:19140919-19141202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
45, 236
               

               
Conread position:
               
405-683
               

               
Cow position:
               
chr4:45499101-45499371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
44, 134
               

               
Conread position:
               
405-683
               

               
Cow position:
               
chr4:51024080-51024358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
39, 29
               

               
Conread position:
               
405-684
               

               
Cow position:
               
chr4:51980069-51980352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
55, 186
               

               
Conread position:
               
406-656
               

               
Cow position:
               
chr4:6000515-6000261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
406-681
               

               
Cow position:
               
chr4:37948019-37947747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
406-683
               

               
Cow position:
               
chr4:64875109-64874827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
406-684
               

               
Cow position:
               
chr4:7583128-7583422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
407-671
               

               
Cow position:
               
chr4:9712644-9712911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 150
               

               
Conread position:
               
411-683
               

               
Cow position:
               
chr4:17473010-17473280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
411-683
               

               
Cow position:
               
chr4:49906971-49907241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
46, 116
               

               
Conread position:
               
412-681
               

               
Cow position:
               
chr4:60625604-60625340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
413-562
               

               
Cow position:
               
chr4:23032388-23032237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
414-680
               

               
Cow position:
               
chr4:52696182-52696446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
414-681
               

               
Cow position:
               
chr4:22492201-22492471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 248
               

               
Conread position:
               
414-681
               

               
Cow position:
               
chr4:61710299-61710037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 109
               

               
Conread position:
               
415-681
               

               
Cow position:
               
chr4:9169166-9168897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 184
               

               
Conread position:
               
416-682
               

               
Cow position:
               
chr4:54162135-54161864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
417-681
               

               
Cow position:
               
chr4:21857403-21857150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
187, 16
               

               
Conread position:
               
417-681
               

               
Cow position:
               
chr4:38180688-38180952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
417-681
               

               
Cow position:
               
chr4:42923250-42922985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
33, 142
               

               
Conread position:
               
418-579
               

               
Cow position:
               
chr4:49697177-49697013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
32, 141
               

               
Conread position:
               
418-629
               

               
Cow position:
               
chr4:4116624-4116837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
418-661
               

               
Cow position:
               
chr4:49002458-49002705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
92, 22
               

               
Conread position:
               
418-664
               

               
Cow position:
               
chr4:24134763-24134521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
131, 51
               

               
Conread position:
               
418-672
               

               
Cow position:
               
chr4:39233759-39233501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
43, 109
               

               
Conread position:
               
418-674
               

               
Cow position:
               
chr4:19033580-19033832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 135
               

               
Conread position:
               
418-681
               

               
Cow position:
               
chr4:38972552-38972822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
32, 231
               

               
Conread position:
               
418-682
               

               
Cow position:
               
chr4:58834229-58833975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
418-683
               

               
Cow position:
               
chr4:9648999-9649273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
418-683
               

               
Cow position:
               
chr4:52252445-52252706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
418-684
               

               
Cow position:
               
chr4:18184902-18185167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
418-684
               

               
Cow position:
               
chr4:57556698-57556946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
186, 35
               

               
Conread position:
               
418-684
               

               
Cow position:
               
chr4:61236213-61235947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
419-587
               

               
Cow position:
               
chr4:19206626-19206799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
419-591
               

               
Cow position:
               
chr4:39840636-39840823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
32, 104
               

               
Conread position:
               
419-615
               

               
Cow position:
               
chr4:27881823-27882024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
419-624
               

               
Cow position:
               
chr4:59555326-59555116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
419-633
               

               
Cow position:
               
chr4:28739498-28739716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
32, 171
               

               
Conread position:
               
419-638
               

               
Cow position:
               
chr4:46198135-46197925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
419-644
               

               
Cow position:
               
chr4:12743353-12743579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 134
               

               
Conread position:
               
419-646
               

               
Cow position:
               
chr4:8649008-8649236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 30
               

               
Conread position:
               
