Cow genome map

Conread name: Ss1.1-Pig4-TMW8036O21.3

Conread position: 1-128
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 62, 13

Conread position: 1-128
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 63, 13

Conread position: 1-337
Cow position:
Alignm length: 339
Alignm identity: 226
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 63, 119

Conread position: 1-412
Cow position:
Alignm length: 417
Alignm identity: 276
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 63, 79

Conread position: 2-135
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 63, 18

Conread position: 3-128
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 61, 11

Conread position: 3-128
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 11

Conread position: 3-129
Cow position:
Alignm length: 127
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 3-129
Cow position:
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 3-315
Cow position:
Alignm length: 320
Alignm identity: 209
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 61, 25

Conread position: 4-124
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 4-128
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 46

Conread position: 4-349
Cow position:
Alignm length: 353
Alignm identity: 235
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 88

Conread position: 4-397
Cow position:
Alignm length: 399
Alignm identity: 257
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 107

Conread position: 7-128
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 8-128
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 41

Conread position: 8-137
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 54, 106

Conread position: 8-395
Cow position:
Alignm length: 406
Alignm identity: 267
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 56, 130

Conread position: 9-126
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 9-128
Cow position:
Alignm length: 121
Alignm identity: 96
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 55, 105

Conread position: 10-332
Cow position:
Alignm length: 330
Alignm identity: 227
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 66

Conread position: 10-397
Cow position:
Alignm length: 399
Alignm identity: 268
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 54, 105

Conread position: 10-397
Cow position:
Alignm length: 394
Alignm identity: 261
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 11

Conread position: 11-128
Cow position:
Alignm length: 119
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 11-128
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 11-395
Cow position:
Alignm length: 390
Alignm identity: 272
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 19, 55

Conread position: 14-387
Cow position:
Alignm length: 388
Alignm identity: 264
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 9, 94

Conread position: 20-409
Cow position:
Alignm length: 402
Alignm identity: 255
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 174

Conread position: 21-128
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 21-353
Cow position:
Alignm length: 341
Alignm identity: 225
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 43, 11

Conread position: 22-397
Cow position:
Alignm length: 399
Alignm identity: 268
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 42, 27

Conread position: 202-410
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 13

Conread position: 203-397
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 64, 56

Conread position: 207-402
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 97

Conread position: 208-408
Cow position:
Alignm length: 202
Alignm identity: 150
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 178, 39

Conread position: 211-349
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 213-395
Cow position:
Alignm length: 188
Alignm identity: 144
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 45, 135

Conread position: 213-397
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 79, 27

Conread position: 214-337
Cow position:
Alignm length: 126
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 214-341
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 214-347
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 214-348
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 214-351
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 48

Conread position: 214-356
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 214-361
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 102

Conread position: 214-374
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 214-377
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 214-377
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 155

Conread position: 214-384
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 111

Conread position: 214-387
Cow position:
Alignm length: 180
Alignm identity: 141
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 214-389
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 84

Conread position: 214-393
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 45, 83

Conread position: 214-393
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 98

Conread position: 214-393
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 111

Conread position: 214-395
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 43, 134

Conread position: 214-395
Cow position:
Alignm length: 183
Alignm identity: 140
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 172, 47

Conread position: 214-395
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 138, 41

Conread position: 214-395
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 133

Conread position: 214-397
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 124

Conread position: 214-397
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 85

Conread position: 214-397
Cow position:
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 214-397
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 73

Conread position: 214-397
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 104

Conread position: 214-397
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 75

Conread position: 214-397
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 60, 134

Conread position: 214-397
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 57

Conread position: 214-397
Cow position:
Alignm length: 184
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 88, 0

Conread position: 214-397
Cow position:
Alignm length: 188
Alignm identity: 146
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 75

Conread position: 214-397
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 172, 45

Conread position: 214-400
Cow position:
Alignm length: 192
Alignm identity: 145
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 45, 16

Conread position: 214-402
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 64

Conread position: 214-409
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 120

Conread position: 214-410
Cow position:
Alignm length: 203
Alignm identity: 156
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 47, 132

Conread position: 214-412
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 132

Conread position: 214-412
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 172, 45

Conread position: 214-414
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 90

Conread position: 214-415
Cow position:
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 57

Conread position: 214-441
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 231

Conread position: 215-348
Cow position:
Alignm length: 137
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 215-360
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 215-395
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 170, 101

Conread position: 215-397
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 129, 75

Conread position: 215-397
Cow position:
Alignm length: 188
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 40

Conread position: 215-400
Cow position:
Alignm length: 190
Alignm identity: 141
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 41, 15

Conread position: 215-412
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 100

Conread position: 216-350
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 10

Conread position: 216-393
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 216-395
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 170, 44

Conread position: 216-396
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 80

Conread position: 216-397
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 216-397
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 216-397
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 128

Conread position: 216-400
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 43, 6

Conread position: 216-403
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 104

Conread position: 217-348
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 217-350
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 79

Conread position: 217-351
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 217-393
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 71

Conread position: 217-393
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 46, 15

Conread position: 217-397
Cow position:
Alignm length: 183
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 127, 153

Conread position: 217-397
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 169, 109

Conread position: 217-397
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 129

Conread position: 217-397
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 58, 100

Conread position: 218-402
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 101

Conread position: 219-393
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 39, 94

Conread position: 219-395
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 11

Conread position: 220-347
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 220-349
Cow position:
Alignm length: 135
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 220-397
Cow position:
Alignm length: 189
Alignm identity: 146
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 220-397
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 129

Conread position: 221-395
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 222-395
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 163, 37

Conread position: 224-382
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 122

Conread position: 224-397
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 52

Conread position: 224-412
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 138

Conread position: 227-395
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 114

Conread position: 227-400
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 114

Conread position: 227-400
Cow position:
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 117, 0

Conread position: 228-399
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 15

Conread position: 230-389
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 103

Conread position: 230-397
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 69, 44

Conread position: 230-417
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 119

Conread position: 232-412
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 233-397
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 152, 27

Conread position: 250-406
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 94

Conread position: 256-397
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 130, 39

Conread position: 262-397
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 80

Conread position: 272-412
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 304-400
Cow position:
Alignm length: 98
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 81, 0

Show alignments to all cow chromosomes.