Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8036O21.3 |
| Conread position: | 1-105 |
| Cow position: | chr14:18717139-18717243 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 14 |
| Conread position: | 1-111 |
| Cow position: | chr14:38411133-38411243 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 63, 13 |
| Conread position: | 1-128 |
| Cow position: | chr14:6389055-6388927 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 13 |
| Conread position: | 1-128 |
| Cow position: | chr14:30023373-30023239 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-139 |
| Cow position: | chr14:12512065-12511928 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 16, 95 |
| Conread position: | 1-397 |
| Cow position: | chr14:15518576-15518179 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 63, 142 |
| Conread position: | 2-342 |
| Cow position: | chr14:6226811-6226474 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 3-116 |
| Cow position: | chr14:37152105-37151992 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 3-128 |
| Cow position: | chr14:5044505-5044629 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 39 |
| Conread position: | 3-128 |
| Cow position: | chr14:11981293-11981425 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 3-128 |
| Cow position: | chr14:27364406-27364538 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 3-129 |
| Cow position: | chr14:12244552-12244426 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 3-139 |
| Cow position: | chr14:49940841-49940979 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 136 |
| Conread position: | 3-397 |
| Cow position: | chr14:26442518-26442134 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 80 |
| Conread position: | 4-116 |
| Cow position: | chr14:18559228-18559114 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 6-128 |
| Cow position: | chr14:18270192-18270319 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 9-128 |
| Cow position: | chr14:35421252-35421125 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 10-392 |
| Cow position: | chr14:24981280-24981653 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 10-412 |
| Cow position: | chr14:24387287-24387671 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 270 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 54, 38 |
| Conread position: | 10-412 |
| Cow position: | chr14:37884096-37883699 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 54, 38 |
| Conread position: | 12-128 |
| Cow position: | chr14:11079293-11079410 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 12-360 |
| Cow position: | chr14:21933506-21933170 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 12-397 |
| Cow position: | chr14:34200021-34199642 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 52, 147 |
| Conread position: | 14-128 |
| Cow position: | chr14:35503205-35503318 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 8 |
| Conread position: | 14-129 |
| Cow position: | chr14:36443177-36443059 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 14-397 |
| Cow position: | chr14:42330186-42330553 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 50, 87 |
| Conread position: | 15-353 |
| Cow position: | chr14:22941899-22941558 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 106 |
| Conread position: | 21-128 |
| Cow position: | chr14:27733455-27733565 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 21-397 |
| Cow position: | chr14:41966072-41966442 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 90 |
| Conread position: | 24-357 |
| Cow position: | chr14:41302993-41302664 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 40, 81 |
| Conread position: | 192-387 |
| Cow position: | chr14:40347159-40346970 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 66, 9 |
| Conread position: | 205-341 |
| Cow position: | chr14:11056719-11056588 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 210-392 |
| Cow position: | chr14:50027242-50027422 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 5, 18 |
| Conread position: | 213-351 |
| Cow position: | chr14:33341776-33341918 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 213-397 |
| Cow position: | chr14:20712669-20712485 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 213-397 |
| Cow position: | chr14:35420742-35420559 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 134 |
| Conread position: | 213-410 |
| Cow position: | chr14:38355206-38355397 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 6 |
| Conread position: | 214-337 |
| Cow position: | chr14:1978047-1977923 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 214-340 |
| Cow position: | chr14:4044701-4044826 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 214-348 |
| Cow position: | chr14:35503385-35503523 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 43, 86 |
| Conread position: | 214-349 |
| Cow position: | chr14:14316906-14317041 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 116 |
| Conread position: | 214-349 |
| Cow position: | chr14:20483434-20483298 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 214-350 |
| Cow position: | chr14:12511878-12511741 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 96 |
| Conread position: | 214-350 |
| Cow position: | chr14:20600410-20600546 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 214-350 |
| Cow position: | chr14:33309480-33309347 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 214-354 |
| Cow position: | chr14:19951591-19951734 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 214-377 |
| Cow position: | chr14:4877208-4877050 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 50, 129 |
| Conread position: | 214-382 |
| Cow position: | chr14:26191081-26190913 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 56, 115 |
| Conread position: | 214-389 |