419-648
               

               
Cow position:
               
chr4:52960786-52960557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
419-653
               

               
Cow position:
               
chr4:33563881-33564125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
419-656
               

               
Cow position:
               
chr4:61984438-61984198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 110
               

               
Conread position:
               
419-667
               

               
Cow position:
               
chr4:9105377-9105623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
31, 102
               

               
Conread position:
               
419-668
               

               
Cow position:
               
chr4:49986106-49985861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
30, 95
               

               
Conread position:
               
419-669
               

               
Cow position:
               
chr4:67756981-67757228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
419-671
               

               
Cow position:
               
chr4:15873703-15873451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
31, 171
               

               
Conread position:
               
419-671
               

               
Cow position:
               
chr4:36811952-36812202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
419-671
               

               
Cow position:
               
chr4:45654241-45653986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 195
               

               
Conread position:
               
419-671
               

               
Cow position:
               
chr4:46491871-46492127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
419-671
               

               
Cow position:
               
chr4:58291672-58291927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
419-671
               

               
Cow position:
               
chr4:59119164-59118918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 66
               

               
Conread position:
               
419-673
               

               
Cow position:
               
chr4:33645544-33645309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
184, 26
               

               
Conread position:
               
419-675
               

               
Cow position:
               
chr4:17586205-17585942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
419-675
               

               
Cow position:
               
chr4:59355974-59355705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 147
               

               
Conread position:
               
419-678
               

               
Cow position:
               
chr4:62150681-62150933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
34, 126
               

               
Conread position:
               
419-679
               

               
Cow position:
               
chr4:5575118-5575373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
419-680
               

               
Cow position:
               
chr4:5914257-5914524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
419-680
               

               
Cow position:
               
chr4:58483681-58483942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
185, 154
               

               
Conread position:
               
419-681
               

               
Cow position:
               
chr4:10614261-10613994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
419-681
               

               
Cow position:
               
chr4:15802908-15802641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
419-681
               

               
Cow position:
               
chr4:17234952-17235218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
31, 212
               

               
Conread position:
               
419-681
               

               
Cow position:
               
chr4:34181805-34181552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
419-681
               

               
Cow position:
               
chr4:65198870-65198603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
419-682
               

               
Cow position:
               
chr4:6806238-6806506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
419-682
               

               
Cow position:
               
chr4:17752003-17751743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 211
               

               
Conread position:
               
419-682
               

               
Cow position:
               
chr4:30287121-30287378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
419-682
               

               
Cow position:
               
chr4:33496493-33496758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
419-683
               

               
Cow position:
               
chr4:2191364-2191094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
419-683
               

               
Cow position:
               
chr4:5980041-5979782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
419-683
               

               
Cow position:
               
chr4:10044836-10044569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
30, 248
               

               
Conread position:
               
419-683
               

               
Cow position:
               
chr4:10884571-10884838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
30, 143
               

               
Conread position:
               
419-683
               

               
Cow position:
               
chr4:17477233-17477494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
419-683
               

               
Cow position:
               
chr4:22025159-22024890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 102
               

               
Conread position:
               
419-683
               

               
Cow position:
               
chr4:25578531-25578794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
30, 70
               

               
Conread position:
               
419-683
               

               
Cow position:
               
chr4:35868125-35868387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
31, 126
               

               
Conread position:
               
419-683
               

               
Cow position:
               
chr4:36754716-36754984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
30, 198
               

               
Conread position:
               
419-683
               

               
Cow position:
               
chr4:44778262-44777992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
419-683
               

               
Cow position:
               
chr4:49744602-49744871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
419-683
               

               
Cow position:
               
chr4:58193709-58193966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 105
               

               
Conread position:
               
419-683
               

               
Cow position:
               
chr4:58688965-58688699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 125
               

               
Conread position:
               
419-683
               

               
Cow position:
               
chr4:58859672-58859407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
419-683
               

               
Cow position:
               
chr4:67767350-67767619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
419-684
               

