Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8036O21.3 |
| Conread position: | 1-128 |
| Cow position: | chr17:7865082-7864949 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-128 |
| Cow position: | chr17:10414747-10414623 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 63, 14 |
| Conread position: | 1-128 |
| Cow position: | chr17:18673780-18673915 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-413 |
| Cow position: | chr17:11839978-11839565 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 63, 13 |
| Conread position: | 2-397 |
| Cow position: | chr17:27795910-27795522 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 284 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 62, 141 |
| Conread position: | 2-397 |
| Cow position: | chr17:38615216-38614837 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 63, 17 |
| Conread position: | 3-128 |
| Cow position: | chr17:7554011-7554139 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 17 |
| Conread position: | 3-128 |
| Cow position: | chr17:26448797-26448667 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 3-129 |
| Cow position: | chr17:12946106-12946228 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 60, 17 |
| Conread position: | 3-129 |
| Cow position: | chr17:18720199-18720323 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 3-135 |
| Cow position: | chr17:25473029-25473163 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 3-350 |
| Cow position: | chr17:21959430-21959764 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 61, 11 |
| Conread position: | 3-395 |
| Cow position: | chr17:20884779-20884406 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 262 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 61, 45 |
| Conread position: | 3-397 |
| Cow position: | chr17:8544582-8544187 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 48, 113 |
| Conread position: | 3-400 |
| Cow position: | chr17:9117935-9117525 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 277 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 61, 276 |
| Conread position: | 3-400 |
| Cow position: | chr17:33271414-33271809 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 276 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 10, 93 |
| Conread position: | 3-412 |
| Cow position: | chr17:15333432-15333847 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 62, 17 |
| Conread position: | 4-118 |
| Cow position: | chr17:6761601-6761714 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 60, 90 |
| Conread position: | 6-129 |
| Cow position: | chr17:24612894-24612774 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 6-411 |
| Cow position: | chr17:17410551-17410158 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 8-116 |
| Cow position: | chr17:8809259-8809368 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 8-128 |
| Cow position: | chr17:20157857-20157732 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 9-412 |
| Cow position: | chr17:31480783-31481172 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 10-124 |
| Cow position: | chr17:10820741-10820856 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 10-129 |
| Cow position: | chr17:22051344-22051466 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 10-393 |
| Cow position: | chr17:21738618-21738995 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 98 |
| Conread position: | 11-134 |
| Cow position: | chr17:9824912-9824787 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 9 |
| Conread position: | 12-346 |
| Cow position: | chr17:36275581-36275263 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 37 |
| Conread position: | 12-389 |
| Cow position: | chr17:14025661-14026026 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 21, 83 |
| Conread position: | 13-349 |
| Cow position: | chr17:4786237-4786572 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 129 |
| Conread position: | 16-397 |
| Cow position: | chr17:22032447-22032815 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 249 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 94, 48 |
| Conread position: | 18-394 |
| Cow position: | chr17:37699101-37699472 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 18-397 |
| Cow position: | chr17:40288736-40289117 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 151, 46 |
| Conread position: | 20-349 |
| Cow position: | chr17:1466179-1466506 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 25-400 |
| Cow position: | chr17:7132192-7132573 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 69 |
| Conread position: | 29-349 |
| Cow position: | chr17:10431736-10432053 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 35, 100 |
| Conread position: | 197-393 |
| Cow position: | chr17:27048231-27048044 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 189, 17 |
| Conread position: | 198-399 |
| Cow position: | chr17:9778317-9778125 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 188, 15 |
| Conread position: | 207-402 |
| Cow position: | chr17:18824859-18824666 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 6, 120 |
| Conread position: | 208-394 |
| Cow position: | chr17:979094-979272 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 51, 12 |
| Conread position: | 210-395 |
| Cow position: | chr17:13143623-13143807 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 5, 139 |
| Conread position: | 213-349 |
| Cow position: | chr17:38833104-38832966 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 213-397 |
| Cow position: | chr17:20992977-20993159 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 46, 7 |
| Conread position: | 213-412 |
| Cow position: | chr17:41030012-41029821 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 173, 46 |
| Conread position: | 214-321 |
| Cow position: | chr17:25126410-25126303 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 214-329 |
| Cow position: | chr17:7590403-7590514 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 214-339 |
| Cow position: | chr17:24883511-24883634 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 214-339 |
| Cow position: | chr17:25032422-25032550 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 214-349 |
| Cow position: | chr17:14652720-14652857 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 58, 47 |
| Conread position: | 214-350 |
| Cow position: | chr17:2275530-2275397 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 77, 45 |
| Conread position: | 214-350 |
| Cow position: | chr17:18860661-18860800 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 214-350 |
| Cow position: | chr17:20848583-20848445 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 80 |
| Conread position: | 214-350 |
| Cow position: | chr17:21489565-21489701 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 12 |
| Conread position: | 214-350 |
| Cow position: | chr17:27202986-27203121 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 214-369 |