| Cow position: | chr14:37447444-37447276 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 214-393 |
| Cow position: | chr14:1868360-1868187 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 214-393 |
| Cow position: | chr14:33643757-33643586 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 214-393 |
| Cow position: | chr14:41756287-41756464 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 171, 34 |
| Conread position: | 214-395 |
| Cow position: | chr14:1859590-1859418 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 214-395 |
| Cow position: | chr14:11820097-11819923 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 172, 45 |
| Conread position: | 214-395 |
| Cow position: | chr14:14622155-14621974 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 172, 125 |
| Conread position: | 214-395 |
| Cow position: | chr14:19851913-19851728 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 135 |
| Conread position: | 214-395 |
| Cow position: | chr14:27275184-27275368 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 86, 165 |
| Conread position: | 214-395 |
| Cow position: | chr14:28115164-28114986 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 51, 133 |
| Conread position: | 214-395 |
| Cow position: | chr14:33326372-33326192 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 55, 132 |
| Conread position: | 214-395 |
| Cow position: | chr14:36289778-36289600 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 93 |
| Conread position: | 214-396 |
| Cow position: | chr14:41210878-41211054 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 214-397 |
| Cow position: | chr14:6541701-6541508 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 214-397 |
| Cow position: | chr14:7482079-7482255 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 120 |
| Conread position: | 214-397 |
| Cow position: | chr14:8101813-8101991 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 96 |
| Conread position: | 214-397 |
| Cow position: | chr14:8754342-8754529 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 34, 141 |
| Conread position: | 214-397 |
| Cow position: | chr14:11043468-11043291 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 51, 105 |
| Conread position: | 214-397 |
| Cow position: | chr14:14580892-14581068 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 172, 57 |
| Conread position: | 214-397 |
| Cow position: | chr14:17841269-17841087 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 51, 133 |
| Conread position: | 214-397 |
| Cow position: | chr14:18904587-18904409 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 96 |
| Conread position: | 214-397 |
| Cow position: | chr14:19394384-19394562 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 172, 130 |
| Conread position: | 214-397 |
| Cow position: | chr14:19618728-19618550 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 75 |
| Conread position: | 214-397 |
| Cow position: | chr14:22966778-22966953 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 214-397 |
| Cow position: | chr14:30662012-30662186 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 214-397 |
| Cow position: | chr14:31734832-31734646 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 33, 136 |
| Conread position: | 214-397 |
| Cow position: | chr14:32452272-32452455 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 58, 135 |
| Conread position: | 214-397 |
| Cow position: | chr14:33828185-33828360 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 214-397 |
| Cow position: | chr14:36555132-36554953 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 214-397 |
| Cow position: | chr14:37151637-37151449 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 214-397 |
| Cow position: | chr14:38144084-38143910 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 172, 101 |
| Conread position: | 214-397 |
| Cow position: | chr14:41127920-41128094 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 214-400 |
| Cow position: | chr14:33247406-33247228 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 171, 45 |
| Conread position: | 214-400 |
| Cow position: | chr14:40165447-40165624 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 130 |
| Conread position: | 214-401 |
| Cow position: | chr14:19863410-19863229 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 49, 112 |
| Conread position: | 214-410 |
| Cow position: | chr14:19129529-19129722 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 44, 135 |
| Conread position: | 214-410 |
| Cow position: | chr14:24684109-24683912 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 92 |
| Conread position: | 214-411 |
| Cow position: | chr14:5630185-5630376 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 53, 129 |
| Conread position: | 214-411 |
| Cow position: | chr14:49021877-49021680 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 129, 63 |
| Conread position: | 214-412 |
| Cow position: | chr14:8786527-8786334 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 170, 130 |
| Conread position: | 214-417 |
| Cow position: | chr14:13006527-13006733 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 215-350 |
| Cow position: | chr14:48412858-48412720 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 44, 131 |
| Conread position: | 215-397 |
| Cow position: | chr14:20016683-20016500 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 37, 133 |
| Conread position: | 215-416 |
| Cow position: | chr14:25378472-25378271 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 41, 60 |
| Conread position: | 216-348 |
| Cow position: | chr14:35498480-35498343 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 216-397 |
| Cow position: | chr14:25231625-25231446 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 133 |
| Conread position: | 216-413 |
| Cow position: | chr14:41471944-41471744 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 112, 43 |