               
Cow position:
               
chr4:6863300-6863034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 150
               

               
Conread position:
               
419-684
               

               
Cow position:
               
chr4:42639361-42639095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 117
               

               
Conread position:
               
419-684
               

               
Cow position:
               
chr4:44646817-44646546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
35, 161
               

               
Conread position:
               
419-684
               

               
Cow position:
               
chr4:44685339-44685072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
30, 109
               

               
Conread position:
               
419-684
               

               
Cow position:
               
chr4:48502777-48503043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
34, 105
               

               
Conread position:
               
419-684
               

               
Cow position:
               
chr4:60044331-60044067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 42
               

               
Conread position:
               
419-684
               

               
Cow position:
               
chr4:65416251-65415980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
420-590
               

               
Cow position:
               
chr4:56961911-56962085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
31, 134
               

               
Conread position:
               
420-645
               

               
Cow position:
               
chr4:1187422-1187196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
30, 111
               

               
Conread position:
               
420-671
               

               
Cow position:
               
chr4:23437549-23437295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 89
               

               
Conread position:
               
420-682
               

               
Cow position:
               
chr4:6168039-6167774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
29, 126
               

               
Conread position:
               
420-683
               

               
Cow position:
               
chr4:1935589-1935328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
420-683
               

               
Cow position:
               
chr4:23381098-23380829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
31, 70
               

               
Conread position:
               
421-656
               

               
Cow position:
               
chr4:12751297-12751537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
421-657
               

               
Cow position:
               
chr4:26745451-26745689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
25, 126
               

               
Conread position:
               
421-664
               

               
Cow position:
               
chr4:46530312-46530072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 60
               

               
Conread position:
               
421-671
               

               
Cow position:
               
chr4:33159-32912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
33, 89
               

               
Conread position:
               
421-680
               

               
Cow position:
               
chr4:65431214-65431467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 90
               

               
Conread position:
               
421-682
               

               
Cow position:
               
chr4:5611067-5610812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
186, 35
               

               
Conread position:
               
421-682
               

               
Cow position:
               
chr4:15463493-15463233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
421-682
               

               
Cow position:
               
chr4:67394160-67394425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 236
               

               
Conread position:
               
421-683
               

               
Cow position:
               
chr4:2601145-2601404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
421-683
               

               
Cow position:
               
chr4:22904617-22904889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
421-683
               

               
Cow position:
               
chr4:23452079-23451824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
183, 158
               

               
Conread position:
               
421-683
               

               
Cow position:
               
chr4:65816726-65816460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 210
               

               
Conread position:
               
421-684
               

               
Cow position:
               
chr4:24021195-24020923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
30, 144
               

               
Conread position:
               
422-684
               

               
Cow position:
               
chr4:27462333-27462591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
423-683
               

               
Cow position:
               
chr4:43896571-43896297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
423-683
               

               
Cow position:
               
chr4:61272650-61272390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
180, 141
               

               
Conread position:
               
424-660
               

               
Cow position:
               
chr4:22723880-22724115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 119
               

               
Conread position:
               
424-671
               

               
Cow position:
               
chr4:8559371-8559128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
424-680
               

               
Cow position:
               
chr4:6631372-6631109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
424-681
               

               
Cow position:
               
chr4:3971324-3971583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
25, 135
               

               
Conread position:
               
424-681
               

               
Cow position:
               
chr4:47079468-47079213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 153
               

               
Conread position:
               
424-683
               

               
Cow position:
               
chr4:42320968-42320707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
26, 196
               

               
Conread position:
               
425-646
               

               
Cow position:
               
chr4:25192940-25192721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 74
               

               
Conread position:
               
425-679
               

               
Cow position:
               
chr4:25878360-25878615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
24, 170
               

               
Conread position:
               
425-681
               

               
Cow position:
               
chr4:26325457-26325718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
425-683
               

               
Cow position:
               
chr4:11200805-11201067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 120
               

               
Conread position:
               
