Cow genome map

Conread name: Ss1.1-Pig4-TMW8036O21.3

Conread position: 1-105
Cow position:
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 14

Conread position: 1-111
Cow position:
Alignm length: 112
Alignm identity: 98
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 63, 13

Conread position: 1-128
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 13

Conread position: 1-128
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 1-139
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 95

Conread position: 1-397
Cow position:
Alignm length: 409
Alignm identity: 272
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 63, 142

Conread position: 2-342
Cow position:
Alignm length: 346
Alignm identity: 225
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 62, 19

Conread position: 3-116
Cow position:
Alignm length: 115
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 61, 17

Conread position: 3-128
Cow position:
Alignm length: 127
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 39

Conread position: 3-128
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 3-128
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 3-129
Cow position:
Alignm length: 128
Alignm identity: 104
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 61, 17

Conread position: 3-139
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 136

Conread position: 3-397
Cow position:
Alignm length: 404
Alignm identity: 257
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 80

Conread position: 4-116
Cow position:
Alignm length: 115
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 6-128
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 9-128
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 10-392
Cow position:
Alignm length: 390
Alignm identity: 262
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 36, 19

Conread position: 10-412
Cow position:
Alignm length: 409
Alignm identity: 270
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 54, 38

Conread position: 10-412
Cow position:
Alignm length: 414
Alignm identity: 264
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 38

Conread position: 12-128
Cow position:
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 12-360
Cow position:
Alignm length: 357
Alignm identity: 239
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 16

Conread position: 12-397
Cow position:
Alignm length: 393
Alignm identity: 259
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 52, 147

Conread position: 14-128
Cow position:
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 8

Conread position: 14-129
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 14-397
Cow position:
Alignm length: 389
Alignm identity: 260
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 87

Conread position: 15-353
Cow position:
Alignm length: 350
Alignm identity: 229
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 106

Conread position: 21-128
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 21-397
Cow position:
Alignm length: 391
Alignm identity: 259
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 90

Conread position: 24-357
Cow position:
Alignm length: 337
Alignm identity: 226
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 40, 81

Conread position: 192-387
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 66, 9

Conread position: 205-341
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 210-392
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 5, 18

Conread position: 213-351
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 213-397
Cow position:
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 9

Conread position: 213-397
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 134

Conread position: 213-410
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 6

Conread position: 214-337
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 214-340
Cow position:
Alignm length: 127
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 214-348
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 86

Conread position: 214-349
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 116

Conread position: 214-349
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 214-350
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 96

Conread position: 214-350
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 42, 77

Conread position: 214-350
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 214-354
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 214-377
Cow position:
Alignm length: 165
Alignm identity: 132
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 129

Conread position: 214-382
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 56, 115

Conread position: 214-389
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 214-393
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 49, 40

Conread position: 214-393
Cow position:
Alignm length: 180
Alignm identity: 142
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 122, 0

Conread position: 214-393
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 171, 34

Conread position: 214-395
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 49, 72

Conread position: 214-395
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 172, 45

Conread position: 214-395
Cow position:
Alignm length: 183
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 172, 125

Conread position: 214-395
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 135

Conread position: 214-395
Cow position:
Alignm length: 187
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 86, 165

Conread position: 214-395
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 51, 133

Conread position: 214-395
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 132

Conread position: 214-395
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 93

Conread position: 214-396
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 42, 82

Conread position: 214-397
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 214-397
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 120

Conread position: 214-397
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 96

Conread position: 214-397
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 34, 141

Conread position: 214-397
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 105

Conread position: 214-397
Cow position:
Alignm length: 185
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 172, 57

Conread position: 214-397
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 51, 133

Conread position: 214-397
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 96

Conread position: 214-397
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 172, 130

Conread position: 214-397
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 75

Conread position: 214-397
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 214-397
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 214-397
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 136

Conread position: 214-397
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 58, 135

Conread position: 214-397
Cow position:
Alignm length: 184
Alignm identity: 139
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 130, 0

Conread position: 214-397
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 72

Conread position: 214-397
Cow position:
Alignm length: 189
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 28, 0

Conread position: 214-397
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 172, 101

Conread position: 214-397
Cow position:
Alignm length: 184
Alignm identity: 139
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 214-400
Cow position:
Alignm length: 188
Alignm identity: 141
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 171, 45

Conread position: 214-400
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 130

Conread position: 214-401
Cow position:
Alignm length: 190
Alignm identity: 149
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 49, 112

Conread position: 214-410
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 44, 135

Conread position: 214-410
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 92

Conread position: 214-411
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 129

Conread position: 214-411
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 63

Conread position: 214-412
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 170, 130

Conread position: 214-417
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 16

Conread position: 215-350
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 44, 131

Conread position: 215-397
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 133

Conread position: 215-416
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 41, 60

Conread position: 216-348
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 216-397
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 133

Conread position: 216-413
Cow position:
Alignm length: 202
Alignm identity: 139
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 112, 43

Conread position: 217-337
Cow position:
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 217-349
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 217-349
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 217-350
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 43, 71

Conread position: 217-368
Cow position:
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 217-370
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 149, 41

Conread position: 217-393
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 129

Conread position: 217-397
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 13

Conread position: 217-397
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 130

Conread position: 217-399
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 124

Conread position: 217-402
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 167, 45

Conread position: 219-402
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 75

Conread position: 219-403
Cow position:
Alignm length: 189
Alignm identity: 146
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 40, 119

Conread position: 220-349
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 9

Conread position: 220-393
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 20

Conread position: 220-393
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 35

Conread position: 220-396
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 32

Conread position: 220-397
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 102

Conread position: 220-397
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 5

Conread position: 220-400
Cow position:
Alignm length: 186
Alignm identity: 149
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 61

Conread position: 220-402
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 220-421
Cow position:
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 166, 41

Conread position: 221-397
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 165, 81

Conread position: 221-397
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 127

Conread position: 222-395
Cow position:
Alignm length: 175
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 37, 123

Conread position: 223-395
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 224-395
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 75

Conread position: 226-401
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 153

Conread position: 227-336
Cow position:
Alignm length: 113
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 227-387
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 29

Conread position: 227-397
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 118

Conread position: 227-400
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 119

Conread position: 228-339
Cow position:
Alignm length: 114
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 27, 77

Conread position: 230-389
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 230-393
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 136

Conread position: 230-395
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 29, 41

Conread position: 232-350
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 233-395
Cow position:
Alignm length: 167
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 7

Conread position: 253-393
Cow position:
Alignm length: 141
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 254-392
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 131, 90

Conread position: 255-393
Cow position:
Alignm length: 139
Alignm identity: 113
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 256-407
Cow position:
Alignm length: 153
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 106, 113

Conread position: 256-412
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 98

Conread position: 261-397
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 263-397
Cow position:
Alignm length: 136
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 123, 43

Conread position: 274-397
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 278-395
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 66

Show alignments to all cow chromosomes.