| Conread position: | 217-337 |
| Cow position: | chr14:3564310-3564429 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 217-349 |
| Cow position: | chr14:23424285-23424417 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 217-349 |
| Cow position: | chr14:23443046-23443178 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 217-350 |
| Cow position: | chr14:23591260-23591394 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 217-368 |
| Cow position: | chr14:45718238-45718087 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 217-370 |
| Cow position: | chr14:24785971-24786123 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 149, 41 |
| Conread position: | 217-393 |
| Cow position: | chr14:24991848-24992020 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 129 |
| Conread position: | 217-397 |
| Cow position: | chr14:11748882-11748715 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 217-397 |
| Cow position: | chr14:19221904-19222081 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 130 |
| Conread position: | 217-399 |
| Cow position: | chr14:20384959-20384782 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 124 |
| Conread position: | 217-402 |
| Cow position: | chr14:7270977-7270804 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 167, 45 |
| Conread position: | 219-402 |
| Cow position: | chr14:14280439-14280628 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 219-403 |
| Cow position: | chr14:39422565-39422383 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 40, 119 |
| Conread position: | 220-349 |
| Cow position: | chr14:46654514-46654385 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 46, 9 |
| Conread position: | 220-393 |
| Cow position: | chr14:38920982-38921147 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 20 |
| Conread position: | 220-393 |
| Cow position: | chr14:48740840-48740673 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 35 |
| Conread position: | 220-396 |
| Cow position: | chr14:37884381-37884213 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 32 |
| Conread position: | 220-397 |
| Cow position: | chr14:37435274-37435093 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 102 |
| Conread position: | 220-397 |
| Cow position: | chr14:47672855-47672683 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 95, 5 |
| Conread position: | 220-400 |
| Cow position: | chr14:21284651-21284832 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 38, 61 |
| Conread position: | 220-402 |
| Cow position: | chr14:28378388-28378576 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 220-421 |
| Cow position: | chr14:33830330-33830525 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 166, 41 |
| Conread position: | 221-397 |
| Cow position: | chr14:10858465-10858634 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 165, 81 |
| Conread position: | 221-397 |
| Cow position: | chr14:14187360-14187536 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 127 |
| Conread position: | 222-395 |
| Cow position: | chr14:12250165-12249996 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 37, 123 |
| Conread position: | 223-395 |
| Cow position: | chr14:11981669-11981854 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 224-395 |
| Cow position: | chr14:24236858-24237025 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 35, 75 |
| Conread position: | 226-401 |
| Cow position: | chr14:13809969-13810150 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 33, 153 |
| Conread position: | 227-336 |
| Cow position: | chr14:19513377-19513265 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 227-387 |
| Cow position: | chr14:6175620-6175774 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 227-397 |
| Cow position: | chr14:28090939-28090773 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 118 |
| Conread position: | 227-400 |
| Cow position: | chr14:10702798-10702628 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 119 |
| Conread position: | 228-339 |
| Cow position: | chr14:16761534-16761423 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 27, 77 |
| Conread position: | 230-389 |
| Cow position: | chr14:6419263-6419108 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 230-393 |
| Cow position: | chr14:45605127-45605295 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 136 |
| Conread position: | 230-395 |
| Cow position: | chr14:21964160-21964321 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 29, 41 |
| Conread position: | 232-350 |
| Cow position: | chr14:37467721-37467601 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 233-395 |
| Cow position: | chr14:34355652-34355494 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 7 |
| Conread position: | 253-393 |
| Cow position: | chr14:33538859-33538723 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 254-392 |
| Cow position: | chr14:24608031-24608163 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 131, 90 |
| Conread position: | 255-393 |
| Cow position: | chr14:42277012-42277147 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 256-407 |
| Cow position: | chr14:20640560-20640409 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 106, 113 |
| Conread position: | 256-412 |
| Cow position: | chr14:22952928-22952778 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 9, 98 |
| Conread position: | 261-397 |
| Cow position: | chr14:50055463-50055600 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 263-397 |
| Cow position: | chr14:7316901-7317035 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 123, 43 |
| Conread position: | 274-397 |
| Cow position: | chr14:5502077-5501953 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 278-395 |
| Cow position: | chr14:8936562-8936448 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 108, 66 |
Show alignments to all cow chromosomes.