427-683
               

               
Cow position:
               
chr4:28150515-28150771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
22, 93
               

               
Conread position:
               
428-681
               

               
Cow position:
               
chr4:21504181-21503930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 140
               

               
Conread position:
               
432-683
               

               
Cow position:
               
chr4:1061918-1061668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
171, 154
               

               
Conread position:
               
447-667
               

               
Cow position:
               
chr4:59317018-59316800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
156, 184
               

               
Conread position:
               
447-683
               

               
Cow position:
               
chr4:23493940-23494164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
222, 86
               

               
Conread position:
               
448-669
               

               
Cow position:
               
chr4:45197116-45197337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
454-681
               

               
Cow position:
               
chr4:7329716-7329502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
463-577
               

               
Cow position:
               
chr4:38940328-38940214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
464-681
               

               
Cow position:
               
chr4:38932300-38932511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
89, 101
               

               
Conread position:
               
464-681
               

               
Cow position:
               
chr4:65207480-65207261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 106
               

               
Conread position:
               
464-684
               

               
Cow position:
               
chr4:10092989-10093204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
138, 90
               

               
Conread position:
               
465-667
               

               
Cow position:
               
chr4:29897692-29897495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
467-681
               

               
Cow position:
               
chr4:45239331-45239549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
58, 86
               

               
Conread position:
               
467-684
               

               
Cow position:
               
chr4:51014047-51014277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 74
               

               
Conread position:
               
468-684
               

               
Cow position:
               
chr4:66128297-66128068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
17, 168
               

               
Conread position:
               
469-681
               

               
Cow position:
               
chr4:43761642-43761858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
15, 68
               

               
Conread position:
               
471-684
               

               
Cow position:
               
chr4:63376785-63376996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
121, 65
               

               
Conread position:
               
472-625
               

               
Cow position:
               
chr4:5578834-5578680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
472-683
               

               
Cow position:
               
chr4:1500103-1499891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
472-683
               

               
Cow position:
               
chr4:41037816-41038025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
130, 81
               

               
Conread position:
               
472-683
               

               
Cow position:
               
chr4:52086145-52086357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
132, 16
               

               
Conread position:
               
472-683
               

               
Cow position:
               
chr4:55520341-55520553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
90, 49
               

               
Conread position:
               
473-675
               

               
Cow position:
               
chr4:48496666-48496869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
473-682
               

               
Cow position:
               
chr4:43840990-43840782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
111, 55
               

               
Conread position:
               
473-683
               

               
Cow position:
               
chr4:11918961-11918752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
131, 59
               

               
Conread position:
               
474-671
               

               
Cow position:
               
chr4:49886300-49886104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
130, 63
               

               
Conread position:
               
475-684
               

               
Cow position:
               
chr4:29528263-29528054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
100, 62
               

               
Conread position:
               
477-682
               

               
Cow position:
               
chr4:21364065-21364267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
478-659
               

               
Cow position:
               
chr4:50761167-50760987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
478-684
               

               
Cow position:
               
chr4:20586362-20586156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 76
               

               
Conread position:
               
480-671
               

               
Cow position:
               
chr4:60838174-60838366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
480-680
               

               
Cow position:
               
chr4:68066349-68066549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
124, 36
               

               
Conread position:
               
480-683
               

               
Cow position:
               
chr4:55509859-55509655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
483-668
               

               
Cow position:
               
chr4:32438352-32438541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
483-669
               

               
Cow position:
               
chr4:32000559-32000748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
47, 38
               

               
Conread position:
               
483-683
               

               
Cow position:
               
chr4:20630417-20630613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
54, 58
               

               
Conread position:
               
483-683
               

               
Cow position:
               
chr4:33399474-33399272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
487-683
               

               
Cow position:
               
chr4:60775463-60775654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 124
               

               
Conread position:
               
488-659
               

               
Cow position:
               
chr4:44633294-44633468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
113, 5
               