| Cow position: | chr17:22056968-22057120 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 43, 73 |
| Conread position: | 214-377 |
| Cow position: | chr17:17682844-17683001 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 214-384 |
| Cow position: | chr17:1311410-1311243 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 63, 131 |
| Conread position: | 214-384 |
| Cow position: | chr17:11215168-11215334 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 13, 115 |
| Conread position: | 214-387 |
| Cow position: | chr17:21628538-21628369 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 53, 7 |
| Conread position: | 214-392 |
| Cow position: | chr17:5688301-5688469 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 214-393 |
| Cow position: | chr17:25502173-25501995 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 135 |
| Conread position: | 214-393 |
| Cow position: | chr17:29026131-29025939 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 62 |
| Conread position: | 214-395 |
| Cow position: | chr17:1783544-1783722 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 44, 98 |
| Conread position: | 214-395 |
| Cow position: | chr17:3471479-3471303 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 58 |
| Conread position: | 214-395 |
| Cow position: | chr17:6423824-6423638 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 38, 152 |
| Conread position: | 214-395 |
| Cow position: | chr17:7142921-7142747 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 172, 77 |
| Conread position: | 214-395 |
| Cow position: | chr17:8690381-8690559 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 53, 132 |
| Conread position: | 214-395 |
| Cow position: | chr17:9746576-9746401 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 43, 133 |
| Conread position: | 214-395 |
| Cow position: | chr17:11215828-11216008 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 45, 131 |
| Conread position: | 214-395 |
| Cow position: | chr17:14060714-14060893 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 214-395 |
| Cow position: | chr17:20874456-20874273 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 59, 134 |
| Conread position: | 214-395 |
| Cow position: | chr17:21755372-21755553 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 34, 39 |
| Conread position: | 214-395 |
| Cow position: | chr17:32027393-32027575 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 134 |
| Conread position: | 214-397 |
| Cow position: | chr17:923939-923759 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 70 |
| Conread position: | 214-397 |
| Cow position: | chr17:1113948-1113766 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 172, 61 |
| Conread position: | 214-397 |
| Cow position: | chr17:6329175-6328993 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 131 |
| Conread position: | 214-397 |
| Cow position: | chr17:6624316-6624139 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 30, 39 |
| Conread position: | 214-397 |
| Cow position: | chr17:9854044-9853871 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 171, 45 |
| Conread position: | 214-397 |
| Cow position: | chr17:11156433-11156614 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 137, 81 |
| Conread position: | 214-397 |
| Cow position: | chr17:14762062-14762238 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 214-397 |
| Cow position: | chr17:15664737-15664549 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 84 |
| Conread position: | 214-397 |
| Cow position: | chr17:18146245-18146067 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 62, 132 |
| Conread position: | 214-397 |
| Cow position: | chr17:18720387-18720572 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 50, 134 |
| Conread position: | 214-397 |
| Cow position: | chr17:22564248-22564062 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 136 |
| Conread position: | 214-397 |
| Cow position: | chr17:24077463-24077282 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 51, 131 |
| Conread position: | 214-397 |
| Cow position: | chr17:24149244-24149062 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 58, 132 |
| Conread position: | 214-397 |
| Cow position: | chr17:24550237-24550055 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 51, 132 |
| Conread position: | 214-397 |
| Cow position: | chr17:24761168-24761347 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 129 |
| Conread position: | 214-397 |
| Cow position: | chr17:30529485-30529660 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 172, 45 |
| Conread position: | 214-397 |
| Cow position: | chr17:33410955-33411141 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 136 |
| Conread position: | 214-397 |
| Cow position: | chr17:38362923-38363103 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 135 |
| Conread position: | 214-397 |
| Cow position: | chr17:40771896-40771716 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 45, 131 |
| Conread position: | 214-397 |
| Cow position: | chr17:41289962-41290139 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 44, 91 |
| Conread position: | 214-398 |
| Cow position: | chr17:34948698-34948519 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 59 |
| Conread position: | 214-399 |
| Cow position: | chr17:20839506-20839682 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 172, 46 |
| Conread position: | 214-400 |
| Cow position: | chr17:12591229-12591045 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 42, 134 |
| Conread position: | 214-400 |
| Cow position: | chr17:21335632-21335816 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 34, 68 |
| Conread position: | 214-402 |
| Cow position: | chr17:6848857-6848674 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 165, 44 |
| Conread position: | 214-403 |
| Cow position: | chr17:1035537-1035721 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 130 |
| Conread position: | 214-404 |
| Cow position: | chr17:25916955-25916771 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 57 |
| Conread position: | 214-409 |
| Cow position: | chr17:8079372-8079184 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 162, 51 |
| Conread position: | 214-410 |
| Cow position: | chr17:21292982-21293174 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 76 |
| Conread position: | 214-412 |
| Cow position: | chr17:11101743-11101930 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 214-412 |
| Cow position: | chr17:13922541-13922339 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 157 |
| Conread position: | 214-412 |
| Cow position: | chr17:27058497-27058689 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 164, 126 |
| Conread position: | 214-412 |
| Cow position: | chr17:28540090-28539897 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 50, 132 |
| Conread position: | 214-418 |