               
Conread position:
               
488-684
               

               
Cow position:
               
chr4:15118984-15119186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
490-668
               

               
Cow position:
               
chr4:44789724-44789905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
37, 67
               

               
Conread position:
               
490-682
               

               
Cow position:
               
chr4:28848300-28848489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
114, 39
               

               
Conread position:
               
490-683
               

               
Cow position:
               
chr4:14817728-14817535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
114, 49
               

               
Conread position:
               
491-684
               

               
Cow position:
               
chr4:10872336-10872143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 65
               

               
Conread position:
               
494-660
               

               
Cow position:
               
chr4:8559996-8559828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
495-660
               

               
Cow position:
               
chr4:6445772-6445937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
40, 46
               

               
Conread position:
               
495-671
               

               
Cow position:
               
chr4:68386536-68386711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
109, 7
               

               
Conread position:
               
495-681
               

               
Cow position:
               
chr4:1006904-1007090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
109, 48
               

               
Conread position:
               
495-681
               

               
Cow position:
               
chr4:7806179-7806366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
495-681
               

               
Cow position:
               
chr4:8858294-8858477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 99
               

               
Conread position:
               
495-682
               

               
Cow position:
               
chr4:533301-533489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
495-682
               

               
Cow position:
               
chr4:3449813-3450001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
495-682
               

               
Cow position:
               
chr4:5882486-5882674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
495-682
               

               
Cow position:
               
chr4:33069828-33069641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
97, 101
               

               
Conread position:
               
495-683
               

               
Cow position:
               
chr4:3069920-3070109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
495-683
               

               
Cow position:
               
chr4:6035016-6034827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
495-683
               

               
Cow position:
               
chr4:31635495-31635306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
8, 53
               

               
Conread position:
               
495-683
               

               
Cow position:
               
chr4:38153289-38153100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
495-683
               

               
Cow position:
               
chr4:43898870-43898684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
496-681
               

               
Cow position:
               
chr4:48153297-48153112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
497-623
               

               
Cow position:
               
chr4:29034223-29034349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
497-683
               

               
Cow position:
               
chr4:54502277-54502093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
107, 98
               

               
Conread position:
               
499-684
               

               
Cow position:
               
chr4:46152421-46152235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
100, 54
               

               
Conread position:
               
500-669
               

               
Cow position:
               
chr4:56369762-56369934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
500-682
               

               
Cow position:
               
chr4:61817388-61817205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
500-684
               

               
Cow position:
               
chr4:47253235-47253054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
104, 17
               

               
Conread position:
               
501-671
               

               
Cow position:
               
chr4:47774575-47774405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
104, 87
               

               
Conread position:
               
501-680
               

               
Cow position:
               
chr4:52648385-52648561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
103, 37
               

               
Conread position:
               
502-683
               

               
Cow position:
               
chr4:55954395-55954574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
102, 33
               

               
Conread position:
               
504-657
               

               
Cow position:
               
chr4:4242054-4242203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
100, 30
               

               
Conread position:
               
504-682
               

               
Cow position:
               
chr4:3128875-3129054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
504-683
               

               
Cow position:
               
chr4:59452498-59452318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
508-667
               

               
Cow position:
               
chr4:14795444-14795596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
508-684
               

               
Cow position:
               
chr4:66900630-66900807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
509-681
               

               
Cow position:
               
chr4:652052-652225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
509-681
               

               
Cow position:
               
chr4:9357263-9357436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
509-681
               

               
Cow position:
               
chr4:24179453-24179280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
509-681
               

               
Cow position:
               
chr4:45114370-45114193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
509-681
               

               
Cow position:
               
chr4:54170447-54170623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
75, 131
               

               
Conread position:
               
509-681
               

               
Cow position:
               
chr4:64155753-64155926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
509-682
               

               
Cow position:
               
chr4:162106-162279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
95, 58
               

               
Conread position:
               