| Cow position: | chr17:15684569-15684364 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 62, 49 |
| Conread position: | 215-349 |
| Cow position: | chr17:1469438-1469300 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 44, 114 |
| Conread position: | 215-349 |
| Cow position: | chr17:17193551-17193417 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 69, 98 |
| Conread position: | 215-350 |
| Cow position: | chr17:30718359-30718496 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 75 |
| Conread position: | 215-395 |
| Cow position: | chr17:39857449-39857276 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 215-397 |
| Cow position: | chr17:11618647-11618465 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 41, 133 |
| Conread position: | 215-397 |
| Cow position: | chr17:12059033-12059210 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 132 |
| Conread position: | 215-397 |
| Cow position: | chr17:24580235-24580415 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 43, 61 |
| Conread position: | 215-410 |
| Cow position: | chr17:12108863-12108671 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 48, 57 |
| Conread position: | 215-412 |
| Cow position: | chr17:25189348-25189143 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 216-394 |
| Cow position: | chr17:7654394-7654568 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 48, 132 |
| Conread position: | 216-395 |
| Cow position: | chr17:9565365-9565192 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 88 |
| Conread position: | 216-396 |
| Cow position: | chr17:31856731-31856545 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 216-402 |
| Cow position: | chr17:11832057-11832243 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 76 |
| Conread position: | 217-348 |
| Cow position: | chr17:27765330-27765194 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 217-387 |
| Cow position: | chr17:20306107-20305940 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 42 |
| Conread position: | 217-392 |
| Cow position: | chr17:10458879-10459051 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 128 |
| Conread position: | 217-393 |
| Cow position: | chr17:5381937-5382107 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 50, 38 |
| Conread position: | 217-393 |
| Cow position: | chr17:11921217-11921397 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 40, 136 |
| Conread position: | 217-396 |
| Cow position: | chr17:18884273-18884461 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 39, 132 |
| Conread position: | 217-397 |
| Cow position: | chr17:30359527-30359350 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 159, 48 |
| Conread position: | 217-400 |
| Cow position: | chr17:1295514-1295693 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 168, 125 |
| Conread position: | 217-401 |
| Cow position: | chr17:30734237-30734415 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 217-409 |
| Cow position: | chr17:25122351-25122542 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 47, 70 |
| Conread position: | 217-410 |
| Cow position: | chr17:19999194-19999001 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 56, 38 |
| Conread position: | 217-412 |
| Cow position: | chr17:20780566-20780374 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 145, 152 |
| Conread position: | 219-397 |
| Cow position: | chr17:11056314-11056490 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 126 |
| Conread position: | 219-412 |
| Cow position: | chr17:42347169-42347357 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 220-349 |
| Cow position: | chr17:21495432-21495300 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 220-382 |
| Cow position: | chr17:40893205-40893040 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 220-393 |
| Cow position: | chr17:13243991-13244156 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 156, 35 |
| Conread position: | 220-393 |
| Cow position: | chr17:32278854-32279028 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 142, 32 |
| Conread position: | 220-393 |
| Cow position: | chr17:32280718-32280544 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 142, 32 |
| Conread position: | 220-396 |
| Cow position: | chr17:30665326-30665152 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 126 |
| Conread position: | 220-397 |
| Cow position: | chr17:267531-267707 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 39, 72 |
| Conread position: | 220-400 |
| Cow position: | chr17:24587678-24587500 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 124 |
| Conread position: | 220-402 |
| Cow position: | chr17:5246948-5246771 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 100 |
| Conread position: | 220-412 |
| Cow position: | chr17:1353451-1353260 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 61 |
| Conread position: | 221-402 |
| Cow position: | chr17:4824542-4824372 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 165, 38 |
| Conread position: | 222-396 |
| Cow position: | chr17:20932383-20932211 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 34, 125 |
| Conread position: | 222-400 |
| Cow position: | chr17:21437267-21437440 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 223-397 |
| Cow position: | chr17:32950326-32950157 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 224-355 |
| Cow position: | chr17:32017826-32017962 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 224-393 |
| Cow position: | chr17:21312759-21312926 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 35, 121 |
| Conread position: | 227-395 |
| Cow position: | chr17:35311474-35311309 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 17, 99 |
| Conread position: | 227-397 |
| Cow position: | chr17:25097509-25097344 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 228-413 |
| Cow position: | chr17:5224448-5224263 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 136 |
| Conread position: | 231-397 |
| Cow position: | chr17:26230997-26230824 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 232-395 |
| Cow position: | chr17:5895868-5896027 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 33, 89 |
| Conread position: | 241-397 |
| Cow position: | chr17:552930-553078 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 251-377 |
| Cow position: | chr17:25160133-25160263 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 256-393 |
| Cow position: | chr17:32651639-32651501 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 7, 91 |
| Conread position: | 256-397 |
| Cow position: | chr17:21874290-21874432 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 267-350 |
| Cow position: | chr17:3353887-3353804 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 75 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 303-395 |
| Cow position: | chr17:3387257-3387165 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 41 |
Show alignments to all cow chromosomes.