509-682
               

               
Cow position:
               
chr4:5441636-5441462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
509-682
               

               
Cow position:
               
chr4:8700164-8700337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
95, 133
               

               
Conread position:
               
509-682
               

               
Cow position:
               
chr4:14163811-14163985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
95, 154
               

               
Conread position:
               
509-682
               

               
Cow position:
               
chr4:24139898-24140074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
28, 32
               

               
Conread position:
               
509-682
               

               
Cow position:
               
chr4:30474404-30474578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
509-682
               

               
Cow position:
               
chr4:46744384-46744219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 30
               

               
Conread position:
               
509-682
               

               
Cow position:
               
chr4:48732701-48732875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
509-682
               

               
Cow position:
               
chr4:62453963-62453789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
509-682
               

               
Cow position:
               
chr4:63195554-63195381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
95, 87
               

               
Conread position:
               
509-683
               

               
Cow position:
               
chr4:17821555-17821730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
509-683
               

               
Cow position:
               
chr4:22743414-22743583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
509-683
               

               
Cow position:
               
chr4:39421620-39421795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
509-683
               

               
Cow position:
               
chr4:44593377-44593203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 32
               

               
Conread position:
               
509-683
               

               
Cow position:
               
chr4:46526099-46526273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
94, 104
               

               
Conread position:
               
509-683
               

               
Cow position:
               
chr4:54758230-54758055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
512-681
               

               
Cow position:
               
chr4:11217782-11217952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
512-681
               

               
Cow position:
               
chr4:21045133-21044963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
512-683
               

               
Cow position:
               
chr4:3961868-3961696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
512-683
               

               
Cow position:
               
chr4:47269195-47269367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
25, 29
               

               
Conread position:
               
513-664
               

               
Cow position:
               
chr4:25971962-25972115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
88, 8
               

               
Conread position:
               
513-681
               

               
Cow position:
               
chr4:48798630-48798466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
513-683
               

               
Cow position:
               
chr4:11026186-11026023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
514-681
               

               
Cow position:
               
chr4:14642364-14642532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
514-681
               

               
Cow position:
               
chr4:14684241-14684409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
515-683
               

               
Cow position:
               
chr4:22014389-22014222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 78
               

               
Conread position:
               
516-681
               

               
Cow position:
               
chr4:10993250-10993083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
517-684
               

               
Cow position:
               
chr4:9291833-9291996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
6, 59
               

               
Conread position:
               
517-684
               

               
Cow position:
               
chr4:22102321-22102153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
518-683
               

               
Cow position:
               
chr4:42863203-42863360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
521-670
               

               
Cow position:
               
chr4:670614-670464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
521-670
               

               
Cow position:
               
chr4:63062146-63061995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
521-681
               

               
Cow position:
               
chr4:61400315-61400153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 67
               

               
Conread position:
               
523-682
               

               
Cow position:
               
chr4:26131197-26131357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
523-683
               

               
Cow position:
               
chr4:61065715-61065871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 19
               

               
Conread position:
               
523-684
               

               
Cow position:
               
chr4:32839461-32839299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
524-681
               

               
Cow position:
               
chr4:23508239-23508398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
527-681
               

               
Cow position:
               
chr4:11872806-11872652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
531-684
               

               
Cow position:
               
chr4:19790170-19790325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
540-681
               

               
Cow position:
               
chr4:7139310-7139168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
540-684
               

               
Cow position:
               
chr4:58802871-58802733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
543-683
               

               
Cow position:
               
chr4:16735372-16735512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
546-682
               

               
Cow position:
               
chr4:4924210-4924073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
549-681
               

               
Cow position:
               
chr4:6547624-6547491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
550-683
               

               
Cow position:
               
chr4:67652366-67652232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
54, 113
               

               
Conread position:
               
564-684
               

               
Cow position:
               
chr4:61721695-61721579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
577-684
               

               
Cow position:
               
chr4:22565010-22565118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               
Show alignments to all cow chromosomes.